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Cow genome map

           
Conread name:
           
Lng1-LNG010084D02
        

               
Conread position:
               
233-643
               

               
Cow position:
               
chr18:9089939-9089544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
267-628
               

               
Cow position:
               
chr18:4264183-4264531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
269-516
               

               
Cow position:
               
chr18:45186075-45185838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
273-485
               

               
Cow position:
               
chr18:47175172-47175383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
276-622
               

               
Cow position:
               
chr18:42988103-42988447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
282-650
               

               
Cow position:
               
chr18:2151766-2151422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
282-659
               

               
Cow position:
               
chr18:55701464-55701819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
282-671
               

               
Cow position:
               
chr18:18592660-18592298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
283-674
               

               
Cow position:
               
chr18:48713741-48713368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
284-510
               

               
Cow position:
               
chr18:2108449-2108220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
284-628
               

               
Cow position:
               
chr18:19688225-19687880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 175
               

               
Conread position:
               
284-672
               

               
Cow position:
               
chr18:12117661-12118019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
285-515
               

               
Cow position:
               
chr18:18664168-18664405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 179
               

               
Conread position:
               
285-527
               

               
Cow position:
               
chr18:18844209-18843970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
285-634
               

               
Cow position:
               
chr18:48242385-48242043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
285-674
               

               
Cow position:
               
chr18:44137690-44137313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 129
               

               
Conread position:
               
286-510
               

               
Cow position:
               
chr18:22328338-22328116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
286-595
               

               
Cow position:
               
chr18:47486245-47485945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
286-615
               

               
Cow position:
               
chr18:34813852-34813524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 261
               

               
Conread position:
               
286-665
               

               
Cow position:
               
chr18:51405722-51406083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 60
               

               
Conread position:
               
287-511
               

               
Cow position:
               
chr18:49161112-49161331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
287-536
               

               
Cow position:
               
chr18:11233615-11233363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
287-638
               

               
Cow position:
               
chr18:5632457-5632115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
287-671
               

               
Cow position:
               
chr18:42431902-42432272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
236, 29
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr18:39114926-39115321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr18:43822761-43823130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
288-632
               

               
Cow position:
               
chr18:30405463-30405807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 172
               

               
Conread position:
               
289-674
               

               
Cow position:
               
chr18:43283564-43283939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
290-618
               

               
Cow position:
               
chr18:53053033-53053373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
291-479
               

               
Cow position:
               
chr18:21050898-21051079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
291-480
               

               
Cow position:
               
chr18:44514282-44514089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 170
               

               
Conread position:
               
291-503
               

               
Cow position:
               
chr18:30786921-30786720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr18:11857086-11856864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
291-584
               

               
Cow position:
               
chr18:22180588-22180881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
291-588
               

               
Cow position:
               
chr18:47417191-47416893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
292-519
               

               
Cow position:
               
chr18:41703026-41702801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
292-622
               

               
Cow position:
               
chr18:23623440-23623767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
292-643
               

               
Cow position:
               
chr18:4884328-4884666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
292-674
               

               
Cow position:
               
chr18:45903705-45904075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr18:45897913-45897716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
293-508
               

               
Cow position:
               
chr18:697033-697242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
293-515
               

               
Cow position:
               
chr18:23809931-23810152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
293-669
               

               
Cow position:
               
chr18:29080986-29080646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr18:33364397-33364240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
294-530
               

               
Cow position:
               
chr18:6470279-6470048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
294-671
               

               
Cow position:
               
chr18:10576289-10575930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
203, 24
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr18:26354855-26355211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr18:29372059-29371687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 165
               

               
Conread position:
               
295-429
               

               
Cow position:
               
chr18:32960264-32960126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
295-492
               

               
Cow position:
               
chr18:14587459-14587262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
295-510
               

               
Cow position:
               
chr18:8975579-8975370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
295-510
               

               
Cow position:
               
chr18:53795668-53795458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
295-527
               

               
Cow position:
               
chr18:19796731-19796967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
295-529
               

               
Cow position:
               
chr18:32253317-32253555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
295-598
               

               
Cow position:
               
chr18:42212633-42212334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
295-664
               

               
Cow position:
               
chr18:12273840-12273481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
295-670
               

               
Cow position:
               
chr18:39811398-39811748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr18:22120698-22121062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
296-495
               

