Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 6-521 |
| Cow position: | chrX:31908696-31909212 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 9 |
| Conread position: | 50-420 |
| Cow position: | chrX:21177584-21177946 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 51-487 |
| Cow position: | chrX:13817055-13816626 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 5 |
| Conread position: | 55-461 |
| Cow position: | chrX:25441720-25442120 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 56-461 |
| Cow position: | chrX:25435226-25434814 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 57-414 |
| Cow position: | chrX:31918942-31919299 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 174 |
| Conread position: | 58-435 |
| Cow position: | chrX:23364095-23364477 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 65-479 |
| Cow position: | chrX:11840551-11840961 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 179 |
| Conread position: | 67-303 |
| Cow position: | chrX:17482603-17482844 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 121, 174 |
| Conread position: | 67-455 |
| Cow position: | chrX:44191552-44191947 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 67-497 |
| Cow position: | chrX:38740115-38739683 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 68-200 |
| Cow position: | chrX:6815993-6815860 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 69-481 |
| Cow position: | chrX:42549926-42549523 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 177 |
| Conread position: | 71-314 |
| Cow position: | chrX:39427307-39427554 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 48, 174 |
| Conread position: | 71-392 |
| Cow position: | chrX:803069-802752 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 174 |
| Conread position: | 71-433 |
| Cow position: | chrX:47121204-47121569 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 173 |
| Conread position: | 71-476 |
| Cow position: | chrX:26352084-26352515 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 71-479 |
| Cow position: | chrX:42066610-42066201 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 71-479 |
| Cow position: | chrX:42558530-42558126 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 71-492 |
| Cow position: | chrX:11810012-11810438 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 175 |
| Conread position: | 71-504 |
| Cow position: | chrX:24631163-24630730 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 157 |
| Conread position: | 72-504 |
| Cow position: | chrX:39097021-39097441 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 151 |
| Conread position: | 73-363 |
| Cow position: | chrX:112588-112295 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 73-400 |
| Cow position: | chrX:38138915-38139239 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 73-435 |
| Cow position: | chrX:29901511-29901147 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 73-467 |
| Cow position: | chrX:25219315-25218925 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 73-504 |
| Cow position: | chrX:1340316-1340749 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 75-464 |
| Cow position: | chrX:41930198-41929808 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 77-478 |
| Cow position: | chrX:42915875-42915488 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 162 |
| Conread position: | 82-447 |
| Cow position: | chrX:3040083-3040461 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 125 |
| Conread position: | 89-435 |
| Cow position: | chrX:29774800-29774455 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 101-384 |
| Cow position: | chrX:219976-219692 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 126-504 |
| Cow position: | chrX:31444021-31443656 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 116 |
| Conread position: | 134-316 |
| Cow position: | chrX:48057961-48058145 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 154-487 |
| Cow position: | chrX:25236817-25237143 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 214-438 |
| Cow position: | chrX:31465956-31466175 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 215-487 |
| Cow position: | chrX:21242873-21243148 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 8 |
| Conread position: | 245-419 |
| Cow position: | chrX:4547400-4547575 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 164 |
| Conread position: | 265-508 |
| Cow position: | chrX:15370054-15370317 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 291-451 |
| Cow position: | chrX:38737319-38737477 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 300-504 |
| Cow position: | chrX:18507512-18507715 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 103, 124 |
| Conread position: | 304-513 |
| Cow position: | chrX:25227484-25227277 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 123 |
| Conread position: | 310-448 |
| Cow position: | chrX:17482988-17483125 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.