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Cow genome map

           
Conread name:
           
Lng1-LNG010084D02
        

               
Conread position:
               
278-545
               

               
Cow position:
               
chr27:30483584-30483314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
279-503
               

               
Cow position:
               
chr27:6679661-6679431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
281-514
               

               
Cow position:
               
chr27:10581255-10581483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 174
               

               
Conread position:
               
282-674
               

               
Cow position:
               
chr27:21978420-21978031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
282-674
               

               
Cow position:
               
chr27:30374856-30374467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
284-674
               

               
Cow position:
               
chr27:19387751-19388119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
285-674
               

               
Cow position:
               
chr27:17472539-17472918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
286-474
               

               
Cow position:
               
chr27:16505178-16504996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
287-450
               

               
Cow position:
               
chr27:1779114-1778960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
287-500
               

               
Cow position:
               
chr27:672392-672607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr27:2930862-2930491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
94, 172
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr27:15865957-15866329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
287-674
               

               
Cow position:
               
chr27:20553049-20552655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
288-486
               

               
Cow position:
               
chr27:28476377-28476187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
288-491
               

               
Cow position:
               
chr27:23232643-23232847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
288-670
               

               
Cow position:
               
chr27:27632861-27632509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
289-477
               

               
Cow position:
               
chr27:19074291-19074105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
290-450
               

               
Cow position:
               
chr27:23527768-23527606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
290-560
               

               
Cow position:
               
chr27:27055030-27055285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
260, 19
               

               
Conread position:
               
290-604
               

               
Cow position:
               
chr27:13869353-13869664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
291-470
               

               
Cow position:
               
chr27:21054188-21054372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
291-517
               

               
Cow position:
               
chr27:19576584-19576366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
291-545
               

               
Cow position:
               
chr27:26121490-26121743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
291-617
               

               
Cow position:
               
chr27:23859892-23860222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 152
               

               
Conread position:
               
291-674
               

               
Cow position:
               
chr27:15669042-15668665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 171
               

               
Conread position:
               
292-398
               

               
Cow position:
               
chr27:8264375-8264269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr27:26236068-26236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
292-622
               

               
Cow position:
               
chr27:8062618-8062296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr27:29458067-29458289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
293-506
               

               
Cow position:
               
chr27:21677698-21677478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
293-513
               

               
Cow position:
               
chr27:20327233-20327453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
293-545
               

               
Cow position:
               
chr27:19607925-19607675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
293-555
               

               
Cow position:
               
chr27:24303679-24303940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
293-595
               

               
Cow position:
               
chr27:6290211-6290503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
293-621
               

               
Cow position:
               
chr27:31151117-31151434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
293-672
               

               
Cow position:
               
chr27:26509423-26509057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
294-584
               

               
Cow position:
               
chr27:25151822-25152102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
294-585
               

               
Cow position:
               
chr27:11561516-11561797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
294-665
               

               
Cow position:
               
chr27:16103547-16103903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
93, 148
               

               
Conread position:
               
294-671
               

               
Cow position:
               
chr27:29504896-29504545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
295-450
               

               
Cow position:
               
chr27:27012432-27012594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
295-453
               

               
Cow position:
               
chr27:22614591-22614759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
295-471
               

               
Cow position:
               
chr27:26154060-26154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
295-480
               

               
Cow position:
               
chr27:22583479-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
295-481
               

               
Cow position:
               
chr27:1292481-1292668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
295-486
               

               
Cow position:
               
chr27:29246407-29246221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
295-499
               

               
Cow position:
               
chr27:18491305-18491495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
295-520
               

               
Cow position:
               
chr27:19293078-19292851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
295-531
               

               
Cow position:
               
chr27:26481460-26481224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
295-535
               

               
Cow position:
               
chr27:10404380-10404142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
295-536
               

               
Cow position:
               
chr27:10323580-10323813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
295-545
               

               
Cow position:
               
chr27:29991722-29991462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
295-577
               