               
Cow position:
               
chr18:27637675-27637480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
296-499
               

               
Cow position:
               
chr18:39860592-39860787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
296-520
               

               
Cow position:
               
chr18:23649115-23648885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
296-525
               

               
Cow position:
               
chr18:35827193-35827414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
296-533
               

               
Cow position:
               
chr18:2793793-2794020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
296-544
               

               
Cow position:
               
chr18:23941431-23941682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
296-559
               

               
Cow position:
               
chr18:40280911-40281176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
296-643
               

               
Cow position:
               
chr18:728203-727884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
296-654
               

               
Cow position:
               
chr18:51515079-51515428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
296-673
               

               
Cow position:
               
chr18:7951305-7950937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr18:19849586-19849937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
297-471
               

               
Cow position:
               
chr18:34389197-34389371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
297-479
               

               
Cow position:
               
chr18:36098542-36098370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
297-488
               

               
Cow position:
               
chr18:22045225-22045418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 163
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr18:14201056-14201252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr18:16382044-16381849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
297-502
               

               
Cow position:
               
chr18:32176-31973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr18:21751565-21751345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
297-528
               

               
Cow position:
               
chr18:21969617-21969848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr18:48441970-48441742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
297-560
               

               
Cow position:
               
chr18:5600822-5600561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
297-575
               

               
Cow position:
               
chr18:16812339-16812063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
297-577
               

               
Cow position:
               
chr18:19868075-19868353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
297-578
               

               
Cow position:
               
chr18:25598054-25598332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
297-579
               

               
Cow position:
               
chr18:12775594-12775877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
297-608
               

               
Cow position:
               
chr18:23163080-23162772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 168
               

               
Conread position:
               
297-621
               

               
Cow position:
               
chr18:55549916-55549595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
297-626
               

               
Cow position:
               
chr18:4668323-4668638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
297-638
               

               
Cow position:
               
chr18:6005314-6005645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
297-643
               

               
Cow position:
               
chr18:42290144-42290478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
297-649
               

               
Cow position:
               
chr18:30225345-30225701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
297-664
               

               
Cow position:
               
chr18:55693002-55692646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
297-668
               

               
Cow position:
               
chr18:31672334-31672689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
297-669
               

               
Cow position:
               
chr18:4748703-4749054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr18:17649556-17649918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr18:44262808-44262449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr18:247512-247864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr18:4495706-4496069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr18:15613685-15614040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr18:51827463-51827111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 149
               

               
Conread position:
               
298-469
               

               
Cow position:
               
chr18:10757874-10758041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
298-495
               

               
Cow position:
               
chr18:4000533-4000334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 159
               

               
Conread position:
               
298-495
               

               
Cow position:
               
chr18:21401115-21401313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 160
               

               
Conread position:
               
298-505
               

               
Cow position:
               
chr18:14871421-14871631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 158
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr18:36224915-36224699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr18:237930-238145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr18:4485779-4485570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 154
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr18:11330407-11330190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
298-514
               

               
Cow position:
               
chr18:49970465-49970684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr18:56463545-56463762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 159
               

               
Conread position:
               
298-536
               

               
Cow position:
               
chr18:46880526-46880758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
298-620
               

               
Cow position:
               
chr18:7965413-7965099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr18:54130157-54130478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
298-643
               

               
Cow position:
               
chr18:43951011-43950668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
298-663
               

               
Cow position:
               
chr18:52684419-52684778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr18:17390804-17391158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr18:29648964-29648604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr18:39623986-39623617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
299-499
               

               
Cow position:
               
chr18:21528831-21528631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
299-501
               

               
Cow position:
               
chr18:33492529-33492342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
299-505
               

               
Cow position:
               
chr18:23380309-23380109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
299-506
               

               
Cow position:
               
chr18:45573563-45573357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
299-525
               

               
Cow position:
               
chr18:20998229-20998458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
299-529
               

               
Cow position:
               
chr18:38601701-38601931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
299-529
               

               
Cow position:
               
chr18:50632262-50632488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
299-545
               

               
Cow position:
               
chr18:15809629-15809863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
235, 84
               

               
Conread position:
               
299-545
               

               
Cow position:
               
chr18:31556974-31557220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
299-550
               

