Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 40-461 |
| Cow position: | chr27:23089972-23089548 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 55-239 |
| Cow position: | chr27:4497301-4497111 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 114, 27 |
| Conread position: | 63-280 |
| Cow position: | chr27:23086955-23087171 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 63-361 |
| Cow position: | chr27:55982-56283 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 180 |
| Conread position: | 63-456 |
| Cow position: | chr27:20254927-20255299 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 63-504 |
| Cow position: | chr27:20009996-20009565 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 16 |
| Conread position: | 67-273 |
| Cow position: | chr27:16591388-16591179 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 58, 176 |
| Conread position: | 67-479 |
| Cow position: | chr27:7618387-7618796 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 69-415 |
| Cow position: | chr27:8664713-8664372 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 70-322 |
| Cow position: | chr27:13236202-13235947 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 70-388 |
| Cow position: | chr27:29700314-29699994 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 71-297 |
| Cow position: | chr27:17783625-17783381 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 130, 187 |
| Conread position: | 71-386 |
| Cow position: | chr27:31545338-31545659 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 71-420 |
| Cow position: | chr27:15512048-15511697 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 71-461 |
| Cow position: | chr27:26072299-26071915 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 173 |
| Conread position: | 71-479 |
| Cow position: | chr27:5486627-5486220 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 179 |
| Conread position: | 73-256 |
| Cow position: | chr27:30991964-30992151 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 73-386 |
| Cow position: | chr27:18731175-18731486 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 73-421 |
| Cow position: | chr27:5096226-5095883 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 73-435 |
| Cow position: | chr27:23914084-23914449 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 162 |
| Conread position: | 74-504 |
| Cow position: | chr27:28158048-28157607 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 53 |
| Conread position: | 75-464 |
| Cow position: | chr27:18673638-18673254 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 81-497 |
| Cow position: | chr27:18024940-18025340 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 153 |
| Conread position: | 96-237 |
| Cow position: | chr27:23995984-23996126 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 134-387 |
| Cow position: | chr27:28546404-28546658 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 179-341 |
| Cow position: | chr27:21158900-21159062 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 206-497 |
| Cow position: | chr27:29665511-29665212 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 215-420 |
| Cow position: | chr27:7139856-7139654 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 219-420 |
| Cow position: | chr27:7148270-7148073 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 243-424 |
| Cow position: | chr27:30992447-30992623 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 243-448 |
| Cow position: | chr27:22218530-22218733 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 243-504 |
| Cow position: | chr27:23996378-23996637 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 253-479 |
| Cow position: | chr27:4496822-4496596 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 212, 153 |
| Conread position: | 257-402 |
| Cow position: | chr27:16587569-16587713 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 276-451 |
| Cow position: | chr27:23087463-23087638 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-487 |
| Cow position: | chr27:3978318-3978108 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 145 |
| Conread position: | 305-504 |
| Cow position: | chr27:17826514-17826711 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.