               
Cow position:
               
chr27:26437383-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 159
               

               
Conread position:
               
295-603
               

               
Cow position:
               
chr27:29613752-29613449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
295-622
               

               
Cow position:
               
chr27:18507381-18507700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
295-629
               

               
Cow position:
               
chr27:23929716-23930041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
195, 23
               

               
Conread position:
               
295-638
               

               
Cow position:
               
chr27:6924819-6925163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
295-663
               

               
Cow position:
               
chr27:15315261-15315603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 23
               

               
Conread position:
               
295-673
               

               
Cow position:
               
chr27:27438771-27438400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr27:11133823-11134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
296-588
               

               
Cow position:
               
chr27:14817968-14818258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
296-604
               

               
Cow position:
               
chr27:13940812-13940519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
296-668
               

               
Cow position:
               
chr27:28922159-28921799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 164
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr27:13639247-13638887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr27:27020355-27019997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
297-477
               

               
Cow position:
               
chr27:19991883-19992071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr27:1810349-1810144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
297-508
               

               
Cow position:
               
chr27:2949577-2949379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
297-508
               

               
Cow position:
               
chr27:11349022-11349224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr27:28015997-28015783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
297-515
               

               
Cow position:
               
chr27:18791774-18791554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
297-516
               

               
Cow position:
               
chr27:9504293-9504507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
297-516
               

               
Cow position:
               
chr27:21419445-21419235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
297-517
               

               
Cow position:
               
chr27:19741655-19741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
297-527
               

               
Cow position:
               
chr27:6162664-6162443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
297-530
               

               
Cow position:
               
chr27:12658612-12658377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
297-538
               

               
Cow position:
               
chr27:24007200-24007446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
297-554
               

               
Cow position:
               
chr27:27740554-27740299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
297-555
               

               
Cow position:
               
chr27:26245807-26245552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
297-564
               

               
Cow position:
               
chr27:21385646-21385394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
297-566
               

               
Cow position:
               
chr27:9338245-9337971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
297-571
               

               
Cow position:
               
chr27:17933661-17933936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 162
               

               
Conread position:
               
297-595
               

               
Cow position:
               
chr27:13255055-13254772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
297-643
               

               
Cow position:
               
chr27:19500497-19500155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
297-643
               

               
Cow position:
               
chr27:20514564-20514899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
297-665
               

               
Cow position:
               
chr27:25428169-25427803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
297-668
               

               
Cow position:
               
chr27:20828966-20828613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr27:6550196-6550557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr27:19669066-19668693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 128
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr27:1353320-1353695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr27:19546778-19546401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
297-675
               

               
Cow position:
               
chr27:11480900-11480523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
298-619
               

               
Cow position:
               
chr27:27558766-27558444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
298-621
               

               
Cow position:
               
chr27:1190739-1190419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
298-670
               

               
Cow position:
               
chr27:11435587-11435220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr27:12515930-12516300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 161
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr27:15867129-15867503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 158
               

               
Conread position:
               
299-442
               

               
Cow position:
               
chr27:20785861-20786011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
299-450
               

               
Cow position:
               
chr27:29399350-29399499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
299-469
               

               
Cow position:
               
chr27:21101553-21101381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
299-504
               

               
Cow position:
               
chr27:18987961-18988167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
299-511
               

               
Cow position:
               
chr27:20484475-20484681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
299-521
               

               
Cow position:
               
chr27:16246549-16246768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr27:11982907-11982635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
92, 159
               

               
Conread position:
               
299-627
               

               
Cow position:
               
chr27:20749261-20748944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 99
               

               
Conread position:
               
299-631
               

               
Cow position:
               
chr27:29593885-29593560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
299-671
               

               
Cow position:
               
chr27:27554939-27554580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr27:8168680-8168324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr27:31373231-31372874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 155
               

               
Conread position:
               
299-675
               

               
Cow position:
               
chr27:22035631-22035271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
300-513
               