               
Cow position:
               
chr18:52251672-52251921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 159
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr18:29264181-29264502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
299-664
               

               
Cow position:
               
chr18:16545277-16545633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
299-669
               

               
Cow position:
               
chr18:20173955-20174309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
299-672
               

               
Cow position:
               
chr18:7414850-7415208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr18:51712538-51712886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
300-450
               

               
Cow position:
               
chr18:37690334-37690178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
300-492
               

               
Cow position:
               
chr18:641134-641333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr18:2144751-2144549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
300-514
               

               
Cow position:
               
chr18:1858952-1859168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
300-545
               

               
Cow position:
               
chr18:32600235-32599992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
300-557
               

               
Cow position:
               
chr18:7963958-7963709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
300-561
               

               
Cow position:
               
chr18:23630434-23630683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
300-577
               

               
Cow position:
               
chr18:36450082-36449806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
300-626
               

               
Cow position:
               
chr18:3164332-3164652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
300-632
               

               
Cow position:
               
chr18:11907383-11907051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
300-670
               

               
Cow position:
               
chr18:5766587-5766235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
300-670
               

               
Cow position:
               
chr18:7109312-7108949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 156
               

               
Conread position:
               
300-689
               

               
Cow position:
               
chr18:55747872-55747489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
301-483
               

               
Cow position:
               
chr18:3709410-3709230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
301-486
               

               
Cow position:
               
chr18:18569157-18568990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr18:51395712-51395913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr18:39460396-39460191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr18:53092835-53093048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
301-520
               

               
Cow position:
               
chr18:37187811-37188034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
301-541
               

               
Cow position:
               
chr18:16659247-16659489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 158
               

               
Conread position:
               
301-598
               

               
Cow position:
               
chr18:43796777-43797064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr18:6881177-6881529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr18:7956329-7955964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr18:16227742-16227384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 157
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr18:42479400-42479769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
302-490
               

               
Cow position:
               
chr18:35950224-35950028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
302-511
               

               
Cow position:
               
chr18:28322831-28322629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
302-513
               

               
Cow position:
               
chr18:28189555-28189753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
129, 84
               

               
Conread position:
               
302-517
               

               
Cow position:
               
chr18:47872210-47872007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
302-529
               

               
Cow position:
               
chr18:2773208-2773438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
302-529
               

               
Cow position:
               
chr18:27079046-27078822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 156
               

               
Conread position:
               
302-564
               

               
Cow position:
               
chr18:10051925-10051667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
302-613
               

               
Cow position:
               
chr18:49038635-49038336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
302-640
               

               
Cow position:
               
chr18:50205618-50205945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
232, 94
               

               
Conread position:
               
302-657
               

               
Cow position:
               
chr18:23615693-23616045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
302-672
               

               
Cow position:
               
chr18:9010885-9010543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr18:18961653-18962018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr18:4718438-4718234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
303-542
               

               
Cow position:
               
chr18:38211340-38211103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
303-614
               

               
Cow position:
               
chr18:35664070-35663766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
304-674
               

               
Cow position:
               
chr18:54572111-54572474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr18:36296571-36296721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
305-492
               

               
Cow position:
               
chr18:35857753-35857933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
305-511
               

               
Cow position:
               
chr18:22789914-22790116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
305-516
               

               
Cow position:
               
chr18:39710292-39710076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
305-519
               

               
Cow position:
               
chr18:47801920-47802127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
211, 97
               

               
Conread position:
               
305-535
               

               
Cow position:
               
chr18:42427792-42427568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
305-536
               

               
Cow position:
               
chr18:14172037-14172260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
305-545
               

               
Cow position:
               
chr18:50359501-50359271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
305-579
               

               
Cow position:
               
chr18:20317885-20318135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
305-583
               

               
Cow position:
               
chr18:5078611-5078871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
305-592
               

               
Cow position:
               
chr18:20309270-20308981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
305-614
               

               
Cow position:
               
chr18:40759397-40759080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
305-630
               

               
Cow position:
               
chr18:36768643-36768947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
305-664
               

               
Cow position:
               
chr18:11867517-11867169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
305-668
               

               
Cow position:
               
chr18:32873774-32873418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
305-673
               

               
Cow position:
               
chr18:56181279-56181639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr18:23446883-23447263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 152
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr18:28101805-28101450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr18:50382426-50382077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
306-487
               

