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Cow genome map

           
Conread name:
           
Lng1-LNG010084D02
        

               
Conread position:
               
262-544
               

               
Cow position:
               
chr15:50674752-50675032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
227, 62
               

               
Conread position:
               
264-553
               

               
Cow position:
               
chr15:16530933-16530641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
275-519
               

               
Cow position:
               
chr15:40562833-40562591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
275-582
               

               
Cow position:
               
chr15:19554077-19553772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
277-585
               

               
Cow position:
               
chr15:19942447-19942753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
279-481
               

               
Cow position:
               
chr15:4284226-4284428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
282-674
               

               
Cow position:
               
chr15:23572831-23572441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
285-666
               

               
Cow position:
               
chr15:14576190-14576564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
286-545
               

               
Cow position:
               
chr15:42380787-42381044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
286-674
               

               
Cow position:
               
chr15:608004-608384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 172
               

               
Conread position:
               
286-674
               

               
Cow position:
               
chr15:45584579-45584959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
287-509
               

               
Cow position:
               
chr15:12045683-12045455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
287-595
               

               
Cow position:
               
chr15:15987032-15986719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
287-666
               

               
Cow position:
               
chr15:22553681-22553313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 170
               

               
Conread position:
               
287-673
               

               
Cow position:
               
chr15:21366327-21365955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 18
               

               
Conread position:
               
288-638
               

               
Cow position:
               
chr15:51307809-51307473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
289-492
               

               
Cow position:
               
chr15:8715320-8715117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
289-669
               

               
Cow position:
               
chr15:27900639-27900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
289-674
               

               
Cow position:
               
chr15:21420816-21421181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
290-506
               

               
Cow position:
               
chr15:7916699-7916483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
290-510
               

               
Cow position:
               
chr15:17853852-17853639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
290-520
               

               
Cow position:
               
chr15:18763174-18762946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
291-487
               

               
Cow position:
               
chr15:18941901-18942090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
291-516
               

               
Cow position:
               
chr15:17124605-17124379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 167
               

               
Conread position:
               
291-669
               

               
Cow position:
               
chr15:33624837-33625183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
291-673
               

               
Cow position:
               
chr15:21893646-21894018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 166
               

               
Conread position:
               
291-674
               

               
Cow position:
               
chr15:43827905-43827536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
292-441
               

               
Cow position:
               
chr15:36539812-36539963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
292-505
               

               
Cow position:
               
chr15:44977679-44977894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr15:5627175-5626947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
292-529
               

               
Cow position:
               
chr15:13553969-13554210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
292-649
               

               
Cow position:
               
chr15:39326636-39326299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
292-674
               

               
Cow position:
               
chr15:6905406-6905775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr15:14880462-14880271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
293-504
               

               
Cow position:
               
chr15:39892960-39892748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 165
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr15:16246459-16246679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 167
               

               
Conread position:
               
293-516
               

               
Cow position:
               
chr15:13184752-13184532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
293-516
               

               
Cow position:
               
chr15:52791809-52792026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
293-529
               

               
Cow position:
               
chr15:18605275-18605509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
293-577
               

               
Cow position:
               
chr15:20723113-20722843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
293-579
               

               
Cow position:
               
chr15:11614224-11613942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
293-674
               

               
Cow position:
               
chr15:33642960-33643327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
294-473
               

               
Cow position:
               
chr15:15680977-15680795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
294-473
               

               
Cow position:
               
chr15:22242270-22242450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
294-534
               

               
Cow position:
               
chr15:11909078-11908844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 161
               

               
Conread position:
               
294-539
               

               
Cow position:
               
chr15:7479129-7478882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr15:45245672-45245309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
224, 158
               

               
Conread position:
               
295-429
               

               
Cow position:
               
chr15:37237536-37237676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
295-450
               

               
Cow position:
               
chr15:47920280-47920122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
295-501
               

               
Cow position:
               
chr15:33784953-33784745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
295-503
               

               
Cow position:
               
chr15:40082854-40083061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr15:18718593-18718371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 164
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr15:25595660-25595440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr15:42704666-42704887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
295-529
               

