Cow genome map

Conread name: Lng1-LNG010078A01

Conread position: 1-131
Cow position: chr3:25735709-25735839 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr3:42933675-42933547 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 2-134
Cow position: chr3:79877222-79877091 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 117, 12

Conread position: 3-129
Cow position: chr3:18479107-18479230 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-131
Cow position: chr3:43388934-43389061 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 4-131
Cow position: chr3:4071578-4071705 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-131
Cow position: chr3:21694418-21694291 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 71

Conread position: 4-131
Cow position: chr3:66563977-66563849 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 4-136
Cow position: chr3:9662978-9663110 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-136
Cow position: chr3:76056098-76056223 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 5-131
Cow position: chr3:21866848-21866971 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 5-131
Cow position: chr3:59997944-59997817 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 5-136
Cow position: chr3:60371174-60371045 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 5-142
Cow position: chr3:70632339-70632201 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 127

Conread position: 7-130
Cow position: chr3:2636745-2636869 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 9-131
Cow position: chr3:986201-986079 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr3:55730280-55730402 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-129
Cow position: chr3:635363-635246 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 10-129
Cow position: chr3:72342433-72342314 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr3:2675217-2675096 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 11-131
Cow position: chr3:44218952-44218832 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-142
Cow position: chr3:29944042-29943913 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 16-131
Cow position: chr3:61680496-61680381 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 17-129
Cow position: chr3:72626564-72626677 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 17-131
Cow position: chr3:12090855-12090739 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 20-131
Cow position: chr3:75974904-75975015 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-131
Cow position: chr3:76168454-76168565 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 20-132
Cow position: chr3:24468209-24468319 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 20-134
Cow position: chr3:70333794-70333908 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 20-136
Cow position: chr3:15443551-15443667 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-136
Cow position: chr3:61023846-61023961 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 20-136
Cow position: chr3:62186333-62186213 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 25-144
Cow position: chr3:210492-210374 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 216-507
Cow position: chr3:52610784-52611081 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 32

Show alignments to all cow chromosomes.