               
Cow position:
               
chr18:9596352-9596179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr18:52387043-52387236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
306-559
               

               
Cow position:
               
chr18:14225563-14225317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
227, 41
               

               
Conread position:
               
306-579
               

               
Cow position:
               
chr18:49015291-49015034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
306-673
               

               
Cow position:
               
chr18:16313551-16313203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
306-681
               

               
Cow position:
               
chr18:28930466-28930819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
366, 87
               

               
Conread position:
               
307-502
               

               
Cow position:
               
chr18:23898586-23898399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
307-545
               

               
Cow position:
               
chr18:40047330-40047558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
307-674
               

               
Cow position:
               
chr18:346321-346683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
308-516
               

               
Cow position:
               
chr18:30673266-30673460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
308-545
               

               
Cow position:
               
chr18:24719482-24719253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
308-667
               

               
Cow position:
               
chr18:56155689-56155327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
309-486
               

               
Cow position:
               
chr18:9818935-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
310-495
               

               
Cow position:
               
chr18:35235849-35236045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
310-511
               

               
Cow position:
               
chr18:4489729-4489936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
310-515
               

               
Cow position:
               
chr18:33757185-33756989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
310-520
               

               
Cow position:
               
chr18:26873587-26873388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
310-578
               

               
Cow position:
               
chr18:21782856-21782602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
310-665
               

               
Cow position:
               
chr18:50974117-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
310-703
               

               
Cow position:
               
chr18:23652942-23653343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
311-475
               

               
Cow position:
               
chr18:51655012-51655170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
312-513
               

               
Cow position:
               
chr18:35795051-35795252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
312-603
               

               
Cow position:
               
chr18:35534981-35535266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
312-651
               

               
Cow position:
               
chr18:51643200-51643528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr18:14586310-14586653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 73
               

               
Conread position:
               
313-478
               

               
Cow position:
               
chr18:3066504-3066349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr18:5189523-5189874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
314-544
               

               
Cow position:
               
chr18:51383231-51383454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
314-631
               

               
Cow position:
               
chr18:10214024-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
314-654
               

               
Cow position:
               
chr18:4555997-4556330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 146
               

               
Conread position:
               
314-673
               

               
Cow position:
               
chr18:12023472-12023815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
315-447
               

               
Cow position:
               
chr18:1735432-1735568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr18:3412530-3412376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr18:17195180-17195361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr18:22905789-22905976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr18:49280897-49281081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr18:46985401-46985592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
76, 146
               

               
Conread position:
               
315-506
               

               
Cow position:
               
chr18:4530721-4530536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
315-510
               

               
Cow position:
               
chr18:38363642-38363446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
315-510
               

               
Cow position:
               
chr18:43472370-43472174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr18:30295443-30295653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr18:45622636-45622835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr18:52383073-52382873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr18:8208257-8208457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr18:45899061-45898860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr18:34490447-34490247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
315-520
               

               
Cow position:
               
chr18:50004540-50004739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
315-521
               

               
Cow position:
               
chr18:9895831-9896032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
315-521
               

               
Cow position:
               
chr18:44044174-44044377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr18:50567070-50566862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-535
               

               
Cow position:
               
chr18:45558309-45558095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 70
               

               
Conread position:
               
315-542
               

               
Cow position:
               
chr18:25107114-25106886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 122
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr18:38937986-38937762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr18:44909218-44908993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
315-552
               

               
Cow position:
               
chr18:135494-135721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
315-589
               

               
Cow position:
               
chr18:10065353-10065630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 228
               

               
Conread position:
               
315-594
               

               
Cow position:
               
chr18:19765352-19765074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
216, 135
               

               
Conread position:
               
315-599
               

               
Cow position:
               
chr18:47392575-47392289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-603
               

               
Cow position:
               
chr18:12584678-12584959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
315-622
               

               
Cow position:
               
chr18:37303320-37303010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
315-643
               

               
Cow position:
               
chr18:10891677-10891360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
315-654
               

               
Cow position:
               
chr18:19641140-19640818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
315-665
               

               
Cow position:
               
chr18:52459688-52460037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
315-668
               

