Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               50-269
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               55-314
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               55-422
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 23
               

               Conread position:
               58-443
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               64-489
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               67-448
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 177
               

               Conread position:
               69-221
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 87
               

               Conread position:
               69-469
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 96
               

               Conread position:
               70-293
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               99, 173
               

               Conread position:
               70-456
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               70-478
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               71-272
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               71-391
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 172
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               98, 170
               

               Conread position:
               71-479
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 172
               

               Conread position:
               71-479
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               71-504
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               72-434
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               72-436
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               150, 85
               

               Conread position:
               72-443
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 172
               

               Conread position:
               72-455
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               72-455
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               72-485
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               72-510
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               73-316
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 175
               

               Conread position:
               73-391
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               10, 176
               

               Conread position:
               73-438
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 172
               

               Conread position:
               73-445
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               73-461
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               119, 170
               

               Conread position:
               73-478
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 173
               

               Conread position:
               74-420
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 174
               

               Conread position:
               74-456
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               40, 114
               

               Conread position:
               75-313
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               8, 168
               

               Conread position:
               75-473
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 175
               

               Conread position:
               82-479
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               95-448
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               104-448
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               70, 139
               

               Conread position:
               115-495
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 127
               

               Conread position:
               128-461
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               146-418
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               161-456
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               210-466
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               247, 25
               

               Conread position:
               218-504
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               221-488
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               237, 14
               

               Conread position:
               243-448
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               244-503
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               217, 9
               

               Conread position:
               252-479
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               308-448
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 0
               
Show alignments to all cow chromosomes.