               
Cow position:
               
chr27:28253975-28254191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 161
               

               
Conread position:
               
300-515
               

               
Cow position:
               
chr27:13181646-13181866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
300-541
               

               
Cow position:
               
chr27:6241450-6241211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
300-544
               

               
Cow position:
               
chr27:31386890-31386648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
300-584
               

               
Cow position:
               
chr27:15204494-15204210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 162
               

               
Conread position:
               
300-665
               

               
Cow position:
               
chr27:7935413-7935059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
300-668
               

               
Cow position:
               
chr27:2592279-2592648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 162
               

               
Conread position:
               
300-672
               

               
Cow position:
               
chr27:30914750-30915109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr27:13875476-13875836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr27:17397711-17397345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr27:30890043-30890392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
301-502
               

               
Cow position:
               
chr27:27450139-27449943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
301-504
               

               
Cow position:
               
chr27:20127554-20127353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
301-527
               

               
Cow position:
               
chr27:13204206-13204426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
301-603
               

               
Cow position:
               
chr27:5553215-5553510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr27:26226546-26226185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
301-674
               

               
Cow position:
               
chr27:30764773-30765143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 148
               

               
Conread position:
               
302-488
               

               
Cow position:
               
chr27:30444929-30444752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
302-495
               

               
Cow position:
               
chr27:17908513-17908324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
302-514
               

               
Cow position:
               
chr27:18688665-18688455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
302-544
               

               
Cow position:
               
chr27:7343685-7343446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
302-575
               

               
Cow position:
               
chr27:31210292-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
302-637
               

               
Cow position:
               
chr27:6541380-6541702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr27:17331232-17331604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr27:20045640-20045991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr27:24477170-24477518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr27:19779621-19779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr27:22497772-22497957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
303-668
               

               
Cow position:
               
chr27:29816886-29816524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
304-517
               

               
Cow position:
               
chr27:29614788-29614999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
304-579
               

               
Cow position:
               
chr27:12459036-12459300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
304-670
               

               
Cow position:
               
chr27:299629-299286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
304-673
               

               
Cow position:
               
chr27:28518041-28518394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
304-674
               

               
Cow position:
               
chr27:7649845-7649483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
304-674
               

               
Cow position:
               
chr27:16478576-16478236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
259, 39
               

               
Conread position:
               
305-415
               

               
Cow position:
               
chr27:15697332-15697442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
305-425
               

               
Cow position:
               
chr27:29056057-29056176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
305-476
               

               
Cow position:
               
chr27:19805950-19805780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
305-480
               

               
Cow position:
               
chr27:18873800-18873968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr27:1674548-1674374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr27:6330381-6330581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
305-511
               

               
Cow position:
               
chr27:29308090-29308294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
305-522
               

               
Cow position:
               
chr27:11323073-11323292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
305-524
               

               
Cow position:
               
chr27:19557143-19557348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
305-601
               

               
Cow position:
               
chr27:16249635-16249338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
305-630
               

               
Cow position:
               
chr27:27405322-27405003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
305-664
               

               
Cow position:
               
chr27:16275934-16275576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 250
               

               
Conread position:
               
305-670
               

               
Cow position:
               
chr27:10307558-10307197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 158
               

               
Conread position:
               
305-670
               

               
Cow position:
               
chr27:18543735-18544100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
305-670
               

               
Cow position:
               
chr27:28002057-28001709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
305-673
               

               
Cow position:
               
chr27:1637179-1636839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
306-520
               

               
Cow position:
               
chr27:24223703-24223912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
306-596
               

               
Cow position:
               
chr27:19932814-19933097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
306-665
               

               
Cow position:
               
chr27:18558107-18558456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr27:14670632-14670279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 147
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr27:16965323-16965693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
307-504
               

               
Cow position:
               
chr27:20048386-20048578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
307-511
               

               
Cow position:
               
chr27:23760229-23760024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
185, 160
               

               
Conread position:
               
