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Cow genome map

           
Conread name:
           
Lng1-LNG010084D02
        

               
Conread position:
               
260-674
               

               
Cow position:
               
chr9:34286576-34286978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
273-667
               

               
Cow position:
               
chr9:4512264-4512658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
35, 195
               

               
Conread position:
               
276-536
               

               
Cow position:
               
chr9:12337685-12337951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 187
               

               
Conread position:
               
279-520
               

               
Cow position:
               
chr9:34034068-34034288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
280-674
               

               
Cow position:
               
chr9:40303343-40302951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
281-530
               

               
Cow position:
               
chr9:20451838-20451585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
282-495
               

               
Cow position:
               
chr9:34423414-34423630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
282-638
               

               
Cow position:
               
chr9:38624827-38624483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
283-674
               

               
Cow position:
               
chr9:50977461-50977068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 178
               

               
Conread position:
               
285-500
               

               
Cow position:
               
chr9:52649048-52648844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
285-517
               

               
Cow position:
               
chr9:55173839-55173605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
285-540
               

               
Cow position:
               
chr9:4181745-4181496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr9:5772874-5772661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
286-536
               

               
Cow position:
               
chr9:8992376-8992130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
286-536
               

               
Cow position:
               
chr9:12786677-12786424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
34, 174
               

               
Conread position:
               
286-613
               

               
Cow position:
               
chr9:33411769-33411455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
286-669
               

               
Cow position:
               
chr9:16811860-16811487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
286-674
               

               
Cow position:
               
chr9:9724079-9723706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
287-495
               

               
Cow position:
               
chr9:28315224-28315437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
14, 175
               

               
Conread position:
               
287-498
               

               
Cow position:
               
chr9:11448005-11447798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
287-505
               

               
Cow position:
               
chr9:17350490-17350282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
287-510
               

               
Cow position:
               
chr9:53632124-53631903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
287-667
               

               
Cow position:
               
chr9:26477015-26477387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
288-499
               

               
Cow position:
               
chr9:1403735-1403524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
288-516
               

               
Cow position:
               
chr9:49984245-49984012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
288-671
               

               
Cow position:
               
chr9:54681325-54681678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
288-674
               

               
Cow position:
               
chr9:28747714-28747347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
289-445
               

               
Cow position:
               
chr9:58756335-58756492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
289-450
               

               
Cow position:
               
chr9:50647873-50648035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr9:52257655-52257445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
289-631
               

               
Cow position:
               
chr9:1867280-1867589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr9:52153118-52153300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr9:34917372-34917168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
290-517
               

               
Cow position:
               
chr9:8537115-8537337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 5
               

               
Conread position:
               
290-628
               

               
Cow position:
               
chr9:34410590-34410259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
290-675
               

               
Cow position:
               
chr9:52619453-52619827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
291-495
               

               
Cow position:
               
chr9:9091309-9091097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 177
               

               
Conread position:
               
291-495
               

               
Cow position:
               
chr9:31346322-31346522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
291-561
               

               
Cow position:
               
chr9:47517000-47517269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
291-599
               

               
Cow position:
               
chr9:49863750-49863443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 168
               

               
Conread position:
               
291-668
               

               
Cow position:
               
chr9:13670443-13670804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
201, 13
               

               
Conread position:
               
291-674
               

               
Cow position:
               
chr9:15806118-15805747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
292-432
               

               
Cow position:
               
chr9:35905190-35905050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-515
               

               
Cow position:
               
chr9:29984268-29984492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 164
               

               
Conread position:
               
292-530
               

               
Cow position:
               
chr9:58132146-58131910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
292-584
               

               
Cow position:
               
chr9:6954447-6954154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 165
               

               
Conread position:
               
292-643
               

               
Cow position:
               
chr9:22318167-22318498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
292-674
               

               
Cow position:
               
chr9:20318767-20318400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
293-448
               

               
Cow position:
               
chr9:51609087-51609241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
293-495
               

               
Cow position:
               
chr9:34964928-34964735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
293-515
               

               
Cow position:
               
chr9:54940618-54940398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
293-534
               

               
Cow position:
               
chr9:39148890-39149126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
293-574
               

               
Cow position:
               
chr9:7611977-7611703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
245, 27
               

               
Conread position:
               
293-577
               

               
Cow position:
               
chr9:50382510-50382239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
260, 76
               

               
Conread position:
               
293-660
               

               
Cow position:
               
chr9:19034162-19034504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
293-670
               