               
Cow position:
               
chr15:26442083-26442317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
295-545
               

               
Cow position:
               
chr15:9978973-9979218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
295-551
               

               
Cow position:
               
chr15:10423054-10423317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 171
               

               
Conread position:
               
295-607
               

               
Cow position:
               
chr15:27230635-27230938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
295-616
               

               
Cow position:
               
chr15:5409027-5408724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
295-616
               

               
Cow position:
               
chr15:19950360-19950658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
260, 17
               

               
Conread position:
               
295-621
               

               
Cow position:
               
chr15:40230988-40231307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 164
               

               
Conread position:
               
295-663
               

               
Cow position:
               
chr15:49273833-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
295-669
               

               
Cow position:
               
chr15:16017902-16018267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 167
               

               
Conread position:
               
295-670
               

               
Cow position:
               
chr15:45552-45183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
295-673
               

               
Cow position:
               
chr15:21822054-21821688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr15:4862037-4861676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr15:11560646-11560274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr15:21941976-21941609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr15:27973336-27972977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr15:36435073-36435444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
296-513
               

               
Cow position:
               
chr15:44449803-44450021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
296-584
               

               
Cow position:
               
chr15:15177189-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
296-587
               

               
Cow position:
               
chr15:25571941-25571652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 162
               

               
Conread position:
               
296-621
               

               
Cow position:
               
chr15:4919199-4918877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
296-643
               

               
Cow position:
               
chr15:1857600-1857939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr15:286344-286716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr15:16822819-16823175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr15:23697032-23696673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr15:38161873-38162244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr15:45478870-45479244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
297-469
               

               
Cow position:
               
chr15:26380878-26380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
297-471
               

               
Cow position:
               
chr15:14760768-14760593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
297-486
               

               
Cow position:
               
chr15:13846694-13846509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr15:17140143-17139958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
297-495
               

               
Cow position:
               
chr15:45574756-45574568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
297-504
               

               
Cow position:
               
chr15:9314597-9314803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
297-511
               

               
Cow position:
               
chr15:43715201-43715411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr15:25877312-25877528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
297-516
               

               
Cow position:
               
chr15:37070016-37069797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr15:697853-698084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr15:8464261-8464028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 162
               

               
Conread position:
               
297-531
               

               
Cow position:
               
chr15:26896826-26896591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
297-534
               

               
Cow position:
               
chr15:48095228-48095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
297-539
               

               
Cow position:
               
chr15:22444114-22443876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
297-544
               

               
Cow position:
               
chr15:7751045-7750796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
297-552
               

               
Cow position:
               
chr15:1284133-1284399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
297-558
               

               
Cow position:
               
chr15:26851353-26851097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
297-566
               

               
Cow position:
               
chr15:20856607-20856339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 161
               

               
Conread position:
               
297-575
               

               
Cow position:
               
chr15:31416297-31416021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
297-597
               

               
Cow position:
               
chr15:40015133-40014834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 165
               

               
Conread position:
               
297-614
               

               
Cow position:
               
chr15:5719933-5719625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
297-617
               

               
Cow position:
               
chr15:53028234-53028561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 159
               

               
Conread position:
               
297-643
               

               
Cow position:
               
chr15:6227304-6226978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
297-665
               

               
Cow position:
               
chr15:2968206-2968565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
297-665
               

               
Cow position:
               
chr15:36353543-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr15:28924890-28924530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 165
               

               
Conread position:
               
297-671
               

               
Cow position:
               
chr15:22938896-22938535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr15:22531546-22531894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr15:23114706-23115081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr15:35641886-35642258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
298-484
               

               
Cow position:
               
chr15:17866430-17866244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr15:41321079-41320876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
173, 157
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr15:11564171-11564378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
298-514
               

               
Cow position:
               
chr15:44809939-44810154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
298-520
               

               
Cow position:
               
chr15:46364646-46364865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
298-529
               

               
Cow position:
               
chr15:19976422-19976653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
298-532
               

               
Cow position:
               
chr15:34553016-34552785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
298-532
               

               
Cow position:
               
chr15:41023746-41023512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
298-550
               

