Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               49-420
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               51-361
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               54-443
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               57-221
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 23
               

               Conread position:
               57-448
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               59-487
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               63-377
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               72, 180
               

               Conread position:
               65-451
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 175
               

               Conread position:
               66-416
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               67-454
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 170
               

               Conread position:
               68-303
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 176
               

               Conread position:
               69-302
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               81, 185
               

               Conread position:
               69-435
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 106
               

               Conread position:
               70-286
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               70-286
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               117, 164
               

               Conread position:
               70-308
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 178
               

               Conread position:
               70-357
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               70-410
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               70-455
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 174
               

               Conread position:
               71-221
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               71-304
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               71-306
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 163
               

               Conread position:
               71-384
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               71-441
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 173
               

               Conread position:
               71-467
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 177
               

               Conread position:
               71-496
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 181
               

               Conread position:
               72-202
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-223
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 95
               

               Conread position:
               72-236
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               72-391
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 180
               

               Conread position:
               72-438
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               72-439
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 164
               

               Conread position:
               72-448
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 172
               

               Conread position:
               72-462
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               72-465
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 171
               

               Conread position:
               72-492
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               73-276
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               73-361
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               47, 170
               

               Conread position:
               73-467
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 170
               

               Conread position:
               73-479
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               74-316
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               113, 170
               

               Conread position:
               78-380
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               87-273
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               89-303
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               98, 138
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               91-504
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 153
               

               Conread position:
               95-448
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               128-454
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               133-511
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 136
               

               Conread position:
               134-322
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               53, 106
               

               Conread position:
               161-501
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               164-386
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               186-497
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               214-504
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               216-461
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               243-357
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-435
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               145, 153
               

               Conread position:
               243-474
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               252-435
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               255-458
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               170, 6
               

               Conread position:
               256-386
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-435
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               290-504
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 90
               

               Conread position:
               319-486
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 104
               
Show alignments to all cow chromosomes.