Cow genome map
Conread name: | Lng1-LNG010075F05 |
Conread position: | 41-371 |
Cow position: | chr29:43005117-43004783 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 203 |
Conread position: | 44-507 |
Cow position: | chr29:1586145-1586598 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 8 |
Conread position: | 56-469 |
Cow position: | chr29:1447352-1446940 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 27 |
Conread position: | 57-283 |
Cow position: | chr29:36004960-36004734 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 112, 8 |
Conread position: | 58-461 |
Cow position: | chr29:13500903-13500507 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 139 |
Conread position: | 58-476 |
Cow position: | chr29:10625704-10626123 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 184 |
Conread position: | 63-222 |
Cow position: | chr29:42905583-42905419 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 68-495 |
Cow position: | chr29:38262782-38263208 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 69-491 |
Cow position: | chr29:18445146-18444734 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 88 |
Conread position: | 70-479 |
Cow position: | chr29:24139982-24140380 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 179 |
Conread position: | 70-481 |
Cow position: | chr29:25388988-25388591 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 18 |
Conread position: | 71-271 |
Cow position: | chr29:22689811-22690015 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 39, 78 |
Conread position: | 71-361 |
Cow position: | chr29:7353682-7353392 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 213 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 49, 178 |
Conread position: | 71-448 |
Cow position: | chr29:20049490-20049872 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 176 |
Conread position: | 71-476 |
Cow position: | chr29:23133733-23134123 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 88 |
Conread position: | 71-479 |
Cow position: | chr29:11361143-11360734 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 170 |
Conread position: | 71-479 |
Cow position: | chr29:29128477-29128888 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 143 |
Conread position: | 72-214 |
Cow position: | chr29:39419855-39420000 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 114, 35 |
Conread position: | 72-271 |
Cow position: | chr29:7621966-7621763 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 49, 170 |
Conread position: | 72-310 |
Cow position: | chr29:39295890-39296126 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 189 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 49, 171 |
Conread position: | 72-338 |
Cow position: | chr29:5230905-5230652 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 195 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 63, 163 |
Conread position: | 72-435 |
Cow position: | chr29:29456051-29455686 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 83 |
Conread position: | 72-484 |
Cow position: | chr29:40567290-40566875 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 86 |
Conread position: | 73-272 |
Cow position: | chr29:42909990-42909784 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 8, 174 |
Conread position: | 73-281 |
Cow position: | chr29:15521162-15521378 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 48, 175 |
Conread position: | 73-364 |
Cow position: | chr29:31177592-31177299 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 74 |
Conread position: | 73-435 |
Cow position: | chr29:8849318-8849683 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 170 |
Conread position: | 73-500 |
Cow position: | chr29:39532174-39532599 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 170 |
Conread position: | 73-503 |
Cow position: | chr29:40874334-40874738 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 67 |
Conread position: | 74-321 |
Cow position: | chr29:30539329-30539589 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 181 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 86 |
Conread position: | 75-236 |
Cow position: | chr29:42816256-42816418 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 63, 86 |
Conread position: | 75-479 |
Cow position: | chr29:40633018-40632618 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 168 |
Conread position: | 76-438 |
Cow position: | chr29:1900837-1900481 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 252 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 39, 144 |
Conread position: | 82-503 |
Cow position: | chr29:27058092-27058508 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 73 |
Conread position: | 83-231 |
Cow position: | chr29:5778174-5778021 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 89-231 |
Cow position: | chr29:32095967-32095828 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 46, 73 |
Conread position: | 91-386 |
Cow position: | chr29:6744131-6743834 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 35 |
Conread position: | 115-461 |
Cow position: | chr29:24801957-24801621 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 61, 77 |
Conread position: | 115-487 |
Cow position: | chr29:43152952-43153324 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 126 |
Conread position: | 121-442 |
Cow position: | chr29:30721835-30722162 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 66, 282 |
Conread position: | 155-487 |
Cow position: | chr29:1761692-1762025 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 236 |
Conread position: | 187-438 |
Cow position: | chr29:24506674-24506930 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 23, 53 |
Conread position: | 243-382 |
Cow position: | chr29:275184-275045 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 243-415 |
Cow position: | chr29:16431512-16431340 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 134 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 67, 152 |
Conread position: | 255-479 |
Cow position: | chr29:21306821-21306599 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 153 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 25, 9 |
Conread position: | 260-440 |
Cow position: | chr29:22690444-22690628 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 11, 61 |
Conread position: | 261-435 |
Cow position: | chr29:11973110-11973284 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 135, 146 |
Show alignments to all cow chromosomes.