307-514
               

               
Cow position:
               
chr27:12187375-12187167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 151
               

               
Conread position:
               
307-529
               

               
Cow position:
               
chr27:19681698-19681921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
307-545
               

               
Cow position:
               
chr27:30455743-30455977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
307-613
               

               
Cow position:
               
chr27:20869934-20869643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
307-670
               

               
Cow position:
               
chr27:30261146-30260791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
308-528
               

               
Cow position:
               
chr27:15926547-15926764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
308-529
               

               
Cow position:
               
chr27:15003229-15003009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
310-450
               

               
Cow position:
               
chr27:26467809-26467663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
310-484
               

               
Cow position:
               
chr27:178615-178787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
310-490
               

               
Cow position:
               
chr27:26983915-26984092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
86, 101
               

               
Conread position:
               
310-495
               

               
Cow position:
               
chr27:9956682-9956496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
310-499
               

               
Cow position:
               
chr27:11454422-11454230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
310-661
               

               
Cow position:
               
chr27:18646397-18646053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 103
               

               
Conread position:
               
310-670
               

               
Cow position:
               
chr27:20637305-20636965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
310-671
               

               
Cow position:
               
chr27:24331467-24331827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr27:28932050-28931686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
312-420
               

               
Cow position:
               
chr27:14675418-14675310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
312-480
               

               
Cow position:
               
chr27:2036480-2036640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
312-503
               

               
Cow position:
               
chr27:31157564-31157755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
312-595
               

               
Cow position:
               
chr27:26794030-26793757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
312-668
               

               
Cow position:
               
chr27:4390503-4390158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr27:7615315-7614983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
312, 67
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr27:16786585-16786928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
313-545
               

               
Cow position:
               
chr27:23147919-23148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
313-671
               

               
Cow position:
               
chr27:23594074-23594418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr27:7959078-7958728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
314-632
               

               
Cow position:
               
chr27:591012-590699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
314-637
               

               
Cow position:
               
chr27:4944750-4944445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
202, 69
               

               
Conread position:
               
314-665
               

               
Cow position:
               
chr27:15453969-15454307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
314-671
               

               
Cow position:
               
chr27:22171058-22171402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
314-674
               

               
Cow position:
               
chr27:11151426-11151781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
315-488
               

               
Cow position:
               
chr27:11145639-11145807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
315-492
               

               
Cow position:
               
chr27:12432401-12432223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr27:20266469-20266286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr27:21201947-21202132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr27:26980208-26980023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr27:31515796-31515608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
315-502
               

               
Cow position:
               
chr27:11208800-11208612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr27:7412150-7412342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr27:11507507-11507314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
315-513
               

               
Cow position:
               
chr27:26400960-26400768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr27:15237568-15237768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr27:5614343-5614555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr27:20719042-20719257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
315-564
               

               
Cow position:
               
chr27:9977443-9977692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
315-577
               

               
Cow position:
               
chr27:5545337-5545595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
315-584
               

               
Cow position:
               
chr27:11708075-11707812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
315-593
               

               
Cow position:
               
chr27:10582128-10582401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
315-593
               

               
Cow position:
               
chr27:12564671-12564394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
315-605
               

               
Cow position:
               
chr27:23507407-23507691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
315-609
               

               
Cow position:
               
chr27:10658935-10659229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
315-609
               

               
Cow position:
               
chr27:26852825-26852547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
315-616
               

               
Cow position:
               
chr27:28896635-28896932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
315-622
               

               
Cow position:
               
chr27:7346427-7346722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
315-632
               

               
Cow position:
               
chr27:22225812-22225527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
315-632
               

               
Cow position:
               
chr27:23452220-23452529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
315-668
               

               
Cow position:
               
chr27:20354357-20354683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
315-668
               

               
Cow position:
               
chr27:22513924-22513577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr27:25809759-25809414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr27:30814174-30814515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr27:426727-427071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 140
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr27:27389270-27388922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr27:29831951-29831585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr27:6787709-6788059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
315-672
               