               
Cow position:
               
chr15:15154173-15154423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
298-607
               

               
Cow position:
               
chr15:33178552-33178249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
298-622
               

               
Cow position:
               
chr15:38935279-38935598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
298-639
               

               
Cow position:
               
chr15:16928218-16927890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
298-654
               

               
Cow position:
               
chr15:26573272-26573596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr15:24616439-24616811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr15:25667353-25666985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr15:33284751-33285119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
298-677
               

               
Cow position:
               
chr15:225930-225567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
299-484
               

               
Cow position:
               
chr15:26127957-26127769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
299-509
               

               
Cow position:
               
chr15:44119593-44119389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
299-511
               

               
Cow position:
               
chr15:41475958-41475746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
299-514
               

               
Cow position:
               
chr15:2522487-2522691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
299-546
               

               
Cow position:
               
chr15:49491526-49491763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
228, 45
               

               
Conread position:
               
299-578
               

               
Cow position:
               
chr15:8127781-8128067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
299-627
               

               
Cow position:
               
chr15:36793617-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
299-633
               

               
Cow position:
               
chr15:43674073-43673736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
299-665
               

               
Cow position:
               
chr15:22939451-22939096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr15:18975890-18975528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr15:22530955-22531299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr15:39405616-39405969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 158
               

               
Conread position:
               
300-445
               

               
Cow position:
               
chr15:11635293-11635435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
300-480
               

               
Cow position:
               
chr15:20566003-20566184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
300-481
               

               
Cow position:
               
chr15:25696425-25696243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
300-492
               

               
Cow position:
               
chr15:11072320-11072135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr15:48052722-48052529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr15:36346669-36346861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
300-513
               

               
Cow position:
               
chr15:37719712-37719508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
300-520
               

               
Cow position:
               
chr15:3591278-3591483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr15:4789095-4788733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr15:37381507-37381865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr15:44658241-44658595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
301-535
               

               
Cow position:
               
chr15:9921887-9921660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
301-668
               

               
Cow position:
               
chr15:19771013-19771365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
301-668
               

               
Cow position:
               
chr15:50957933-50957565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
301-670
               

               
Cow position:
               
chr15:20534577-20534211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
301-672
               

               
Cow position:
               
chr15:1804459-1804096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr15:43634155-43633766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
302-416
               

               
Cow position:
               
chr15:38907665-38907778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
302-429
               

               
Cow position:
               
chr15:20649441-20649575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr15:21942926-21943133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
302-539
               

               
Cow position:
               
chr15:38820579-38820808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
208, 81
               

               
Conread position:
               
302-665
               

               
Cow position:
               
chr15:4418525-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
302-668
               

               
Cow position:
               
chr15:10088196-10088551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
302-673
               

               
Cow position:
               
chr15:17084083-17084445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 152
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr15:5726192-5726562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr15:22984447-22984692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
303-666
               

               
Cow position:
               
chr15:17233063-17233423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
304-508
               

               
Cow position:
               
chr15:12974209-12974420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 145
               

               
Conread position:
               
304-514
               

               
Cow position:
               
chr15:17621443-17621235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
304-622
               

               
Cow position:
               
chr15:33693496-33693172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
304-674
               

               
Cow position:
               
chr15:36391550-36391905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr15:20906149-20906004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-483
               

               
Cow position:
               
chr15:30956445-30956267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr15:25366185-25366001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 153
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr15:16415176-16415370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
305-513
               

               
Cow position:
               
chr15:29927841-29928054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
305-525
               

               
Cow position:
               
chr15:7811654-7811432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
305-543
               

               
Cow position:
               
chr15:47844208-47843979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
305-595
               

               
Cow position:
               
chr15:36846307-36846011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
305-605
               

               
Cow position:
               
chr15:13432362-13432667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
305-610
               

               
Cow position:
               
chr15:50552654-50552350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
305-655
               

               
Cow position:
               
chr15:20314361-20314707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
305-664
               

               
Cow position:
               
chr15:6647330-6647677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
305-671
               

