Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 42-361 |
| Cow position: | chr9:34315382-34315056 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 53-476 |
| Cow position: | chr9:7094214-7093798 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 58-434 |
| Cow position: | chr9:32609054-32609428 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 63-417 |
| Cow position: | chr9:40477274-40476936 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 65-448 |
| Cow position: | chr9:25032397-25032776 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 67-204 |
| Cow position: | chr9:28596992-28597129 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 67-317 |
| Cow position: | chr9:11315926-11315672 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 177 |
| Conread position: | 67-439 |
| Cow position: | chr9:6164085-6163703 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 185 |
| Conread position: | 67-451 |
| Cow position: | chr9:20984286-20983897 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 70-438 |
| Cow position: | chr9:48610297-48610668 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 70-456 |
| Cow position: | chr9:44717995-44718383 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 70-467 |
| Cow position: | chr9:55033371-55032971 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 176 |
| Conread position: | 71-314 |
| Cow position: | chr9:63411085-63411335 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 48, 174 |
| Conread position: | 71-347 |
| Cow position: | chr9:45202217-45201946 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 72-381 |
| Cow position: | chr9:47438724-47439040 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 173 |
| Conread position: | 72-435 |
| Cow position: | chr9:44559804-44560173 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 176 |
| Conread position: | 72-446 |
| Cow position: | chr9:6655856-6656229 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 115 |
| Conread position: | 72-447 |
| Cow position: | chr9:31643877-31644268 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 186 |
| Conread position: | 72-453 |
| Cow position: | chr9:11418115-11418499 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 172 |
| Conread position: | 72-479 |
| Cow position: | chr9:9391136-9390731 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 72-487 |
| Cow position: | chr9:28249099-28248658 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 300 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 73-260 |
| Cow position: | chr9:6721346-6721536 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 114, 169 |
| Conread position: | 73-385 |
| Cow position: | chr9:26530387-26530069 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 167 |
| Conread position: | 73-389 |
| Cow position: | chr9:8203838-8204157 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 73-424 |
| Cow position: | chr9:102034-102374 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 73-451 |
| Cow position: | chr9:49582556-49582912 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 73-454 |
| Cow position: | chr9:6316912-6317302 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 177 |
| Conread position: | 73-484 |
| Cow position: | chr9:10896485-10896909 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 174 |
| Conread position: | 75-293 |
| Cow position: | chr9:62568451-62568665 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 75-394 |
| Cow position: | chr9:9561691-9562013 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 169 |
| Conread position: | 80-496 |
| Cow position: | chr9:28281962-28281537 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 325 |
| Conread position: | 84-431 |
| Cow position: | chr9:10894669-10894333 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 84-504 |
| Cow position: | chr9:13453377-13453794 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 95-356 |
| Cow position: | chr9:12861118-12861378 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 74, 148 |
| Conread position: | 101-479 |
| Cow position: | chr9:58469923-58469551 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 135-497 |
| Cow position: | chr9:62925595-62925232 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 105 |
| Conread position: | 143-387 |
| Cow position: | chr9:3873418-3873663 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 243-459 |
| Cow position: | chr9:36420835-36420625 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 145, 153 |
| Conread position: | 244-403 |
| Cow position: | chr9:44559660-44559507 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 253-485 |
| Cow position: | chr9:28599190-28599419 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 262-507 |
| Cow position: | chr9:6721600-6721837 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.