Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               37-491
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               50-237
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               50-479
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               60-504
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               62-357
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               73, 107
               

               Conread position:
               63-260
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               63-461
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               64-396
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               71, 119
               

               Conread position:
               64-438
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               114, 107
               

               Conread position:
               65-487
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 188
               

               Conread position:
               67-364
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               67-497
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 183
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 106
               

               Conread position:
               68-229
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               70-435
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               70-467
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               70-503
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 177
               

               Conread position:
               71-306
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               71-357
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               64, 170
               

               Conread position:
               71-401
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               71-401
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               71-414
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 176
               

               Conread position:
               71-428
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               71-443
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               71-479
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 141
               

               Conread position:
               71-492
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               71-504
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 72
               

               Conread position:
               72-276
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               115, 86
               

               Conread position:
               72-284
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               72-312
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               72-361
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               72-394
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 171
               

               Conread position:
               72-479
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 175
               

               Conread position:
               72-479
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               72-504
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               73-325
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               73-456
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 78
               

               Conread position:
               74-351
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 165
               

               Conread position:
               75-435
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               81-503
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               82-435
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 165
               

               Conread position:
               82-479
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 157
               

               Conread position:
               111-431
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               145-455
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 101
               

               Conread position:
               215-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               207, 19
               

               Conread position:
               242-461
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               243-435
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               244-383
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               244-383
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               244-497
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 27
               

               Conread position:
               245-409
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               253-479
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 192
               

               Conread position:
               253-479
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               259-504
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               106, 159
               

               Conread position:
               267-504
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-448
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               271-470
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               181, 117
               

               Conread position:
               275-492
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 133
               

               Conread position:
               284-504
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               121, 200
               

               Conread position:
               330-490
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 47
               

               Conread position:
               333-499
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.