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Cow genome map

           
Conread name:
           
Lng1-LNG010084D02
        

               
Conread position:
               
273-601
               

               
Cow position:
               
chr12:48415318-48415634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
285, 49
               

               
Conread position:
               
274-529
               

               
Cow position:
               
chr12:39746613-39746355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
281-612
               

               
Cow position:
               
chr12:7884481-7884812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 177
               

               
Conread position:
               
286-606
               

               
Cow position:
               
chr12:14223171-14222852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
287-515
               

               
Cow position:
               
chr12:25823036-25823264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
287-584
               

               
Cow position:
               
chr12:9130093-9129794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
287-638
               

               
Cow position:
               
chr12:12301119-12300765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 179
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr12:18420729-18421110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
289-432
               

               
Cow position:
               
chr12:11168057-11167907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
289-481
               

               
Cow position:
               
chr12:8842108-8842301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
289-499
               

               
Cow position:
               
chr12:4182103-4182308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
289-529
               

               
Cow position:
               
chr12:27385675-27385439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
290-513
               

               
Cow position:
               
chr12:9464998-9465220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
290-598
               

               
Cow position:
               
chr12:26749764-26750075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
290-670
               

               
Cow position:
               
chr12:33851540-33851176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
291-665
               

               
Cow position:
               
chr12:42602049-42602415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 173
               

               
Conread position:
               
291-666
               

               
Cow position:
               
chr12:23446901-23446536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 71
               

               
Conread position:
               
291-670
               

               
Cow position:
               
chr12:27802874-27803229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
291-674
               

               
Cow position:
               
chr12:18123855-18123499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr12:29195480-29195270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr12:20208024-20207805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
292-536
               

               
Cow position:
               
chr12:40881737-40881968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
292-541
               

               
Cow position:
               
chr12:41802114-41801864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 166
               

               
Conread position:
               
292-541
               

               
Cow position:
               
chr12:45039294-45039045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
292-611
               

               
Cow position:
               
chr12:25193224-25192922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
292-628
               

               
Cow position:
               
chr12:34165783-34165441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
293-449
               

               
Cow position:
               
chr12:4093587-4093748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
293-486
               

               
Cow position:
               
chr12:42951511-42951696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
293-492
               

               
Cow position:
               
chr12:30042911-30042711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 165
               

               
Conread position:
               
293-495
               

               
Cow position:
               
chr12:31602641-31602839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr12:6958403-6958192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
293-509
               

               
Cow position:
               
chr12:45782407-45782195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 165
               

               
Conread position:
               
293-529
               

               
Cow position:
               
chr12:34028943-34029178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
293-584
               

               
Cow position:
               
chr12:25343967-25343680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 165
               

               
Conread position:
               
293-614
               

               
Cow position:
               
chr12:33298367-33298054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
293-628
               

               
Cow position:
               
chr12:26217642-26217972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
293-637
               

               
Cow position:
               
chr12:13988555-13988216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
293-670
               

               
Cow position:
               
chr12:12165835-12165475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr12:27663805-27663970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
294-517
               

               
Cow position:
               
chr12:24146814-24146592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
294-522
               

               
Cow position:
               
chr12:26357186-26357413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
294-613
               

               
Cow position:
               
chr12:24152524-24152206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
103, 168
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr12:12233061-12232878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
295-503
               

               
Cow position:
               
chr12:31237778-31237986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
295-503
               

               
Cow position:
               
chr12:35664142-35663938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
295-508
               

               
Cow position:
               
chr12:35137102-35136889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
295-513
               

               
Cow position:
               
chr12:20356630-20356841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr12:37480657-37480871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr12:39149869-39150089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
295-523
               

               
Cow position:
               
chr12:16309917-16310150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
295-551
               

               
Cow position:
               
chr12:42923930-42924189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
295-582
               

               
Cow position:
               
chr12:21922619-21922349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
295-584
               

               
Cow position:
               
chr12:4955004-4954728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
295-622
               

               
Cow position:
               
chr12:31530482-31530149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr12:9143560-9143210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr12:25561549-25561185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr12:36119147-36118787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
296-513
               

               
Cow position:
               
chr12:26356528-26356746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
296-516
               

               
Cow position:
               
chr12:9866581-9866802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 162
               

               
Conread position:
               
296-519
               

               
Cow position:
               
chr12:38343734-38343510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
296-545
               