               
Cow position:
               
chr9:5433455-5433812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 21
               

               
Conread position:
               
293-674
               

               
Cow position:
               
chr9:6338600-6338976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
293-674
               

               
Cow position:
               
chr9:19538910-19539271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
294-495
               

               
Cow position:
               
chr9:26557770-26557976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
294-505
               

               
Cow position:
               
chr9:8645076-8645285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
294-511
               

               
Cow position:
               
chr9:37951092-37950874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
294-622
               

               
Cow position:
               
chr9:13744124-13743802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr9:53258247-53257879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 133
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr9:58979213-58979575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
295-450
               

               
Cow position:
               
chr9:50779623-50779784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
295-476
               

               
Cow position:
               
chr9:60741371-60741195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
295-499
               

               
Cow position:
               
chr9:40221374-40221174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr9:35295506-35295717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
295-524
               

               
Cow position:
               
chr9:41644942-41644714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
295-530
               

               
Cow position:
               
chr9:36457804-36458044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
295-545
               

               
Cow position:
               
chr9:48016797-48017037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
295-593
               

               
Cow position:
               
chr9:52510926-52511216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
295-622
               

               
Cow position:
               
chr9:37934431-37934106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
295-669
               

               
Cow position:
               
chr9:41416140-41416527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:9573130-9573510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:12280785-12281147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:28452364-28451980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:31625940-31626323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
5, 227
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:33219142-33218774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
295-674
               

               
Cow position:
               
chr9:44709642-44710003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
296-480
               

               
Cow position:
               
chr9:40586881-40587053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
296-487
               

               
Cow position:
               
chr9:34760553-34760364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
296-492
               

               
Cow position:
               
chr9:17027008-17027202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
296-495
               

               
Cow position:
               
chr9:8467870-8468065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
296-520
               

               
Cow position:
               
chr9:8613402-8613178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
296-622
               

               
Cow position:
               
chr9:48730239-48730558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 162
               

               
Conread position:
               
296-645
               

               
Cow position:
               
chr9:20815677-20816014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
296-664
               

               
Cow position:
               
chr9:12910589-12910234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 158
               

               
Conread position:
               
296-664
               

               
Cow position:
               
chr9:62724347-62724710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
296-665
               

               
Cow position:
               
chr9:31215888-31216257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 182
               

               
Conread position:
               
296-673
               

               
Cow position:
               
chr9:10650481-10650127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr9:38792826-38793191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 120
               

               
Conread position:
               
296-674
               

               
Cow position:
               
chr9:41728069-41728434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
297-450
               

               
Cow position:
               
chr9:45170572-45170413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
297-453
               

               
Cow position:
               
chr9:3946328-3946177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
297-473
               

               
Cow position:
               
chr9:19657164-19656990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
297-483
               

               
Cow position:
               
chr9:21780735-21780920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr9:61019553-61019357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
297-495
               

               
Cow position:
               
chr9:11506109-11506309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
297-495
               

               
Cow position:
               
chr9:20017209-20017406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 159
               

               
Conread position:
               
297-500
               

               
Cow position:
               
chr9:12355597-12355799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
297-502
               

               
Cow position:
               
chr9:6929982-6929776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr9:32662224-32662015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 163
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr9:34196004-34196206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
297-509
               

               
Cow position:
               
chr9:20238159-20237946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
297-509
               

               
Cow position:
               
chr9:20394502-20394284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 185
               

               
Conread position:
               
297-509
               

               
Cow position:
               
chr9:44314896-44314684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr9:7543447-7543234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
297-521
               

               
Cow position:
               
chr9:41470289-41470064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
297-524
               

               
Cow position:
               
chr9:43679931-43680156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
297-529
               

               
Cow position:
               
chr9:52030289-52030520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
297-536
               

               
Cow position:
               
chr9:23971084-23970847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
297-538
               

               
Cow position:
               
chr9:6446919-6447158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
297-544
               

               
Cow position:
               
chr9:63361898-63361664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
297-545
               

               
Cow position:
               
chr9:42586736-42586496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
241, 88
               

               
Conread position:
               
297-557
               

               
Cow position:
               
chr9:44584412-44584662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
297-569
               

               
Cow position:
               
chr9:40507781-40507521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
297-603
               

               
Cow position:
               
chr9:51717782-51717469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
297-609
               

               
Cow position:
               
chr9:33584872-33584565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
297-610
               