               
Cow position:
               
chr27:22439894-22440240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:6499815-6500166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:10979617-10979965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:15870916-15871268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:18031313-18030955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
195, 110
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:20078622-20078972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:24228047-24227688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr27:30868994-30868637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
318-511
               

               
Cow position:
               
chr27:22792599-22792783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
318-527
               

               
Cow position:
               
chr27:23527075-23527280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
318-551
               

               
Cow position:
               
chr27:18435370-18435142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr27:26173258-26173489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
318-616
               

               
Cow position:
               
chr27:2901505-2901213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
318-632
               

               
Cow position:
               
chr27:26112158-26111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
318-674
               

               
Cow position:
               
chr27:27460818-27460470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
319-492
               

               
Cow position:
               
chr27:21951219-21951046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
319-515
               

               
Cow position:
               
chr27:5539931-5539740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
319-515
               

               
Cow position:
               
chr27:26565556-26565743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
319-520
               

               
Cow position:
               
chr27:17102661-17102856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
319-522
               

               
Cow position:
               
chr27:20548571-20548773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
319-523
               

               
Cow position:
               
chr27:31248845-31248650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr27:16512406-16512195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr27:29319166-29319387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
319-555
               

               
Cow position:
               
chr27:8790981-8790747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
319-579
               

               
Cow position:
               
chr27:12425049-12425304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
319-604
               

               
Cow position:
               
chr27:212712-213004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr27:21990904-21991257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr27:28018084-28018436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 232
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr27:3306547-3306874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
281, 60
               

               
Conread position:
               
319-673
               

               
Cow position:
               
chr27:12596543-12596869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr27:22220311-22220655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr27:28190430-28190112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr27:28206565-28206899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
320-520
               

               
Cow position:
               
chr27:4414053-4413859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
171, 8
               

               
Conread position:
               
320-613
               

               
Cow position:
               
chr27:15865372-15865660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 132
               

               
Conread position:
               
320-670
               

               
Cow position:
               
chr27:20283406-20283743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
172, 63
               

               
Conread position:
               
320-674
               

               
Cow position:
               
chr27:10992136-10992459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
209, 49
               

               
Conread position:
               
321-539
               

               
Cow position:
               
chr27:27648552-27648338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
321-550
               

               
Cow position:
               
chr27:26883496-26883265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
321-561
               

               
Cow position:
               
chr27:27058642-27058407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr27:22602938-22603276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr27:26428365-26428027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr27:29431239-29431562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
322-533
               

               
Cow position:
               
chr27:29160220-29160013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
322-674
               

               
Cow position:
               
chr27:27442396-27442065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
226, 80
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr27:22489037-22489342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
323-674
               

               
Cow position:
               
chr27:4858854-4858541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
324-506
               

               
Cow position:
               
chr27:26909822-26909645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
324-512
               

               
Cow position:
               
chr27:232317-232506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
65, 134
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr27:1184407-1184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr27:16705019-16705351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
324-674
               

               
Cow position:
               
chr27:8630107-8629768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
324-674
               

               
Cow position:
               
chr27:15409259-15408938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
203, 60
               

               
Conread position:
               
326-586
               

               
Cow position:
               
chr27:11994099-11993842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
326-673
               

               
Cow position:
               
chr27:11159783-11160100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
326-673
               

               
Cow position:
               
chr27:19660696-19661044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
327-490
               

               
Cow position:
               
chr27:26175897-26175738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
327-492
               

               
Cow position:
               
chr27:23177543-23177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
327-622
               

               
Cow position:
               
chr27:23560260-23559973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
327-665
               

               
Cow position:
               
chr27:22560057-22559725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
327-665
               

               
Cow position:
               
chr27:23735738-23736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
327-671
               

               
Cow position:
               
chr27:23554560-23554222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr27:26314353-26314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
330-667
               

               
Cow position:
               
chr27:26188599-26188919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
330-671
               

               
Cow position:
               
chr27:19685938-19685609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
330-672
               

