Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 51-325 |
| Cow position: | chr8:19946963-19946700 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 55-361 |
| Cow position: | chr8:49363881-49364190 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 56-487 |
| Cow position: | chr8:60000663-60001093 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 61-441 |
| Cow position: | chr8:25386870-25386494 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 61-502 |
| Cow position: | chr8:49672766-49673214 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 158 |
| Conread position: | 63-486 |
| Cow position: | chr8:48454594-48455032 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 65-263 |
| Cow position: | chr8:45561886-45562091 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 182 |
| Conread position: | 65-461 |
| Cow position: | chr8:1649037-1649430 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 66-440 |
| Cow position: | chr8:60578050-60577673 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 67-504 |
| Cow position: | chr8:23352845-23352402 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 103 |
| Conread position: | 70-396 |
| Cow position: | chr8:31732269-31731930 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 178 |
| Conread position: | 71-221 |
| Cow position: | chr8:46795080-46794927 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 71-228 |
| Cow position: | chr8:62070059-62069898 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 71-380 |
| Cow position: | chr8:12084695-12084381 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 71-428 |
| Cow position: | chr8:39060005-39059657 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 66 |
| Conread position: | 72-271 |
| Cow position: | chr8:8969808-8969609 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 96 |
| Conread position: | 72-367 |
| Cow position: | chr8:19024609-19024913 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 72-409 |
| Cow position: | chr8:35559040-35558700 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 72-423 |
| Cow position: | chr8:57724227-57724566 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 72-438 |
| Cow position: | chr8:1443212-1442845 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 72-438 |
| Cow position: | chr8:1647698-1648056 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 73-265 |
| Cow position: | chr8:1679556-1679751 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 170 |
| Conread position: | 73-441 |
| Cow position: | chr8:48674393-48674023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 170 |
| Conread position: | 73-454 |
| Cow position: | chr8:1654060-1653677 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 74-393 |
| Cow position: | chr8:35479332-35479636 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 74-487 |
| Cow position: | chr8:7004020-7004429 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 74-487 |
| Cow position: | chr8:22039687-22040094 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 75-356 |
| Cow position: | chr8:24959668-24959384 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 77-311 |
| Cow position: | chr8:17928412-17928646 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 82-357 |
| Cow position: | chr8:59224264-59224537 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 84-443 |
| Cow position: | chr8:40114664-40114314 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 94-316 |
| Cow position: | chr8:2957901-2957675 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 118-376 |
| Cow position: | chr8:5671066-5671328 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 181-434 |
| Cow position: | chr8:25797790-25797530 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 215-434 |
| Cow position: | chr8:34835941-34835726 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 243-479 |
| Cow position: | chr8:33160938-33160701 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 243-501 |
| Cow position: | chr8:5246915-5246666 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 92, 83 |
| Conread position: | 249-504 |
| Cow position: | chr8:46794611-46794353 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 261-515 |
| Cow position: | chr8:8969121-8968879 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 289-503 |
| Cow position: | chr8:21767671-21767460 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 291-497 |
| Cow position: | chr8:6871423-6871622 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 94 |
Show alignments to all cow chromosomes.