               
Cow position:
               
chr12:22291311-22291551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
231, 18
               

               
Conread position:
               
296-545
               

               
Cow position:
               
chr12:37123832-37123585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
296-610
               

               
Cow position:
               
chr12:18563344-18563021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
296-621
               

               
Cow position:
               
chr12:10942476-10942146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 168
               

               
Conread position:
               
297-426
               

               
Cow position:
               
chr12:6278356-6278485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-453
               

               
Cow position:
               
chr12:14360823-14360662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
297-478
               

               
Cow position:
               
chr12:38031965-38032140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr12:12699458-12699656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 162
               

               
Conread position:
               
297-497
               

               
Cow position:
               
chr12:39735485-39735683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
297-511
               

               
Cow position:
               
chr12:23714851-23714642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
297-515
               

               
Cow position:
               
chr12:17928903-17929110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-519
               

               
Cow position:
               
chr12:41684683-41684470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr12:20404328-20404097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr12:33495414-33495182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
297-542
               

               
Cow position:
               
chr12:37696212-37696458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
297-544
               

               
Cow position:
               
chr12:13911399-13911646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
297-545
               

               
Cow position:
               
chr12:6206512-6206267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
297-545
               

               
Cow position:
               
chr12:11860879-11860634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
297-604
               

               
Cow position:
               
chr12:38126342-38126649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 161
               

               
Conread position:
               
297-606
               

               
Cow position:
               
chr12:12530897-12531198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
297-614
               

               
Cow position:
               
chr12:1333391-1333096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
297-623
               

               
Cow position:
               
chr12:38215846-38216181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
297-631
               

               
Cow position:
               
chr12:15784103-15783774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
297-659
               

               
Cow position:
               
chr12:6241998-6242348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
297-664
               

               
Cow position:
               
chr12:1998619-1998977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
297-664
               

               
Cow position:
               
chr12:4720122-4719768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-664
               

               
Cow position:
               
chr12:23917017-23916665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr12:15938091-15938457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr12:9482122-9482485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr12:42160377-42160736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
298-450
               

               
Cow position:
               
chr12:9055238-9055396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
298-450
               

               
Cow position:
               
chr12:39738117-39738276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr12:27176818-27176615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr12:27192186-27192389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
298-519
               

               
Cow position:
               
chr12:22323090-22323316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
298-529
               

               
Cow position:
               
chr12:36261876-36261638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
298-552
               

               
Cow position:
               
chr12:24095096-24094840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
298-579
               

               
Cow position:
               
chr12:37514103-37514380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
298-605
               

               
Cow position:
               
chr12:42286561-42286876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
298-607
               

               
Cow position:
               
chr12:16056677-16056985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
298-628
               

               
Cow position:
               
chr12:16670444-16670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr12:24032665-24032351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
298-667
               

               
Cow position:
               
chr12:15089694-15089334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
298-670
               

               
Cow position:
               
chr12:40910107-40910472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
298-673
               

               
Cow position:
               
chr12:25280325-25280679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr12:19508388-19508755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr12:34385351-34385701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
244, 49
               

               
Conread position:
               
299-448
               

               
Cow position:
               
chr12:26670243-26670088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
299-489
               

               
Cow position:
               
chr12:14396612-14396796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr12:41989500-41989712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
299-506
               

               
Cow position:
               
chr12:34878016-34877802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
299-545
               

               
Cow position:
               
chr12:6187932-6188179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 161
               

               
Conread position:
               
299-584
               

               
Cow position:
               
chr12:35240925-35241205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
299-672
               

               
Cow position:
               
chr12:30803803-30804161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
300-469
               

               
Cow position:
               
chr12:13995618-13995789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr12:35469275-35469492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
300-608
               

               
Cow position:
               
chr12:7902626-7902928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
300-668
               

               
Cow position:
               
chr12:31948289-31947937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr12:35368819-35368454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
301-467
               

               
Cow position:
               
chr12:4109223-4109049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr12:22048101-22047903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
301-500
               

               
Cow position:
               
chr12:45304062-45303874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr12:32374774-32374557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 160
               

               
Conread position:
               
301-553
               

               
Cow position:
               
chr12:29057565-29057314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
301-566
               

               
Cow position:
               
chr12:45001894-45002153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
301-599
               

               
Cow position:
               
chr12:31269333-31269033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
301-622
               

