Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               47-394
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 8
               

               Conread position:
               49-207
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               53-361
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 27
               

               Conread position:
               54-434
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               54-446
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 82
               

               Conread position:
               58-507
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               64-289
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               64-496
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               65-479
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 104
               

               Conread position:
               67-310
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 170
               

               Conread position:
               67-312
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               67-420
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 220
               

               Conread position:
               67-441
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 14
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 13
               

               Conread position:
               70-206
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               70-386
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               70-420
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               70-443
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               71-231
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               71-249
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               71-295
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               71-302
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               71-384
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               71-389
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               71-404
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 167
               

               Conread position:
               71-438
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 174
               

               Conread position:
               71-438
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 160
               

               Conread position:
               71-469
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 157
               

               Conread position:
               71-479
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               71-482
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 71
               

               Conread position:
               71-497
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 80
               

               Conread position:
               71-504
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 162
               

               Conread position:
               71-507
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 316
               

               Conread position:
               71-508
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 53
               

               Conread position:
               72-326
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               72-475
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               72-479
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               72-498
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               73-395
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               8, 172
               

               Conread position:
               73-402
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               73-432
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               73-497
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               74-306
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               75-280
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               195, 84
               

               Conread position:
               75-477
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               75-504
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 414
               

               Conread position:
               76-500
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 165
               

               Conread position:
               85-479
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 158
               

               Conread position:
               88-479
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               90-415
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               90-521
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 149
               

               Conread position:
               98-420
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               101-301
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               86, 143
               

               Conread position:
               208-455
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               215-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               243-394
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               243-497
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               257-448
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 187
               

               Conread position:
               265-534
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               281-492
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 127
               

               Conread position:
               298-442
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               298-481
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               308-497
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 120
               

               Conread position:
               319-519
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.