Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 47-394 |
| Cow position: | chr2:45690000-45690344 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 49-207 |
| Cow position: | chr2:77715774-77715613 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 53-361 |
| Cow position: | chr2:74439571-74439268 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 54-434 |
| Cow position: | chr2:15339305-15339683 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 54-446 |
| Cow position: | chr2:48071300-48070899 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 82 |
| Conread position: | 58-507 |
| Cow position: | chr2:70279020-70279454 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 42 |
| Conread position: | 64-289 |
| Cow position: | chr2:42264450-42264675 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 64-496 |
| Cow position: | chr2:59164047-59163617 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 65-479 |
| Cow position: | chr2:64174841-64175245 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 67-310 |
| Cow position: | chr2:43664358-43664115 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 170 |
| Conread position: | 67-312 |
| Cow position: | chr2:73168968-73168733 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 67-420 |
| Cow position: | chr2:33512621-33512253 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 220 |
| Conread position: | 67-441 |
| Cow position: | chr2:69924446-69924076 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 44 |
| Conread position: | 69-342 |
| Cow position: | chr2:40449748-40449474 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 69-466 |
| Cow position: | chr2:70178084-70177713 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 69-487 |
| Cow position: | chr2:377066-376646 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 70-206 |
| Cow position: | chr2:52865387-52865250 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 70-386 |
| Cow position: | chr2:9509391-9509068 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 70-420 |
| Cow position: | chr2:5327599-5327949 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 70-443 |
| Cow position: | chr2:21755034-21755398 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 71-231 |
| Cow position: | chr2:10161369-10161209 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 39 |
| Conread position: | 71-249 |
| Cow position: | chr2:76616736-76616915 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 71-295 |
| Cow position: | chr2:23646192-23646418 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 171 |
| Conread position: | 71-302 |
| Cow position: | chr2:18448212-18448448 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 147 |
| Conread position: | 71-384 |
| Cow position: | chr2:38809568-38809251 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 71-389 |
| Cow position: | chr2:36660252-36659941 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 71-404 |
| Cow position: | chr2:46490051-46490389 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 170 |
| Conread position: | 71-435 |
| Cow position: | chr2:3713972-3713607 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 71-438 |
| Cow position: | chr2:29450355-29450727 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 174 |
| Conread position: | 71-438 |
| Cow position: | chr2:71462003-71461634 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 160 |
| Conread position: | 71-469 |
| Cow position: | chr2:42191109-42190712 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 71-479 |
| Cow position: | chr2:27776652-27777061 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 71-482 |
| Cow position: | chr2:46258607-46258195 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 71 |
| Conread position: | 71-497 |
| Cow position: | chr2:73750730-73751160 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 80 |
| Conread position: | 71-504 |
| Cow position: | chr2:45113507-45113939 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 71-507 |
| Cow position: | chr2:46277183-46277658 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 316 |
| Conread position: | 71-508 |
| Cow position: | chr2:2400313-2400749 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 72-326 |
| Cow position: | chr2:71465901-71465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 72-475 |
| Cow position: | chr2:39549047-39548642 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 72-479 |
| Cow position: | chr2:57996126-57995724 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 72-498 |
| Cow position: | chr2:55407034-55407448 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 73-395 |
| Cow position: | chr2:1683340-1683012 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 8, 172 |
| Conread position: | 73-402 |
| Cow position: | chr2:528399-528727 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 73-432 |
| Cow position: | chr2:36951252-36950902 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 73-497 |
| Cow position: | chr2:74307919-74308323 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 74-306 |
| Cow position: | chr2:64784563-64784329 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 168 |
| Conread position: | 75-280 |
| Cow position: | chr2:67381259-67381461 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 195, 84 |
| Conread position: | 75-477 |
| Cow position: | chr2:74482004-74482410 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 92 |
| Conread position: | 75-504 |
| Cow position: | chr2:74811493-74811042 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 414 |
| Conread position: | 76-500 |
| Cow position: | chr2:19150483-19150061 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 165 |
| Conread position: | 85-479 |
| Cow position: | chr2:856434-856823 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 88-479 |
| Cow position: | chr2:69641153-69640771 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 90-415 |
| Cow position: | chr2:33219403-33219078 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 90-521 |
| Cow position: | chr2:19063789-19063360 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 149 |
| Conread position: | 98-420 |
| Cow position: | chr2:13332030-13332355 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 101-301 |
| Cow position: | chr2:60311009-60310805 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 86, 143 |
| Conread position: | 208-455 |
| Cow position: | chr2:74694644-74694890 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 215-504 |
| Cow position: | chr2:77715399-77715118 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 243-394 |
| Cow position: | chr2:66339626-66339781 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 243-497 |
| Cow position: | chr2:12854802-12855054 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 257-448 |
| Cow position: | chr2:46448270-46448077 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 187 |
| Conread position: | 265-534 |
| Cow position: | chr2:67381676-67381954 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 281-492 |
| Cow position: | chr2:18448693-18448903 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 298-442 |
| Cow position: | chr2:23648223-23648367 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 298-481 |
| Cow position: | chr2:46307664-46307846 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 308-497 |
| Cow position: | chr2:19575607-19575416 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 319-519 |
| Cow position: | chr2:64783701-64783501 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.