Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               49-266
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               54-389
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               54-469
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               55-493
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               90, 390
               

               Conread position:
               58-409
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 174
               

               Conread position:
               58-446
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               61-360
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 187
               

               Conread position:
               64-487
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 109
               

               Conread position:
               65-420
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               42, 125
               

               Conread position:
               67-499
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               68-417
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               69-310
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               70-409
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               70-409
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               70-435
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               70-503
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               71-303
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               138, 100
               

               Conread position:
               71-311
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               71-356
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               41, 173
               

               Conread position:
               71-381
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 165
               

               Conread position:
               71-382
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 61
               

               Conread position:
               71-447
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 170
               

               Conread position:
               72-301
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               49, 175
               

               Conread position:
               72-318
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               72-346
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               72-351
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 9
               

               Conread position:
               72-397
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               199, 52
               

               Conread position:
               72-444
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 164
               

               Conread position:
               72-451
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               72-456
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 174
               

               Conread position:
               72-479
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               288
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               9, 143
               

               Conread position:
               73-322
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 136
               

               Conread position:
               73-357
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               73-394
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 146
               

               Conread position:
               73-459
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               73-471
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               8, 175
               

               Conread position:
               74-361
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               82-367
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 160
               

               Conread position:
               82-376
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               213, 114
               

               Conread position:
               82-459
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               121-497
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 52
               

               Conread position:
               145-507
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               206-493
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               212-433
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               242-461
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-417
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               150, 94
               

               Conread position:
               269-409
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               292-504
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               305-457
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 91
               

               Conread position:
               346-486
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 22
               
Show alignments to all cow chromosomes.