               
Cow position:
               
chr12:7110383-7110060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 163
               

               
Conread position:
               
301-664
               

               
Cow position:
               
chr12:42879869-42879518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
301-673
               

               
Cow position:
               
chr12:28131765-28131398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
302-593
               

               
Cow position:
               
chr12:18582824-18583104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
302-622
               

               
Cow position:
               
chr12:15103453-15103125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
302-643
               

               
Cow position:
               
chr12:34473433-34473785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 244
               

               
Conread position:
               
302-670
               

               
Cow position:
               
chr12:34465844-34466196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 83
               

               
Conread position:
               
302-672
               

               
Cow position:
               
chr12:46714551-46714184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr12:25027583-25027969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr12:42282663-42283021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
303-505
               

               
Cow position:
               
chr12:18561714-18561513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
5, 157
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr12:26146997-26147212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr12:15496072-15495833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
303-673
               

               
Cow position:
               
chr12:10895380-10895732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
303-674
               

               
Cow position:
               
chr12:22515563-22515923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
304-457
               

               
Cow position:
               
chr12:32808443-32808596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr12:3057262-3057065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 154
               

               
Conread position:
               
304-536
               

               
Cow position:
               
chr12:24181310-24181091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
304-671
               

               
Cow position:
               
chr12:17879132-17879486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
304-674
               

               
Cow position:
               
chr12:8759505-8759133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
305-439
               

               
Cow position:
               
chr12:6719561-6719421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr12:16628826-16628969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr12:25819530-25819678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
305-495
               

               
Cow position:
               
chr12:13096022-13095845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr12:28699606-28699805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
305-509
               

               
Cow position:
               
chr12:3039895-3039698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
305-513
               

               
Cow position:
               
chr12:34532901-34533109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
305-514
               

               
Cow position:
               
chr12:41776268-41776062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr12:26868643-26868855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
305-584
               

               
Cow position:
               
chr12:42286138-42285866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
305-665
               

               
Cow position:
               
chr12:24023640-24023974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
257, 87
               

               
Conread position:
               
305-668
               

               
Cow position:
               
chr12:8943047-8943400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
305-673
               

               
Cow position:
               
chr12:36500775-36501136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr12:13643404-13643049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr12:29899247-29899620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr12:39465736-39465395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
243, 89
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr12:42967166-42966813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
306-535
               

               
Cow position:
               
chr12:25814322-25814090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
306-545
               

               
Cow position:
               
chr12:10827956-10827717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 150
               

               
Conread position:
               
306-638
               

               
Cow position:
               
chr12:15050455-15050773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
306-638
               

               
Cow position:
               
chr12:22284952-22285275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
306-669
               

               
Cow position:
               
chr12:38774075-38774422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 147
               

               
Conread position:
               
307-514
               

               
Cow position:
               
chr12:9065728-9065519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
307-529
               

               
Cow position:
               
chr12:19261364-19261144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
307-674
               

               
Cow position:
               
chr12:17031780-17031428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
307-674
               

               
Cow position:
               
chr12:27563210-27563570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
308-511
               

               
Cow position:
               
chr12:29731479-29731281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
310-514
               

               
Cow position:
               
chr12:14988417-14988228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
312-450
               

               
Cow position:
               
chr12:37742464-37742321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr12:37536127-37536322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr12:30104005-30103801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
312-520
               

               
Cow position:
               
chr12:2734747-2734950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
312-673
               

               
Cow position:
               
chr12:35779756-35780109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr12:34333280-34332914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
313-450
               

               
Cow position:
               
chr12:37718605-37718748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr12:25417415-25417597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
313-533
               

               
Cow position:
               
chr12:24166787-24166999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr12:38679210-38679029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 140
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr12:2964208-2964017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr12:29180836-29180640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
314-525
               

               
Cow position:
               
chr12:48578997-48578797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
314-533
               

               
Cow position:
               
chr12:14986909-14986695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
314-643
               

               
Cow position:
               
chr12:36790651-36790972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
315-465
               

               
Cow position:
               
chr12:39320551-39320398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
315-471
               

               
Cow position:
               
chr12:36241226-36241379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
315-511
               

               
Cow position:
               
chr12:24397004-24397196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr12:17250665-17250481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr12:43619444-43619245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr12:11525430-11525645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr12:33625242-33625457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr12:43974453-43974231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr12:4594660-4594436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr12:29966266-29966040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
315-574
               