               
Cow position:
               
chr15:38652726-38652358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr15:17100825-17100472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr15:24967681-24968031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
333, 107
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr15:40798539-40798191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
306-516
               

               
Cow position:
               
chr15:26617816-26618027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
306-534
               

               
Cow position:
               
chr15:39474056-39473828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
306-593
               

               
Cow position:
               
chr15:38827434-38827163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
306-603
               

               
Cow position:
               
chr15:21803781-21803489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
306-664
               

               
Cow position:
               
chr15:20482947-20482613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr15:7429847-7430215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr15:19186742-19186381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr15:23275410-23275772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr15:46563596-46563256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
307-480
               

               
Cow position:
               
chr15:44402068-44401896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
308-668
               

               
Cow position:
               
chr15:1330225-1329871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
308-674
               

               
Cow position:
               
chr15:14740804-14740434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 150
               

               
Conread position:
               
309-505
               

               
Cow position:
               
chr15:25358117-25358313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
309-667
               

               
Cow position:
               
chr15:662580-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
310-446
               

               
Cow position:
               
chr15:17471812-17471948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr15:48351020-48351199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr15:50163000-50163185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
310-667
               

               
Cow position:
               
chr15:31857474-31857819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
310-670
               

               
Cow position:
               
chr15:10246109-10245772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
310-672
               

               
Cow position:
               
chr15:38837629-38837982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr15:32324322-32323967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr15:14969404-14969604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr15:38420669-38420466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
312-513
               

               
Cow position:
               
chr15:21710222-21710021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
312-595
               

               
Cow position:
               
chr15:42888948-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
312-632
               

               
Cow position:
               
chr15:31929011-31928698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
312-657
               

               
Cow position:
               
chr15:10231856-10231521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
224, 73
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr15:30047667-30047305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
313-508
               

               
Cow position:
               
chr15:44089277-44089081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
313-601
               

               
Cow position:
               
chr15:41625010-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr15:8665719-8665344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr15:44377159-44377513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
314-579
               

               
Cow position:
               
chr15:52316949-52317206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
213, 94
               

               
Conread position:
               
314-662
               

               
Cow position:
               
chr15:40957467-40957803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
315-450
               

               
Cow position:
               
chr15:41348260-41348402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr15:35577083-35577281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr15:39299427-39299237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr15:32205267-32205071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
315-518
               

               
Cow position:
               
chr15:6082710-6082506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-520
               

               
Cow position:
               
chr15:24462412-24462620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr15:2931681-2931471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
315-530
               

               
Cow position:
               
chr15:40490255-40490040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-542
               

               
Cow position:
               
chr15:14474230-14474455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
315-560
               

               
Cow position:
               
chr15:8679869-8679626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-577
               

               
Cow position:
               
chr15:31028770-31028510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
315-578
               

               
Cow position:
               
chr15:52909-53168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
315-587
               

               
Cow position:
               
chr15:4076221-4076480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
315-610
               

               
Cow position:
               
chr15:29686452-29686731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
315-614
               

               
Cow position:
               
chr15:37865250-37865552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
315-623
               

               
Cow position:
               
chr15:20390820-20390515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
315-627
               

               
Cow position:
               
chr15:19807833-19807522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr15:29810015-29810314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
315-638
               

               
Cow position:
               
chr15:5717609-5717916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 72
               

               
Conread position:
               
315-645
               

               
Cow position:
               
chr15:6233125-6232804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
315-650
               

               
Cow position:
               
chr15:34478578-34478909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
315-658
               

               
Cow position:
               
chr15:48851603-48851268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
315-659
               

               
Cow position:
               
chr15:5683027-5683371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 134
               

               
Conread position:
               
315-660
               

               
Cow position:
               
chr15:18017817-18018147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
315-665
               

               
Cow position:
               
chr15:28823922-28823590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
315-668
               

               
Cow position:
               
chr15:53037072-53036737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
212, 137
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr15:21832554-21832191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr15:20422875-20422543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr15:51822040-51822380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:795127-794779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:1722951-1722613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:4295650-4296002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:11996138-11995788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:12722974-12723325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:16112284-16112639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:16439944-16439591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:20370562-20370219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 137
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:20472654-20472311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:30799787-30800117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:32980144-32979800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:36259707-36259365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:43031136-43030787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 146
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:43914208-43913850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr15:51427936-51427585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 90
               

