Cow genome map

Conread name: Lng1-LNG010075F05

Conread position: 49-420
Cow position: chr3:9770202-9770551 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 156, 31

Conread position: 51-361
Cow position: chr3:65534771-65535077 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 54-443
Cow position: chr3:1902004-1902401 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 24

Conread position: 57-221
Cow position: chr3:71704134-71703971 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 23

Conread position: 57-448
Cow position: chr3:79067037-79067427 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 58

Conread position: 59-487
Cow position: chr3:63152002-63151561 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 21

Conread position: 63-377
Cow position: chr3:23630706-23630394 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 180

Conread position: 65-451
Cow position: chr3:8147101-8146713 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 175

Conread position: 66-416
Cow position: chr3:75055992-75055653 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 67-454
Cow position: chr3:81222114-81222506 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 170

Conread position: 68-303
Cow position: chr3:20059228-20059467 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 176

Conread position: 69-302
Cow position: chr3:23187124-23187372 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 185

Conread position: 69-435
Cow position: chr3:14039060-14038697 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 106

Conread position: 70-286
Cow position: chr3:8464148-8464356 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 113, 65

Conread position: 70-286
Cow position: chr3:83981119-83980901 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 117, 164

Conread position: 70-308
Cow position: chr3:6559443-6559197 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 178

Conread position: 70-357
Cow position: chr3:58190090-58189810 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 56

Conread position: 70-410
Cow position: chr3:6591375-6591725 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 70-455
Cow position: chr3:16574398-16574787 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 174

Conread position: 71-221
Cow position: chr3:48971479-48971332 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 30

Conread position: 71-304
Cow position: chr3:67829134-67828902 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 70

Conread position: 71-306
Cow position: chr3:20061923-20062158 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 163

Conread position: 71-384
Cow position: chr3:52852281-52851962 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 71-441
Cow position: chr3:31110142-31110515 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 173

Conread position: 71-467
Cow position: chr3:32579068-32578673 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 177

Conread position: 71-496
Cow position: chr3:63998002-63998432 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 181

Conread position: 72-202
Cow position: chr3:665049-665179 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 72-223
Cow position: chr3:53910501-53910655 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 95

Conread position: 72-236
Cow position: chr3:6770268-6770095 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 75

Conread position: 72-391
Cow position: chr3:4333269-4332941 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 180

Conread position: 72-438
Cow position: chr3:14184599-14184230 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 172

Conread position: 72-439
Cow position: chr3:44095147-44095508 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 164

Conread position: 72-448
Cow position: chr3:72884638-72885020 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 172

Conread position: 72-462
Cow position: chr3:25695359-25695749 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 47

Conread position: 72-465
Cow position: chr3:9233555-9233178 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 171

Conread position: 72-492
Cow position: chr3:32246656-32246237 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 160

Conread position: 73-276
Cow position: chr3:8708862-8708658 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 112

Conread position: 73-361
Cow position: chr3:2307974-2308263 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 170

Conread position: 73-467
Cow position: chr3:23178373-23178770 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 170

Conread position: 73-479
Cow position: chr3:79071256-79070869 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 93

Conread position: 74-316
Cow position: chr3:48244274-48244036 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 170

Conread position: 78-380
Cow position: chr3:45948636-45948933 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 70

Conread position: 87-273
Cow position: chr3:53211014-53211203 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 156

Conread position: 89-303
Cow position: chr3:4446420-4446204 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 138

Conread position: 89-386
Cow position: chr3:60787864-60788160 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 39

Conread position: 91-504
Cow position: chr3:11952346-11951927 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 153

Conread position: 95-448
Cow position: chr3:78095999-78096342 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 52

Conread position: 128-454
Cow position: chr3:44090758-44090443 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 60

Conread position: 133-511
Cow position: chr3:17615608-17615968 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 134-322
Cow position: chr3:81080843-81080654 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 53, 106

Conread position: 161-501
Cow position: chr3:83458862-83459203 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 164-386
Cow position: chr3:21839866-21840083 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 73

Conread position: 186-497
Cow position: chr3:8435604-8435287 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 91

Conread position: 214-504
Cow position: chr3:53910824-53911111 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 158

Conread position: 216-461
Cow position: chr3:665216-665465 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 23

Conread position: 243-357
Cow position: chr3:3709634-3709520 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 243-435
Cow position: chr3:6769940-6769750 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 145, 153

Conread position: 243-474
Cow position: chr3:69279951-69279719 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 82

Conread position: 252-435
Cow position: chr3:53210683-53210502 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 17

Conread position: 255-458
Cow position: chr3:28595681-28595486 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 170, 6

Conread position: 256-386
Cow position: chr3:67537652-67537522 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-435
Cow position: chr3:6559182-6559039 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 290-504
Cow position: chr3:83980686-83980477 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 90

Conread position: 319-486
Cow position: chr3:6736303-6736468 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 104

Show alignments to all cow chromosomes.