               
Cow position:
               
chr12:42749604-42749348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 144
               

               
Conread position:
               
315-597
               

               
Cow position:
               
chr12:33141962-33141677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
315-603
               

               
Cow position:
               
chr12:17478877-17479162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
315-612
               

               
Cow position:
               
chr12:18103456-18103743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 77
               

               
Conread position:
               
315-632
               

               
Cow position:
               
chr12:15038824-15039126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
315-643
               

               
Cow position:
               
chr12:41658560-41658884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
315-665
               

               
Cow position:
               
chr12:20776768-20777100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
315-667
               

               
Cow position:
               
chr12:3472833-3473169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
315-667
               

               
Cow position:
               
chr12:35310521-35310853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
315-668
               

               
Cow position:
               
chr12:33976364-33976020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
315-669
               

               
Cow position:
               
chr12:9710044-9710393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr12:30919595-30919237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 152
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr12:11587930-11587580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 34
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr12:12198748-12199091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr12:17080427-17080073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 208
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr12:41217229-41216884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr12:43789187-43788848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
317-510
               

               
Cow position:
               
chr12:30690716-30690907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
318-452
               

               
Cow position:
               
chr12:25299519-25299380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
318-494
               

               
Cow position:
               
chr12:46500661-46500827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr12:6666719-6666547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
318-517
               

               
Cow position:
               
chr12:11272671-11272865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
318-543
               

               
Cow position:
               
chr12:33949058-33948841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
318-615
               

               
Cow position:
               
chr12:1031122-1030845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
318-661
               

               
Cow position:
               
chr12:42174589-42174240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr12:12637027-12637374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr12:30806011-30805668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr12:17273726-17273539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
319-511
               

               
Cow position:
               
chr12:31841727-31841536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr12:17108311-17108126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
319-520
               

               
Cow position:
               
chr12:23106096-23105895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr12:19007781-19007977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr12:8859328-8859118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
319-542
               

               
Cow position:
               
chr12:31926012-31925789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
319-556
               

               
Cow position:
               
chr12:40157871-40158101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
219, 133
               

               
Conread position:
               
319-575
               

               
Cow position:
               
chr12:6688042-6687798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
319-577
               

               
Cow position:
               
chr12:31883503-31883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
319-622
               

               
Cow position:
               
chr12:26576049-26575746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
211, 91
               

               
Conread position:
               
319-627
               

               
Cow position:
               
chr12:37008553-37008850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
277, 133
               

               
Conread position:
               
319-638
               

               
Cow position:
               
chr12:3623848-3623538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
319-658
               

               
Cow position:
               
chr12:19697551-19697231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr12:15414714-15415050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
211, 17
               

               
Conread position:
               
319-669
               

               
Cow position:
               
chr12:4769076-4768744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
319-669
               

               
Cow position:
               
chr12:5635295-5635629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
319-669
               

               
Cow position:
               
chr12:5714775-5714446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr12:25989058-25989378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
319-671
               

               
Cow position:
               
chr12:30745873-30745532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr12:4162216-4162554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr12:6241481-6241126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr12:11836385-11836046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 22
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr12:18518829-18518479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
319-675
               

               
Cow position:
               
chr12:9229359-9229670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
320-520
               

               
Cow position:
               
chr12:43855046-43854852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
320-627
               

               
Cow position:
               
chr12:43559986-43560296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
321-503
               

               
Cow position:
               
chr12:4512296-4512475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
321-515
               

               
Cow position:
               
chr12:7501059-7500872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
146, 80
               

               
Conread position:
               
321-609
               

               
Cow position:
               
chr12:4341580-4341867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 126
               

               
Conread position:
               
321-630
               

               
Cow position:
               
chr12:24116218-24116512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
321-638
               

               
Cow position:
               
chr12:4596628-4596309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
63, 143
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr12:30210625-30210295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 66
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr12:36544490-36544836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 101
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr12:33400071-33400256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
324-584
               

               
Cow position:
               
chr12:21780316-21780062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
326-492
               

               
Cow position:
               
chr12:38552343-38552180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 128
               

               
Conread position:
               
326-665
               

               
Cow position:
               
chr12:15122475-15122142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
326-674
               

               
Cow position:
               
chr12:37993572-37993909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
327-513
               

               
Cow position:
               
chr12:44542412-44542231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
327-619
               

