Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 41-477 |
| Cow position: | chr4:42364570-42365007 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 47-497 |
| Cow position: | chr4:3902044-3901590 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 49-492 |
| Cow position: | chr4:53652095-53651667 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 52-456 |
| Cow position: | chr4:23613304-23612887 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 57-291 |
| Cow position: | chr4:26617805-26617567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 187 |
| Conread position: | 58-433 |
| Cow position: | chr4:43284079-43283700 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 65-435 |
| Cow position: | chr4:6888022-6887658 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 104, 177 |
| Conread position: | 67-394 |
| Cow position: | chr4:65654135-65653803 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 67-420 |
| Cow position: | chr4:37857127-37857486 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 67-442 |
| Cow position: | chr4:55647841-55648202 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 67-449 |
| Cow position: | chr4:5815203-5815583 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 50 |
| Conread position: | 67-490 |
| Cow position: | chr4:63548705-63549136 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 186 |
| Conread position: | 67-504 |
| Cow position: | chr4:30016642-30017082 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 68-385 |
| Cow position: | chr4:66854050-66853740 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 69-479 |
| Cow position: | chr4:18283411-18283822 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 177 |
| Conread position: | 70-225 |
| Cow position: | chr4:59577305-59577464 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 70-379 |
| Cow position: | chr4:32803934-32803627 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 158 |
| Conread position: | 70-435 |
| Cow position: | chr4:35070624-35070253 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 70-449 |
| Cow position: | chr4:37548379-37548762 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 70-452 |
| Cow position: | chr4:59566746-59566370 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 71-309 |
| Cow position: | chr4:37509568-37509806 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 71-351 |
| Cow position: | chr4:37343628-37343344 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 174 |
| Conread position: | 71-418 |
| Cow position: | chr4:54379380-54379031 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 53 |
| Conread position: | 71-457 |
| Cow position: | chr4:18797359-18797750 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 174 |
| Conread position: | 71-461 |
| Cow position: | chr4:45383307-45382916 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 194 |
| Conread position: | 71-472 |
| Cow position: | chr4:61680764-61681138 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 71-487 |
| Cow position: | chr4:32843733-32844143 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 72-236 |
| Cow position: | chr4:60833758-60833592 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 72-271 |
| Cow position: | chr4:165426-165628 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 72-409 |
| Cow position: | chr4:54377355-54377690 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 72-461 |
| Cow position: | chr4:44425769-44425374 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 72-479 |
| Cow position: | chr4:33002816-33002401 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 174 |
| Conread position: | 73-296 |
| Cow position: | chr4:43704163-43703945 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 152 |
| Conread position: | 73-367 |
| Cow position: | chr4:43643591-43643305 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 73-373 |
| Cow position: | chr4:32713647-32713354 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 73-435 |
| Cow position: | chr4:25189137-25188774 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 73-486 |
| Cow position: | chr4:59857850-59858260 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 154 |
| Conread position: | 75-500 |
| Cow position: | chr4:4125686-4126097 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 79-393 |
| Cow position: | chr4:587706-588021 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 88-455 |
| Cow position: | chr4:59265408-59265761 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 90-477 |
| Cow position: | chr4:38951446-38951854 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 94-393 |
| Cow position: | chr4:14422226-14422543 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 121-413 |
| Cow position: | chr4:68310859-68310573 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 125-438 |
| Cow position: | chr4:29119650-29119340 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 151-405 |
| Cow position: | chr4:1226370-1226623 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 208-451 |
| Cow position: | chr4:49765170-49764926 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 209-451 |
| Cow position: | chr4:23681101-23681335 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 218-485 |
| Cow position: | chr4:64963308-64963572 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 211, 17 |
| Conread position: | 243-504 |
| Cow position: | chr4:59577701-59577963 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 254-414 |
| Cow position: | chr4:4032104-4031945 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 265-420 |
| Cow position: | chr4:58787229-58787385 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 288-487 |
| Cow position: | chr4:181696-181497 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 135, 140 |
Show alignments to all cow chromosomes.