Cow genome map

Conread name: Lng1-LNG010078A01

Conread position: 1-130
Cow position: chrX:31489767-31489639 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-131
Cow position: chrX:35285421-35285291 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-137
Cow position: chrX:5134722-5134585 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 123

Conread position: 2-125
Cow position: chrX:4327934-4328060 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 2-129
Cow position: chrX:38080395-38080267 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 2-131
Cow position: chrX:597234-597361 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 2-131
Cow position: chrX:1938260-1938132 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 108

Conread position: 2-137
Cow position: chrX:17231981-17231848 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 3-132
Cow position: chrX:32590158-32590289 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 3-134
Cow position: chrX:19000372-19000242 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 4-129
Cow position: chrX:34193836-34193961 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-130
Cow position: chrX:35409996-35409870 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-134
Cow position: chrX:23335732-23335861 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 4-136
Cow position: chrX:44995745-44995612 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 5-136
Cow position: chrX:51660-51788 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 6-135
Cow position: chrX:18196242-18196112 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 7-129
Cow position: chrX:8642286-8642164 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-131
Cow position: chrX:19161890-19162013 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 6

Conread position: 10-126
Cow position: chrX:19018590-19018708 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 10-130
Cow position: chrX:1996213-1996333 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-143
Cow position: chrX:40531788-40531923 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 127

Conread position: 11-131
Cow position: chrX:17524146-17524266 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-143
Cow position: chrX:8759860-8759731 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 12-142
Cow position: chrX:28068087-28067958 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 16-126
Cow position: chrX:4399350-4399242 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 16-131
Cow position: chrX:6559222-6559339 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 16-131
Cow position: chrX:42159174-42159059 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-131
Cow position: chrX:12095540-12095654 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-134
Cow position: chrX:6856091-6855975 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 17-135
Cow position: chrX:16801036-16801152 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 17-137
Cow position: chrX:44040408-44040289 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 20-131
Cow position: chrX:40337139-40337028 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-131
Cow position: chrX:42449785-42449896 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-134
Cow position: chrX:42760481-42760367 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-137
Cow position: chrX:41215551-41215435 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 24-134
Cow position: chrX:10479974-10479864 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-136
Cow position: chrX:19356688-19356576 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 24-136
Cow position: chrX:42246957-42247069 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 24-142
Cow position: chrX:17498547-17498430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 170-494
Cow position: chrX:136534-136851 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 71

Show alignments to all cow chromosomes.