               
Cow position:
               
chr9:11309667-11309981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
297-627
               

               
Cow position:
               
chr9:44396471-44396795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
297-659
               

               
Cow position:
               
chr9:20322278-20321942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
297-665
               

               
Cow position:
               
chr9:48563892-48564251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
297-665
               

               
Cow position:
               
chr9:51721071-51720733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
297-668
               

               
Cow position:
               
chr9:25965026-25964656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
297-668
               

               
Cow position:
               
chr9:35028355-35027994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
297-669
               

               
Cow position:
               
chr9:43207564-43207204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
297-670
               

               
Cow position:
               
chr9:8723612-8723966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
297-673
               

               
Cow position:
               
chr9:26057617-26057263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:6839800-6840185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:9199958-9199606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:9753587-9753211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:42061905-42062290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 164
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:53762508-53762875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
297-674
               

               
Cow position:
               
chr9:58448317-58447945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
298-449
               

               
Cow position:
               
chr9:34001182-34001025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
298-479
               

               
Cow position:
               
chr9:51891064-51891238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
298-499
               

               
Cow position:
               
chr9:17785753-17785554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr9:13230410-13230202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr9:35403392-35403605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
298-514
               

               
Cow position:
               
chr9:63700953-63700746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
298-542
               

               
Cow position:
               
chr9:39315681-39315904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
298-621
               

               
Cow position:
               
chr9:4629924-4630234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 20
               

               
Conread position:
               
298-665
               

               
Cow position:
               
chr9:5456358-5456005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr9:20901304-20900944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 20
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr9:22434111-22433754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr9:34697489-34697119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 163
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr9:34902288-34901938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
298-674
               

               
Cow position:
               
chr9:40215059-40215421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
299-477
               

               
Cow position:
               
chr9:24000940-24000768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
299-480
               

               
Cow position:
               
chr9:48046346-48046532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
299-500
               

               
Cow position:
               
chr9:43352789-43352989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
299-515
               

               
Cow position:
               
chr9:31344795-31344579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr9:12398411-12398685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
299-620
               

               
Cow position:
               
chr9:35845207-35844883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
299-628
               

               
Cow position:
               
chr9:26279359-26279035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
299-657
               

               
Cow position:
               
chr9:11304276-11303917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 197
               

               
Conread position:
               
299-668
               

               
Cow position:
               
chr9:30137936-30138300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
299-673
               

               
Cow position:
               
chr9:48118865-48118520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr9:7409589-7409960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr9:35128291-35128674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
299-674
               

               
Cow position:
               
chr9:45285727-45285353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
300-502
               

               
Cow position:
               
chr9:8016687-8016887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
300-505
               

               
Cow position:
               
chr9:48808962-48809156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
300-506
               

               
Cow position:
               
chr9:22447479-22447276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
300-536
               

               
Cow position:
               
chr9:38866162-38865934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
300-603
               

               
Cow position:
               
chr9:23956165-23955872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
300-651
               

               
Cow position:
               
chr9:40005292-40005636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr9:18380683-18381037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr9:20406468-20406812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr9:45141785-45141427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr9:51566683-51566304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 158
               

               
Conread position:
               
300-674
               

               
Cow position:
               
chr9:56065385-56065726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
301-481
               

               
Cow position:
               
chr9:62136300-62136120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
301-484
               

               
Cow position:
               
chr9:44918463-44918283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
301-506
               

               
Cow position:
               
chr9:24079126-24079321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
301-519
               

               
Cow position:
               
chr9:55013525-55013298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
301-584
               

               
Cow position:
               
chr9:35832798-35832523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
301-643
               

               
Cow position:
               
chr9:39011652-39011325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
301-643
               

               
Cow position:
               
chr9:52267947-52267605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
301-662
               

               
Cow position:
               
chr9:47591168-47590814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
87, 157
               

               
Conread position:
               
302-487
               

               
Cow position:
               
chr9:11380828-11380646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
302-508
               

               
Cow position:
               
chr9:34276398-34276189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
302-515
               

               
Cow position:
               
chr9:11950216-11950002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
302-637
               

               
Cow position:
               
chr9:32670131-32669802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
302-638
               

               
Cow position:
               
chr9:20579771-20579459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
265, 98
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr9:14975113-14974752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 162
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr9:47500383-47500029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
303-450
               

               
Cow position:
               
chr9:47469100-47469247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
303-578
               

               
Cow position:
               
chr9:63169787-63170056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 155
               

               
Conread position:
               