               
Cow position:
               
chr18:18918797-18919134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr18:3180576-3180242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr18:43555347-43555703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr18:55553139-55552790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 146
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:1144026-1144371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 27
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:1399186-1399533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:2591994-2592350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:3212046-3211690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 140
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:6275975-6275639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
67, 108
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:9029779-9029441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:11691240-11691589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:16043983-16044333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:20270845-20271201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:35453095-35452752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:37023370-37023734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:38985857-38985510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
178, 70
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr18:46276133-46276490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
316-598
               

               
Cow position:
               
chr18:23169745-23169465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
316-665
               

               
Cow position:
               
chr18:7134446-7134114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
318-509
               

               
Cow position:
               
chr18:29798120-29798300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
318-545
               

               
Cow position:
               
chr18:47693217-47693006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
318-562
               

               
Cow position:
               
chr18:5647971-5647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
318-621
               

               
Cow position:
               
chr18:22055697-22056013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
318-670
               

               
Cow position:
               
chr18:51757257-51756915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
318-674
               

               
Cow position:
               
chr18:3209882-3209532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
220, 104
               

               
Conread position:
               
319-516
               

               
Cow position:
               
chr18:19809521-19809715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
319-519
               

               
Cow position:
               
chr18:47868758-47868574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
319-520
               

               
Cow position:
               
chr18:4851323-4851516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
319-639
               

               
Cow position:
               
chr18:9846257-9846548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
319-642
               

               
Cow position:
               
chr18:33159105-33158802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
319-668
               

               
Cow position:
               
chr18:5072255-5072588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
219, 63
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr18:55499232-55498884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
319-671
               

               
Cow position:
               
chr18:9366084-9365738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:3158421-3158784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:9974168-9974505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:10905009-10904668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:10977053-10977388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:12059156-12058835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:30341020-30341357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:32883454-32883125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:39662943-39662597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr18:46048916-46048580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
320-535
               

               
Cow position:
               
chr18:25757153-25757363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
320-536
               

               
Cow position:
               
chr18:4649713-4649509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
320-666
               

               
Cow position:
               
chr18:19193211-19193539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
320-674
               

               
Cow position:
               
chr18:19143343-19143697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
321-535
               

               
Cow position:
               
chr18:47125252-47125452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
321-565
               

               
Cow position:
               
chr18:54513278-54513031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
321-608
               

               
Cow position:
               
chr18:41854429-41854710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
321-663
               

               
Cow position:
               
chr18:30586076-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
324-665
               

               
Cow position:
               
chr18:1392412-1392739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
326-669
               

               
Cow position:
               
chr18:42747753-42747417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
327-489
               

               
Cow position:
               
chr18:44548592-44548753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
327-555
               

               
Cow position:
               
chr18:43014716-43014930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
327-567
               

               
Cow position:
               
chr18:22516382-22516617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
327-610
               

               
Cow position:
               
chr18:29474892-29474618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
327-633
               

               
Cow position:
               
chr18:17368423-17368715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
327-643
               

               
Cow position:
               
chr18:42292908-42293206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
327-663
               

               
Cow position:
               
chr18:8170937-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr18:9066854-9066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
327-671
               

               
Cow position:
               
chr18:45104275-45104619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr18:26999043-26998687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr18:24022766-24022598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
330-504
               

               
Cow position:
               
chr18:48000677-48000852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
330-506
               

               
Cow position:
               
chr18:26586461-26586637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 127
               

               
Conread position:
               
330-616
               

               
Cow position:
               
chr18:2146441-2146715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
208, 48
               

               
Conread position:
               
330-668
               

               
Cow position:
               
chr18:55788842-55789165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr18:5578446-5578125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr18:37381940-37382275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 126
               

               
Conread position:
               
331-598
               

               
Cow position:
               
chr18:4757884-4758150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
331-674
               

               
Cow position:
               
chr18:39001664-39001984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
332-654
               

               
Cow position:
               
chr18:35874227-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr18:31727500-31727656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
336-507
               

               
Cow position:
               
chr18:43125222-43125062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr18:48112821-48113007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
336-538
               

               
Cow position:
               
chr18:49655826-49655630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
336-544
               

               
Cow position:
               
chr18:19296020-19295827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
336-597
               

               
Cow position:
               
chr18:53642605-53642862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
336-598
               

               
Cow position:
               
chr18:24759514-24759766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
336-670
               