               
Conread position:
               
315-675
               

               
Cow position:
               
chr15:8006868-8007220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
315-675
               

               
Cow position:
               
chr15:20290168-20289833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
316-674
               

               
Cow position:
               
chr15:16667607-16667265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
318-671
               

               
Cow position:
               
chr15:26158706-26158382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
318-673
               

               
Cow position:
               
chr15:23798629-23798287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 71
               

               
Conread position:
               
319-480
               

               
Cow position:
               
chr15:840253-840095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr15:12913605-12913424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
319-517
               

               
Cow position:
               
chr15:4500592-4500795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
319-529
               

               
Cow position:
               
chr15:50332869-50333082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 142
               

               
Conread position:
               
319-545
               

               
Cow position:
               
chr15:8636400-8636177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
319-545
               

               
Cow position:
               
chr15:40835009-40835229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
319-570
               

               
Cow position:
               
chr15:36388193-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
319-579
               

               
Cow position:
               
chr15:3695531-3695782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
319-584
               

               
Cow position:
               
chr15:38860238-38859976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
319-598
               

               
Cow position:
               
chr15:41528072-41527810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
319-609
               

               
Cow position:
               
chr15:25349868-25350143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
319-626
               

               
Cow position:
               
chr15:28047867-28047560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
319-631
               

               
Cow position:
               
chr15:36643952-36643657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
319-635
               

               
Cow position:
               
chr15:39286517-39286207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
319-665
               

               
Cow position:
               
chr15:9648795-9648476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
319-665
               

               
Cow position:
               
chr15:17870398-17870057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
319-668
               

               
Cow position:
               
chr15:43626358-43626700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr15:36887733-36888059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr15:49922029-49922377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:14020391-14020710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:20459417-20459062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:25208865-25208531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:30001590-30001923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:31137571-31137227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr15:50322505-50322833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
320-516
               

               
Cow position:
               
chr15:28099007-28099201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
320-535
               

               
Cow position:
               
chr15:21363058-21362847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
321-619
               

               
Cow position:
               
chr15:52126794-52126502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr15:85350-85011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
323-515
               

               
Cow position:
               
chr15:29793304-29793105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
323-674
               

               
Cow position:
               
chr15:16657368-16657731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 234
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr15:16230128-16230300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
324-674
               

               
Cow position:
               
chr15:50302086-50302421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
326-608
               

               
Cow position:
               
chr15:36776170-36776450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 132
               

               
Conread position:
               
326-614
               

               
Cow position:
               
chr15:11424874-11425155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
326-622
               

               
Cow position:
               
chr15:25906819-25907108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
212, 67
               

               
Conread position:
               
326-657
               

               
Cow position:
               
chr15:9622080-9622410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 131
               

               
Conread position:
               
326-670
               

               
Cow position:
               
chr15:5420981-5420652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 115
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr15:41049555-41049410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
327-529
               

               
Cow position:
               
chr15:33662413-33662616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
327-544
               

               
Cow position:
               
chr15:4485050-4485271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
327-584
               

               
Cow position:
               
chr15:43114816-43114569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
327-621
               

               
Cow position:
               
chr15:40379114-40379401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
327-622
               

               
Cow position:
               
chr15:9465576-9465868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
327-669
               

               
Cow position:
               
chr15:4138036-4138366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr15:915949-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr15:4179037-4178704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 71
               

               
Conread position:
               
327-671
               

               
Cow position:
               
chr15:34896663-34896997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr15:1297648-1297975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr15:22532155-22532475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
330-486
               

               
Cow position:
               
chr15:36457712-36457564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
330-536
               

               
Cow position:
               
chr15:26529800-26529999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
330-537
               

               
Cow position:
               
chr15:6037541-6037345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
330-545
               

               
Cow position:
               
chr15:10880976-10880768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
330-628
               

