Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 51-322 |
| Cow position: | chr18:47844625-47844900 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 193 |
| Conread position: | 57-326 |
| Cow position: | chr18:39098013-39097745 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 177 |
| Conread position: | 57-347 |
| Cow position: | chr18:27828065-27827774 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 130, 183 |
| Conread position: | 58-402 |
| Cow position: | chr18:10486627-10486290 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 63-469 |
| Cow position: | chr18:4472132-4471736 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 284 |
| Conread position: | 64-377 |
| Cow position: | chr18:16072028-16071711 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 65-386 |
| Cow position: | chr18:45655151-45654826 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 66-291 |
| Cow position: | chr18:11406690-11406450 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 189 |
| Conread position: | 70-458 |
| Cow position: | chr18:55145720-55146112 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 173 |
| Conread position: | 70-479 |
| Cow position: | chr18:52708894-52708493 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 107 |
| Conread position: | 71-311 |
| Cow position: | chr18:52249309-52249068 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 116, 94 |
| Conread position: | 71-402 |
| Cow position: | chr18:24796530-24796196 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 173 |
| Conread position: | 71-467 |
| Cow position: | chr18:2697803-2697411 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 46, 172 |
| Conread position: | 71-482 |
| Cow position: | chr18:4494671-4495080 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 71-497 |
| Cow position: | chr18:49646471-49646900 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 179 |
| Conread position: | 72-212 |
| Cow position: | chr18:21617551-21617693 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 72-416 |
| Cow position: | chr18:38308547-38308889 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 72-438 |
| Cow position: | chr18:14140246-14139893 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 72-447 |
| Cow position: | chr18:17234456-17234076 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 208 |
| Conread position: | 72-455 |
| Cow position: | chr18:52392976-52393366 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 72-479 |
| Cow position: | chr18:16558975-16559376 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 174 |
| Conread position: | 72-497 |
| Cow position: | chr18:32401651-32401245 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 73-273 |
| Cow position: | chr18:30978698-30978904 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 173 |
| Conread position: | 73-434 |
| Cow position: | chr18:8691360-8691728 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 73-435 |
| Cow position: | chr18:8340619-8340979 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 73-453 |
| Cow position: | chr18:2116776-2117161 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 75-395 |
| Cow position: | chr18:17220636-17220973 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 182 |
| Conread position: | 75-395 |
| Cow position: | chr18:17235284-17235621 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 182 |
| Conread position: | 77-442 |
| Cow position: | chr18:51389053-51389404 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 89-492 |
| Cow position: | chr18:43243884-43243472 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 131-384 |
| Cow position: | chr18:22418997-22418731 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 151-487 |
| Cow position: | chr18:42735345-42735013 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 88 |
| Conread position: | 243-478 |
| Cow position: | chr18:31954853-31955083 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 220, 67 |
| Conread position: | 243-504 |
| Cow position: | chr18:44215269-44215008 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 253-505 |
| Cow position: | chr18:25088970-25088738 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 56 |
| Conread position: | 257-505 |
| Cow position: | chr18:1707763-1707999 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 271-414 |
| Cow position: | chr18:30979048-30979193 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 335-504 |
| Cow position: | chr18:39097402-39097234 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 363-504 |
| Cow position: | chr18:21618080-21618218 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 59 |
Show alignments to all cow chromosomes.