               
Cow position:
               
chr12:29674990-29675274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
327-625
               

               
Cow position:
               
chr12:30590918-30590624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
327-669
               

               
Cow position:
               
chr12:30194842-30194524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
228, 19
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr12:23574919-23574583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr12:43352083-43351913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
330-584
               

               
Cow position:
               
chr12:17270683-17270430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
330-584
               

               
Cow position:
               
chr12:23939365-23939121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
330-668
               

               
Cow position:
               
chr12:6410590-6410913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
330-670
               

               
Cow position:
               
chr12:9914927-9914604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
330-670
               

               
Cow position:
               
chr12:19866390-19866054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
331-515
               

               
Cow position:
               
chr12:41220867-41221046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
331-528
               

               
Cow position:
               
chr12:12532346-12532541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
335-674
               

               
Cow position:
               
chr12:28749085-28748751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
336-534
               

               
Cow position:
               
chr12:15389210-15389015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
336-545
               

               
Cow position:
               
chr12:6754331-6754131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
336-604
               

               
Cow position:
               
chr12:31517043-31517295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
336-632
               

               
Cow position:
               
chr12:17269941-17269649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
336-673
               

               
Cow position:
               
chr12:42180988-42181323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 120
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr12:24663260-24662931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
338-499
               

               
Cow position:
               
chr12:30649580-30649419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 120
               

               
Conread position:
               
338-509
               

               
Cow position:
               
chr12:18939005-18938837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
338-515
               

               
Cow position:
               
chr12:28506423-28506244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
338-530
               

               
Cow position:
               
chr12:30946884-30946691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
338-542
               

               
Cow position:
               
chr12:5459390-5459185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
338-577
               

               
Cow position:
               
chr12:46122803-46122567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
338-637
               

               
Cow position:
               
chr12:19400678-19400965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
338-655
               

               
Cow position:
               
chr12:40360825-40360519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
338-665
               

               
Cow position:
               
chr12:41091673-41091355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr12:16360004-16359687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
339-675
               

               
Cow position:
               
chr12:19154480-19154806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
342-499
               

               
Cow position:
               
chr12:11106444-11106602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
342-529
               

               
Cow position:
               
chr12:8153323-8153135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
342-539
               

               
Cow position:
               
chr12:11917980-11918165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
342-632
               

               
Cow position:
               
chr12:22287410-22287123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
342-648
               

               
Cow position:
               
chr12:6102693-6102991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
342-673
               

               
Cow position:
               
chr12:42254803-42254475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
344-486
               

               
Cow position:
               
chr12:11068546-11068410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
345-511
               

               
Cow position:
               
chr12:16386324-16386490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
345-515
               

               
Cow position:
               
chr12:21390005-21389834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
345-517
               

               
Cow position:
               
chr12:3586246-3586079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
345-661
               

               
Cow position:
               
chr12:20636019-20636333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr12:20850128-20849806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
346-628
               

               
Cow position:
               
chr12:19258409-19258133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
347-606
               

               
Cow position:
               
chr12:35652733-35652984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
347-607
               

               
Cow position:
               
chr12:37814493-37814749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
347-670
               

               
Cow position:
               
chr12:33323365-33323678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
347-671
               

               
Cow position:
               
chr12:30661820-30662133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
347-674
               

               
Cow position:
               
chr12:4866943-4866627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 105
               

               
Conread position:
               
347-675
               

               
Cow position:
               
chr12:11057000-11056692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
350-627
               

               
Cow position:
               
chr12:3371734-3372004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
352-524
               

               
Cow position:
               
chr12:22859583-22859421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
352-668
               

               
Cow position:
               
chr12:41159714-41159411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
354-655
               

               
Cow position:
               
chr12:20479215-20479493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
354-674
               

               
Cow position:
               
chr12:18020979-18020671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
365-622
               

               
Cow position:
               
chr12:3599652-3599892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
369-674
               

               
Cow position:
               
chr12:3197371-3197068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
237, 13
               

               
Conread position:
               
373-674
               

               
Cow position:
               
chr12:22882157-22881862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
374-668
               

               
Cow position:
               
chr12:30753820-30753538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
380-517
               

               
Cow position:
               
chr12:42143252-42143121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
380-674
               

               
Cow position:
               
chr12:29969671-29969393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
381-545
               

               
Cow position:
               
chr12:4797393-4797235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
381-545
               