               
Cow position:
               
chr27:26999651-26999316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr27:27695003-27694667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 131
               

               
Conread position:
               
331-515
               

               
Cow position:
               
chr27:24755764-24755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
331-544
               

               
Cow position:
               
chr27:6319696-6319901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
331-668
               

               
Cow position:
               
chr27:23890706-23891040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
331-671
               

               
Cow position:
               
chr27:23128238-23128562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
334-674
               

               
Cow position:
               
chr27:11815972-11815654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
336-527
               

               
Cow position:
               
chr27:19452777-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
336-577
               

               
Cow position:
               
chr27:22553100-22552869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 76
               

               
Conread position:
               
336-612
               

               
Cow position:
               
chr27:2644320-2644043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
336-662
               

               
Cow position:
               
chr27:21393715-21393408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
198, 49
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr27:13318199-13317853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
337-534
               

               
Cow position:
               
chr27:24709333-24709527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr27:15332509-15332316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
337-576
               

               
Cow position:
               
chr27:28478363-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
209, 52
               

               
Conread position:
               
337-674
               

               
Cow position:
               
chr27:29380640-29380963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
338-487
               

               
Cow position:
               
chr27:23930857-23930710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
338-499
               

               
Cow position:
               
chr27:23060336-23060174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
338-524
               

               
Cow position:
               
chr27:4370730-4370546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 112
               

               
Conread position:
               
338-669
               

               
Cow position:
               
chr27:22735814-22735502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr27:18739154-18739493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
338-674
               

               
Cow position:
               
chr27:22427055-22426723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
339-674
               

               
Cow position:
               
chr27:21408785-21408451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
340-579
               

               
Cow position:
               
chr27:16231158-16230921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
340-598
               

               
Cow position:
               
chr27:14303522-14303768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
342-535
               

               
Cow position:
               
chr27:24731254-24731064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
342-604
               

               
Cow position:
               
chr27:17646373-17646127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
342-670
               

               
Cow position:
               
chr27:15925126-15925445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
343-537
               

               
Cow position:
               
chr27:29603603-29603795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
343-627
               

               
Cow position:
               
chr27:24393778-24394062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
344-499
               

               
Cow position:
               
chr27:18912735-18912584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
344-674
               

               
Cow position:
               
chr27:11536321-11535995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
344-674
               

               
Cow position:
               
chr27:19896549-19896858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
345-489
               

               
Cow position:
               
chr27:31153771-31153628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
345-515
               

               
Cow position:
               
chr27:19485658-19485829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
345-584
               

               
Cow position:
               
chr27:2886048-2885812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
345-670
               

               
Cow position:
               
chr27:30582524-30582841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr27:13251811-13252111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
346-545
               

               
Cow position:
               
chr27:20501620-20501824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
346-665
               

               
Cow position:
               
chr27:24939683-24940006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
347-670
               

               
Cow position:
               
chr27:17995157-17994841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
347-674
               

               
Cow position:
               
chr27:1768833-1768522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
352-514
               

               
Cow position:
               
chr27:27747674-27747511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
352-529
               

               
Cow position:
               
chr27:14841393-14841215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
352-579
               

               
Cow position:
               
chr27:15825929-15825709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
352-624
               

               
Cow position:
               
chr27:20812709-20812970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
225, 20
               

               
Conread position:
               
352-674
               

               
Cow position:
               
chr27:26807763-26807458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
188, 10
               

               
Conread position:
               
353-674
               

               
Cow position:
               
chr27:23632395-23632703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
355-674
               

               
Cow position:
               
chr27:26920113-26919797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
360-674
               

               
Cow position:
               
chr27:22418962-22418663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
376-674
               

               
Cow position:
               
chr27:23545509-23545215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
381-577
               

               
Cow position:
               
chr27:1789312-1789123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
381-584
               

               
Cow position:
               
chr27:22423343-22423530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
381-599
               