               
Cow position:
               
chr15:14888732-14888444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
206, 62
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr15:6969892-6970220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr15:8353946-8354281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr15:17196050-17196379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
331-497
               

               
Cow position:
               
chr15:16644882-16644716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
331-678
               

               
Cow position:
               
chr15:5158277-5158623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
332-674
               

               
Cow position:
               
chr15:52482922-52482593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
332-674
               

               
Cow position:
               
chr15:53163927-53164256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
334-576
               

               
Cow position:
               
chr15:40947469-40947227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 125
               

               
Conread position:
               
336-563
               

               
Cow position:
               
chr15:24982268-24982041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
336-628
               

               
Cow position:
               
chr15:34284499-34284215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
336-665
               

               
Cow position:
               
chr15:26903104-26903425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
336-667
               

               
Cow position:
               
chr15:18671538-18671222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
336-668
               

               
Cow position:
               
chr15:36621311-36621649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
336-669
               

               
Cow position:
               
chr15:16603740-16604055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
221, 52
               

               
Conread position:
               
336-670
               

               
Cow position:
               
chr15:21583016-21582685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr15:17762819-17763144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr15:38883053-38883390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
337-545
               

               
Cow position:
               
chr15:24031109-24031317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
338-515
               

               
Cow position:
               
chr15:4886016-4886193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
338-529
               

               
Cow position:
               
chr15:13701859-13701667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
338-545
               

               
Cow position:
               
chr15:34273711-34273922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
338-552
               

               
Cow position:
               
chr15:31283295-31283513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr15:2953220-2952891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr15:5443894-5444218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr15:32241888-32242216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr15:38806592-38806261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
341-668
               

               
Cow position:
               
chr15:26912157-26911847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
342-545
               

               
Cow position:
               
chr15:52432255-52432464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
342-622
               

               
Cow position:
               
chr15:39833061-39832783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
342-674
               

               
Cow position:
               
chr15:25585175-25584855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
342-678
               

               
Cow position:
               
chr15:7308241-7307911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
343-525
               

               
Cow position:
               
chr15:45160391-45160210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
343-674
               

               
Cow position:
               
chr15:12785345-12785670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
344-644
               

               
Cow position:
               
chr15:50664551-50664273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
290, 58
               

               
Conread position:
               
344-670
               

               
Cow position:
               
chr15:6462574-6462263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
344-670
               

               
Cow position:
               
chr15:21907862-21908169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
345-535
               

               
Cow position:
               
chr15:39520077-39520276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
345-584
               

               
Cow position:
               
chr15:13395468-13395703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
345-614
               

               
Cow position:
               
chr15:24453157-24452877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
345-665
               

               
Cow position:
               
chr15:17337289-17337587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
345-668
               

               
Cow position:
               
chr15:23866152-23865836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr15:34139908-34140215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr15:39619059-39619392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
346-521
               

               
Cow position:
               
chr15:34223786-34223960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
346-669
               

               
Cow position:
               
chr15:38037027-38036706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
346-674
               

               
Cow position:
               
chr15:1083452-1083138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
347-529
               

               
Cow position:
               
chr15:864102-864280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
347-598
               

               
Cow position:
               
chr15:32226944-32226701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
347-668
               

               
Cow position:
               
chr15:11559432-11559123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
347-670
               

               
Cow position:
               
chr15:39599369-39599675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
348-672
               

               
Cow position:
               
chr15:35112952-35112642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
349-670
               

               
Cow position:
               
chr15:50341037-50341354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
350-674
               

               
Cow position:
               
chr15:50265563-50265252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
352-667
               

               
Cow position:
               
chr15:36773761-36773467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
242, 41
               

               
Conread position:
               
352-673
               

               
Cow position:
               
chr15:25386365-25386679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
354-667
               

               
Cow position:
               
chr15:9106970-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
376-584
               

               
Cow position:
               
chr15:19920380-19920182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
376-669
               

               
Cow position:
               
chr15:2145185-2144898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
376-671
               

               
Cow position:
               
chr15:37205000-37205279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
379-595
               

               
Cow position:
               
chr15:31024952-31025156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
380-674
               