               
Cow position:
               
chr18:11184084-11183768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
336-670
               

               
Cow position:
               
chr18:22143386-22143713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
221, 43
               

               
Conread position:
               
336-672
               

               
Cow position:
               
chr18:10322941-10322625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr18:29356488-29356808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
338-603
               

               
Cow position:
               
chr18:49267842-49268105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
338-654
               

               
Cow position:
               
chr18:24266260-24266574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr18:42454876-42455206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
339-668
               

               
Cow position:
               
chr18:4331094-4330779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
340-552
               

               
Cow position:
               
chr18:7481292-7481082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
340-598
               

               
Cow position:
               
chr18:20175053-20175302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
342-546
               

               
Cow position:
               
chr18:19628863-19629071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
342-665
               

               
Cow position:
               
chr18:51675945-51676268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
343-671
               

               
Cow position:
               
chr18:23821691-23821995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
344-627
               

               
Cow position:
               
chr18:55140419-55140698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
345-531
               

               
Cow position:
               
chr18:19158013-19157827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
345-536
               

               
Cow position:
               
chr18:51192609-51192793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
345-580
               

               
Cow position:
               
chr18:52647505-52647739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
345-665
               

               
Cow position:
               
chr18:33896275-33896600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr18:21195207-21195519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr18:28657778-28658091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
320, 110
               

               
Conread position:
               
346-664
               

               
Cow position:
               
chr18:33300024-33299731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
347-536
               

               
Cow position:
               
chr18:47565951-47565774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
347-545
               

               
Cow position:
               
chr18:47920883-47920680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
347-593
               

               
Cow position:
               
chr18:2774002-2774241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
347-674
               

               
Cow position:
               
chr18:47512133-47511817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
287, 48
               

               
Conread position:
               
348-670
               

               
Cow position:
               
chr18:8300158-8299836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
349-614
               

               
Cow position:
               
chr18:35367070-35367312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr18:11754264-11754072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
351-544
               

               
Cow position:
               
chr18:46647033-46647216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
351-584
               

               
Cow position:
               
chr18:48962069-48961837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
352-513
               

               
Cow position:
               
chr18:3518393-3518238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
352-606
               

               
Cow position:
               
chr18:24508095-24508355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
352-654
               

               
Cow position:
               
chr18:11377488-11377207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
352-674
               

               
Cow position:
               
chr18:858954-858628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
355-674
               

               
Cow position:
               
chr18:3386986-3387304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
357-665
               

               
Cow position:
               
chr18:51655924-51656221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr18:52693575-52693306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
206, 48
               

               
Conread position:
               
360-674
               

               
Cow position:
               
chr18:4626012-4625718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
364-578
               

               
Cow position:
               
chr18:44027958-44028158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
365-667
               

               
Cow position:
               
chr18:55806522-55806808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
368-545
               

               
Cow position:
               
chr18:24342954-24342782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
376-674
               

               
Cow position:
               
chr18:21192307-21192598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
376-674
               

               
Cow position:
               
chr18:39434928-39434646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
380-674
               

               
Cow position:
               
chr18:22214588-22214300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
381-609
               

               
Cow position:
               
chr18:4872160-4871952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr18:51392546-51392817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr18:19273001-19273275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr18:47835921-47835645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
382-545
               

               
Cow position:
               
chr18:24529776-24529929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
382-610
               

               
Cow position:
               
chr18:19883629-19883406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
382-669
               

               
Cow position:
               
chr18:27109197-27109473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
382-673
               

               
Cow position:
               
chr18:19896355-19896636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr18:7359841-7359558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 70
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr18:7952735-7952467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr18:16997350-16997065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
236, 70
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr18:52634975-52635266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
383-674
               

               
Cow position:
               
chr18:56159556-56159279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
384-533
               

               
Cow position:
               
chr18:4757478-4757620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
384-577
               

               
Cow position:
               
chr18:4624056-4624237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
384-622
               

               
Cow position:
               
chr18:22274729-22274970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
384-674
               

               
Cow position:
               
chr18:33008160-33007879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
384-674
               

               
Cow position:
               
chr18:48828681-48828963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
386-671
               

               
Cow position:
               
chr18:17005353-17005076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
386-671
               

               
Cow position:
               
chr18:21740722-21740988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
387-664
               

