Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 49-435 |
| Cow position: | chr23:3202456-3202067 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 195 |
| Conread position: | 55-503 |
| Cow position: | chr23:665184-664715 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 65-390 |
| Cow position: | chr23:1676535-1676219 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 66-490 |
| Cow position: | chr23:22331135-22331550 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 67-390 |
| Cow position: | chr23:14744968-14744646 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 67-454 |
| Cow position: | chr23:19841254-19840868 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 69-443 |
| Cow position: | chr23:12980196-12980539 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 237, 34 |
| Conread position: | 69-500 |
| Cow position: | chr23:28882621-28882202 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 71-263 |
| Cow position: | chr23:36439703-36439895 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 169 |
| Conread position: | 71-384 |
| Cow position: | chr23:18394003-18394316 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 71-400 |
| Cow position: | chr23:27918729-27918394 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 71-409 |
| Cow position: | chr23:27615-27955 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 174 |
| Conread position: | 71-456 |
| Cow position: | chr23:596924-596540 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 71-462 |
| Cow position: | chr23:35164441-35164827 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 71-477 |
| Cow position: | chr23:18568196-18568609 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 82 |
| Conread position: | 72-316 |
| Cow position: | chr23:4882656-4882896 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 72-448 |
| Cow position: | chr23:31756845-31756465 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 72-455 |
| Cow position: | chr23:6303964-6303585 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 73-402 |
| Cow position: | chr23:1606866-1606536 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 74-418 |
| Cow position: | chr23:18244093-18243745 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 165 |
| Conread position: | 74-461 |
| Cow position: | chr23:12972193-12972576 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 167 |
| Conread position: | 74-479 |
| Cow position: | chr23:18986803-18987214 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 222 |
| Conread position: | 75-520 |
| Cow position: | chr23:13307752-13307324 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 86-475 |
| Cow position: | chr23:5220104-5219715 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 156 |
| Conread position: | 92-361 |
| Cow position: | chr23:595649-595379 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 150 |
| Conread position: | 106-293 |
| Cow position: | chr23:31086399-31086209 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 143-497 |
| Cow position: | chr23:22305467-22305110 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 163-446 |
| Cow position: | chr23:1280684-1280394 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 187-438 |
| Cow position: | chr23:4771026-4771281 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 187-479 |
| Cow position: | chr23:26343194-26343479 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 206-501 |
| Cow position: | chr23:36437497-36437213 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 215-415 |
| Cow position: | chr23:26591091-26590893 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 243-486 |
| Cow position: | chr23:33993551-33993791 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 22 |
| Conread position: | 244-479 |
| Cow position: | chr23:30589053-30589287 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 244-501 |
| Cow position: | chr23:22294301-22294562 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 256-456 |
| Cow position: | chr23:3536132-3536332 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 261-418 |
| Cow position: | chr23:20286023-20286178 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 288-449 |
| Cow position: | chr23:20108082-20108243 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 305-489 |
| Cow position: | chr23:36439913-36440094 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 319-451 |
| Cow position: | chr23:31086207-31086076 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
Show alignments to all cow chromosomes.