Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 37-491 |
| Cow position: | chr16:18054856-18054398 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 50-237 |
| Cow position: | chr16:56203205-56203012 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 50-479 |
| Cow position: | chr16:37225315-37225745 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 60-504 |
| Cow position: | chr16:12114356-12113945 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 62-357 |
| Cow position: | chr16:40502712-40503004 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 63-260 |
| Cow position: | chr16:30655611-30655411 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 63-461 |
| Cow position: | chr16:15681938-15682321 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 64-396 |
| Cow position: | chr16:40122382-40122036 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 71, 119 |
| Conread position: | 64-438 |
| Cow position: | chr16:4396890-4396507 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 65-487 |
| Cow position: | chr16:15434170-15433738 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 188 |
| Conread position: | 67-364 |
| Cow position: | chr16:49760142-49759848 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 67-497 |
| Cow position: | chr16:13924679-13925116 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 183 |
| Conread position: | 67-504 |
| Cow position: | chr16:54015057-54014624 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 106 |
| Conread position: | 68-229 |
| Cow position: | chr16:54305057-54304896 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 70-435 |
| Cow position: | chr16:34614215-34613848 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 70-467 |
| Cow position: | chr16:48889606-48889989 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 70-503 |
| Cow position: | chr16:21558437-21558000 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 177 |
| Conread position: | 71-306 |
| Cow position: | chr16:40517273-40517507 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 71-357 |
| Cow position: | chr16:9955244-9954957 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 64, 170 |
| Conread position: | 71-401 |
| Cow position: | chr16:16600218-16599886 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 171 |
| Conread position: | 71-401 |
| Cow position: | chr16:31531464-31531133 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 71-414 |
| Cow position: | chr16:23948438-23948096 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 71-428 |
| Cow position: | chr16:3850299-3850637 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 71-443 |
| Cow position: | chr16:19491255-19491609 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 71-479 |
| Cow position: | chr16:29661693-29661296 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 141 |
| Conread position: | 71-492 |
| Cow position: | chr16:2250216-2249794 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 71-504 |
| Cow position: | chr16:40516269-40516692 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 72 |
| Conread position: | 72-276 |
| Cow position: | chr16:35281470-35281272 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 72-284 |
| Cow position: | chr16:19910237-19910442 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 72-312 |
| Cow position: | chr16:54017333-54017089 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 72-361 |
| Cow position: | chr16:49979393-49979099 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 72-394 |
| Cow position: | chr16:33440175-33439852 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 171 |
| Conread position: | 72-479 |
| Cow position: | chr16:47743347-47742933 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 72-479 |
| Cow position: | chr16:49208219-49208620 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 281 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 72-504 |
| Cow position: | chr16:29626025-29626455 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 73-325 |
| Cow position: | chr16:11172124-11171868 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 73-456 |
| Cow position: | chr16:56079088-56078705 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 78 |
| Conread position: | 74-351 |
| Cow position: | chr16:31529426-31529142 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 165 |
| Conread position: | 75-435 |
| Cow position: | chr16:47871146-47871508 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 68 |
| Conread position: | 81-503 |
| Cow position: | chr16:27274780-27275198 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 82-435 |
| Cow position: | chr16:24173414-24173772 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 165 |
| Conread position: | 82-479 |
| Cow position: | chr16:53198116-53198517 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 111-431 |
| Cow position: | chr16:33644063-33644385 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 145-455 |
| Cow position: | chr16:15668898-15669206 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 215-504 |
| Cow position: | chr16:17749331-17749609 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 207, 19 |
| Conread position: | 242-461 |
| Cow position: | chr16:39021283-39021068 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 243-435 |
| Cow position: | chr16:56975589-56975780 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 244-383 |
| Cow position: | chr16:122533-122671 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 244-383 |
| Cow position: | chr16:10629699-10629562 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 244-497 |
| Cow position: | chr16:4614633-4614382 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 245-409 |
| Cow position: | chr16:27174234-27174401 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 253-479 |
| Cow position: | chr16:45132856-45133084 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 151, 192 |
| Conread position: | 253-479 |
| Cow position: | chr16:52775425-52775649 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 259-504 |
| Cow position: | chr16:56202776-56202537 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 106, 159 |
| Conread position: | 267-504 |
| Cow position: | chr16:31133385-31133148 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-448 |
| Cow position: | chr16:23846539-23846708 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 271-470 |
| Cow position: | chr16:35280834-35280636 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 181, 117 |
| Conread position: | 275-492 |
| Cow position: | chr16:53617417-53617632 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 98, 133 |
| Conread position: | 284-504 |
| Cow position: | chr16:228854-228634 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 200 |
| Conread position: | 330-490 |
| Cow position: | chr16:11171648-11171489 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 333-499 |
| Cow position: | chr16:12274854-12274689 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.