               
Cow position:
               
chr15:10608345-10608068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
176, 10
               

               
Conread position:
               
381-622
               

               
Cow position:
               
chr15:12607-12841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr15:23780108-23779872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
381-665
               

               
Cow position:
               
chr15:42789189-42788922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr15:13554313-13554586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr15:39621297-39621577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
381-671
               

               
Cow position:
               
chr15:10335715-10335991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr15:2141344-2141062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr15:33303281-33303569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr15:39316883-39316597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
382-670
               

               
Cow position:
               
chr15:42415214-42415492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
383-670
               

               
Cow position:
               
chr15:51898189-51898464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
384-567
               

               
Cow position:
               
chr15:14261295-14261124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
384-621
               

               
Cow position:
               
chr15:5929859-5930080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
384-622
               

               
Cow position:
               
chr15:35441116-35440885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
384-665
               

               
Cow position:
               
chr15:6530886-6530620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
384-674
               

               
Cow position:
               
chr15:33976733-33976451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
386-597
               

               
Cow position:
               
chr15:14176535-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
387-584
               

               
Cow position:
               
chr15:9497535-9497347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
389-674
               

               
Cow position:
               
chr15:12870897-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
390-631
               

               
Cow position:
               
chr15:35205184-35204949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
392-674
               

               
Cow position:
               
chr15:47843281-47843020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
393-656
               

               
Cow position:
               
chr15:28258486-28258230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
241, 59
               

               
Conread position:
               
394-584
               

               
Cow position:
               
chr15:6272915-6272735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
394-664
               

               
Cow position:
               
chr15:35945502-35945753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
394-674
               

               
Cow position:
               
chr15:41000097-40999831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
395-631
               

               
Cow position:
               
chr15:41418856-41418632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
395-674
               

               
Cow position:
               
chr15:22136663-22136920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
395-674
               

               
Cow position:
               
chr15:34207214-34206951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
398-670
               

               
Cow position:
               
chr15:53045901-53045645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
402-668
               

               
Cow position:
               
chr15:50088960-50089214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
406-673
               

               
Cow position:
               
chr15:20351816-20352066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
418-668
               

               
Cow position:
               
chr15:4534907-4535142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
418-669
               

               
Cow position:
               
chr15:13387073-13387312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
419-670
               

               
Cow position:
               
chr15:6657096-6657341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
220, 24
               

               
Conread position:
               
420-674
               

               
Cow position:
               
chr15:23768259-23768025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
424-632
               

               
Cow position:
               
chr15:12359036-12359236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
426-674
               

               
Cow position:
               
chr15:5566924-5567180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
451-674
               

               
Cow position:
               
chr15:24941347-24941138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
457-669
               

               
Cow position:
               
chr15:9000981-9001193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
457-670
               

               
Cow position:
               
chr15:5535789-5535991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
457-671
               

               
Cow position:
               
chr15:13515396-13515603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
457-673
               

               
Cow position:
               
chr15:27280901-27281105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr15:5632711-5632916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr15:17859196-17859000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
463-674
               

               
Cow position:
               
chr15:38877268-38877069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
464-654
               

               
Cow position:
               
chr15:16448720-16448907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
465-674
               

               
Cow position:
               
chr15:9871376-9871176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
467-674
               

               
Cow position:
               
chr15:19119572-19119366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
469-670
               

               
Cow position:
               
chr15:36782283-36782094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
473-669
               

               
Cow position:
               
chr15:11646446-11646255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
475-674
               

               
Cow position:
               
chr15:14856419-14856230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
476-674
               

               
Cow position:
               
chr15:37716884-37716687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
483-674
               

               
Cow position:
               
chr15:40009598-40009412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
495-674
               

               
Cow position:
               
chr15:10845787-10845960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
498-670
               

               
Cow position:
               
chr15:13684197-13684033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
498-670
               

               
Cow position:
               
chr15:16936777-16936607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
500-665
               

               
Cow position:
               
chr15:23927401-23927238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr15:6046243-6046074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr15:34145081-34144917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
548-674
               

               
Cow position:
               
chr15:36346876-36347003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.