               
Cow position:
               
chr18:33157906-33157647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
387-674
               

               
Cow position:
               
chr18:11322687-11322415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
392-674
               

               
Cow position:
               
chr18:36746173-36746436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
393-545
               

               
Cow position:
               
chr18:2549218-2549363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
393-674
               

               
Cow position:
               
chr18:6609766-6610041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
394-633
               

               
Cow position:
               
chr18:47966842-47967069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
394-671
               

               
Cow position:
               
chr18:39875176-39875437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
395-640
               

               
Cow position:
               
chr18:52855138-52854898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
395-670
               

               
Cow position:
               
chr18:36459014-36458754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
395-674
               

               
Cow position:
               
chr18:10656522-10656264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
401-676
               

               
Cow position:
               
chr18:18369285-18369546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
402-669
               

               
Cow position:
               
chr18:4666141-4666387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
406-674
               

               
Cow position:
               
chr18:21102704-21102955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
407-674
               

               
Cow position:
               
chr18:23766338-23766594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
413-672
               

               
Cow position:
               
chr18:56166046-56165809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
413-674
               

               
Cow position:
               
chr18:4182123-4182369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
414-674
               

               
Cow position:
               
chr18:16686271-16686518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr18:13360116-13359884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
418-621
               

               
Cow position:
               
chr18:49659823-49660006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
418-670
               

               
Cow position:
               
chr18:29796368-29796602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
418-670
               

               
Cow position:
               
chr18:38344866-38344628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
426-670
               

               
Cow position:
               
chr18:25984514-25984747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
434-638
               

               
Cow position:
               
chr18:10117551-10117354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
457-638
               

               
Cow position:
               
chr18:43065556-43065379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
457-640
               

               
Cow position:
               
chr18:4952184-4952362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
457-668
               

               
Cow position:
               
chr18:28768392-28768184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
457-669
               

               
Cow position:
               
chr18:22411585-22411792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
457-673
               

               
Cow position:
               
chr18:35537210-35537415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr18:7947416-7947204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr18:14815322-14815519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr18:47812496-47812288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
459-672
               

               
Cow position:
               
chr18:36296989-36297212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
461-668
               

               
Cow position:
               
chr18:42966885-42966681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 33
               

               
Conread position:
               
463-674
               

               
Cow position:
               
chr18:14048729-14048533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
465-672
               

               
Cow position:
               
chr18:267801-267995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
466-666
               

               
Cow position:
               
chr18:32121051-32121241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
168, 7
               

               
Conread position:
               
467-674
               

               
Cow position:
               
chr18:4368761-4368957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
470-674
               

               
Cow position:
               
chr18:219349-219151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
470-674
               

               
Cow position:
               
chr18:36098225-36098020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
68, 178
               

               
Conread position:
               
471-674
               

               
Cow position:
               
chr18:21205381-21205181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
479-674
               

               
Cow position:
               
chr18:4648743-4648925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
480-670
               

               
Cow position:
               
chr18:35636343-35636528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
485-673
               

               
Cow position:
               
chr18:55397308-55397122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
490-670
               

               
Cow position:
               
chr18:10861436-10861615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
155, 48
               

               
Conread position:
               
494-633
               

               
Cow position:
               
chr18:30295659-30295797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
494-665
               

               
Cow position:
               
chr18:24022377-24022200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
494-674
               

               
Cow position:
               
chr18:33606620-33606447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
495-674
               

               
Cow position:
               
chr18:3709024-3708840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
497-670
               

               
Cow position:
               
chr18:15340458-15340624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
497-674
               

               
Cow position:
               
chr18:11680710-11680543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
497-674
               

               
Cow position:
               
chr18:35886871-35886697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
500-663
               

               
Cow position:
               
chr18:35582114-35582271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
500-663
               

               
Cow position:
               
chr18:45185739-45185575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
504-674
               

               
Cow position:
               
chr18:4316291-4316129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
507-674
               

               
Cow position:
               
chr18:47314304-47314471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
509-674
               

               
Cow position:
               
chr18:26586683-26586841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
528-674
               

               
Cow position:
               
chr18:18815712-18815858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
549-670
               

               
Cow position:
               
chr18:26286849-26286734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
550-674
               

               
Cow position:
               
chr18:29188951-29188828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 108
               
Show alignments to all cow chromosomes.