               
Cow position:
               
chr27:18923004-18922795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 12
               

               
Conread position:
               
381-604
               

               
Cow position:
               
chr27:15343451-15343240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
381-616
               

               
Cow position:
               
chr27:23877018-23876789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
381-628
               

               
Cow position:
               
chr27:7974004-7974238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
381-633
               

               
Cow position:
               
chr27:20085383-20085633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
381-665
               

               
Cow position:
               
chr27:27270715-27270443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
381-666
               

               
Cow position:
               
chr27:31148588-31148858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr27:19717741-19718023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
381-670
               

               
Cow position:
               
chr27:27684286-27684019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
381-673
               

               
Cow position:
               
chr27:30988624-30988900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr27:15643001-15643277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr27:20795619-20795892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
170, 74
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr27:28467622-28467337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
275, 42
               

               
Conread position:
               
382-644
               

               
Cow position:
               
chr27:15215054-15215313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr27:28271323-28271041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
383-555
               

               
Cow position:
               
chr27:27673187-27673022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
383-674
               

               
Cow position:
               
chr27:30359235-30359509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
384-609
               

               
Cow position:
               
chr27:20803829-20803612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
384-636
               

               
Cow position:
               
chr27:20336931-20337184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 66
               

               
Conread position:
               
386-668
               

               
Cow position:
               
chr27:26413423-26413154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
386-674
               

               
Cow position:
               
chr27:27641179-27640890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
388-627
               

               
Cow position:
               
chr27:31017992-31017771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
392-674
               

               
Cow position:
               
chr27:21453257-21452968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
193, 60
               

               
Conread position:
               
393-669
               

               
Cow position:
               
chr27:8263500-8263235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
394-606
               

               
Cow position:
               
chr27:17918474-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
394-637
               

               
Cow position:
               
chr27:27038998-27038767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
394-674
               

               
Cow position:
               
chr27:27064600-27064338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
395-671
               

               
Cow position:
               
chr27:4386221-4385961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
398-622
               

               
Cow position:
               
chr27:30389454-30389237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
402-674
               

               
Cow position:
               
chr27:28245650-28245906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
406-671
               

               
Cow position:
               
chr27:30354493-30354241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
413-674
               

               
Cow position:
               
chr27:715359-715608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
444-621
               

               
Cow position:
               
chr27:21975937-21976106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
454-671
               

               
Cow position:
               
chr27:26135041-26135239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
457-626
               

               
Cow position:
               
chr27:4155893-4156064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
457-628
               

               
Cow position:
               
chr27:20056071-20055906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
457-643
               

               
Cow position:
               
chr27:6159877-6160063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
457-668
               

               
Cow position:
               
chr27:25379885-25380092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr27:1058780-1058578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr27:9169744-9169539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr27:12429304-12429508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
458-675
               

               
Cow position:
               
chr27:20247906-20247693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
459-669
               

               
Cow position:
               
chr27:21351122-21350919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 19
               

               
Conread position:
               
459-674
               

               
Cow position:
               
chr27:24999841-24999633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
459-674
               

               
Cow position:
               
chr27:27844103-27843891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
482-674
               

               
Cow position:
               
chr27:6350917-6350724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
489-665
               

               
Cow position:
               
chr27:7538148-7537977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
489-668
               

               
Cow position:
               
chr27:6522973-6523142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
489-674
               

               
Cow position:
               
chr27:21569911-21569738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
493-674
               

               
Cow position:
               
chr27:20570052-20570227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
494-674
               

               
Cow position:
               
chr27:29283474-29283303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
499-620
               

               
Cow position:
               
chr27:13802040-13802158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
499-670
               

               
Cow position:
               
chr27:10395320-10395157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
499-674
               

               
Cow position:
               
chr27:27259553-27259714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr27:22268441-22268606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
503-674
               

               
Cow position:
               
chr27:4011622-4011784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
507-665
               

               
Cow position:
               
chr27:26398311-26398163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               
Show alignments to all cow chromosomes.