               
Cow position:
               
chr12:7457453-7457610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-598
               

               
Cow position:
               
chr12:18572716-18572513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
381-603
               

               
Cow position:
               
chr12:31959971-31959766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
381-638
               

               
Cow position:
               
chr12:46120739-46120986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr12:7000513-7000788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr12:25321006-25320739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
381-671
               

               
Cow position:
               
chr12:41581203-41580932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
381-672
               

               
Cow position:
               
chr12:1773569-1773852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
381-673
               

               
Cow position:
               
chr12:5801133-5800848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr12:18765883-18766164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
157, 17
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr12:25445005-25444738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr12:28256963-28257237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr12:41474181-41473904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
382-641
               

               
Cow position:
               
chr12:38184685-38184440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
383-579
               

               
Cow position:
               
chr12:18523659-18523466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
383-670
               

               
Cow position:
               
chr12:11109844-11109581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
383-674
               

               
Cow position:
               
chr12:15173913-15173622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
252, 69
               

               
Conread position:
               
385-628
               

               
Cow position:
               
chr12:45090264-45090504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
386-662
               

               
Cow position:
               
chr12:44920115-44919859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
390-616
               

               
Cow position:
               
chr12:44733009-44733225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
390-673
               

               
Cow position:
               
chr12:29779831-29780088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
390-674
               

               
Cow position:
               
chr12:7978120-7977855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
390-674
               

               
Cow position:
               
chr12:19691151-19691421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
390-674
               

               
Cow position:
               
chr12:31429490-31429757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
391-667
               

               
Cow position:
               
chr12:2286663-2286404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 55
               

               
Conread position:
               
393-670
               

               
Cow position:
               
chr12:29483807-29484073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
170, 9
               

               
Conread position:
               
394-622
               

               
Cow position:
               
chr12:15700159-15699934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
394-628
               

               
Cow position:
               
chr12:18943579-18943804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
394-668
               

               
Cow position:
               
chr12:23798178-23797927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
395-660
               

               
Cow position:
               
chr12:42234137-42233883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
395-665
               

               
Cow position:
               
chr12:4821039-4820771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
398-674
               

               
Cow position:
               
chr12:28582434-28582689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
399-674
               

               
Cow position:
               
chr12:5906130-5905870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
399-674
               

               
Cow position:
               
chr12:24211481-24211233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
402-664
               

               
Cow position:
               
chr12:25340600-25340336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
402-673
               

               
Cow position:
               
chr12:23855903-23855649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
412-670
               

               
Cow position:
               
chr12:10491333-10491089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
413-669
               

               
Cow position:
               
chr12:33458207-33457963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
413-670
               

               
Cow position:
               
chr12:8868822-8869060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
415-622
               

               
Cow position:
               
chr12:9894840-9894644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
418-673
               

               
Cow position:
               
chr12:34007356-34007117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
422-674
               

               
Cow position:
               
chr12:12578983-12579212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
457-610
               

               
Cow position:
               
chr12:37137505-37137651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
457-670
               

               
Cow position:
               
chr12:40028733-40028943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 97
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr12:3906494-3906285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr12:20326795-20326587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr12:34673319-34673527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
458-670
               

               
Cow position:
               
chr12:12178943-12178739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
467-669
               

               
Cow position:
               
chr12:29921774-29921964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
467-674
               

               
Cow position:
               
chr12:3510572-3510380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
484-674
               

               
Cow position:
               
chr12:30476475-30476294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
485-672
               

               
Cow position:
               
chr12:27562835-27563019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
494-674
               

               
Cow position:
               
chr12:11583374-11583210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
498-670
               

               
Cow position:
               
chr12:3039491-3039317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
499-674
               

               
Cow position:
               
chr12:38511857-38512029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
500-672
               

               
Cow position:
               
chr12:25456097-25455933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
500-673
               

               
Cow position:
               
chr12:22047448-22047287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr12:25820452-25820618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr12:28650935-28650769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
501-674
               

               
Cow position:
               
chr12:5639124-5638956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
503-670
               

               
Cow position:
               
chr12:18021567-18021411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
505-674
               

               
Cow position:
               
chr12:17702253-17702416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
509-674
               

               
Cow position:
               
chr12:46143791-46143634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
512-674
               

               
Cow position:
               
chr12:7191296-7191449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               
Show alignments to all cow chromosomes.