303-674
               

               
Cow position:
               
chr9:6934267-6933896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr9:36624111-36623903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
304-513
               

               
Cow position:
               
chr9:2397629-2397833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
304-515
               

               
Cow position:
               
chr9:9557500-9557714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
304-530
               

               
Cow position:
               
chr9:59897415-59897632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
220, 146
               

               
Conread position:
               
304-634
               

               
Cow position:
               
chr9:11969007-11969330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
305-492
               

               
Cow position:
               
chr9:44625039-44625217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
305-492
               

               
Cow position:
               
chr9:53179200-53179017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr9:33128032-33127842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr9:61286581-61286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
305-511
               

               
Cow position:
               
chr9:36401843-36401641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
305-515
               

               
Cow position:
               
chr9:35466709-35466494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
305-544
               

               
Cow position:
               
chr9:14738072-14738304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
305-550
               

               
Cow position:
               
chr9:50310943-50310703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
305-563
               

               
Cow position:
               
chr9:34484409-34484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
305-583
               

               
Cow position:
               
chr9:26102551-26102815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
305-593
               

               
Cow position:
               
chr9:28263337-28263619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
305-595
               

               
Cow position:
               
chr9:8716966-8716665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
305-608
               

               
Cow position:
               
chr9:54492963-54493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
305-610
               

               
Cow position:
               
chr9:25583651-25583949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
305-626
               

               
Cow position:
               
chr9:46981402-46981094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
305-647
               

               
Cow position:
               
chr9:11123659-11123327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
305-665
               

               
Cow position:
               
chr9:17872287-17871935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 147
               

               
Conread position:
               
305-668
               

               
Cow position:
               
chr9:60395231-60394879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
305-672
               

               
Cow position:
               
chr9:56032497-56032153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr9:6397968-6397603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 154
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr9:52130832-52131199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
86, 141
               

               
Conread position:
               
306-492
               

               
Cow position:
               
chr9:27686404-27686590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
306-510
               

               
Cow position:
               
chr9:151688-151891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr9:11098634-11098414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
306-536
               

               
Cow position:
               
chr9:39709673-39709906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
306-571
               

               
Cow position:
               
chr9:8629091-8628836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
306-582
               

               
Cow position:
               
chr9:5650137-5649882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
306-665
               

               
Cow position:
               
chr9:5263325-5263669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr9:13169845-13169488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr9:20090881-20091219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr9:22637921-22638281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
306-674
               

               
Cow position:
               
chr9:44822501-44822124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
307-487
               

               
Cow position:
               
chr9:11873473-11873304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
307-670
               

               
Cow position:
               
chr9:1729865-1729499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
307-670
               

               
Cow position:
               
chr9:21460331-21459984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
308-450
               

               
Cow position:
               
chr9:34355955-34355809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
308-492
               

               
Cow position:
               
chr9:16216801-16216986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
309-519
               

               
Cow position:
               
chr9:61847292-61847099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
310-505
               

               
Cow position:
               
chr9:53061478-53061680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
310-510
               

               
Cow position:
               
chr9:44759101-44758908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
310-512
               

               
Cow position:
               
chr9:12495040-12495240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
310-514
               

               
Cow position:
               
chr9:54598498-54598698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
310-545
               

               
Cow position:
               
chr9:45749257-45749497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
310-593
               

               
Cow position:
               
chr9:52755027-52754755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr9:53139309-53138953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
310-674
               

               
Cow position:
               
chr9:55117907-55118257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 150
               

               
Conread position:
               
311-505
               

               
Cow position:
               
chr9:40856001-40855807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:27345763-27345533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
312-513
               

               
Cow position:
               
chr9:40603494-40603694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
312-622
               

               
Cow position:
               
chr9:20942792-20942479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr9:8547636-8547993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr9:32676504-32676860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
312-674
               

               
Cow position:
               
chr9:42264048-42264395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
161, 71
               

               
Conread position:
               
313-484
               

               
Cow position:
               
chr9:17769149-17769315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
313-492
               

               
Cow position:
               
chr9:48367701-48367520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr9:55807462-55807649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
313-616
               

               
Cow position:
               
chr9:39211439-39211731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
194, 78
               

               
Conread position:
               
313-668
               

               
Cow position:
               
chr9:15215862-15215510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr9:29091598-29091978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 245
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr9:33940425-33940785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
313-674
               

               
Cow position:
               
chr9:37016729-37017062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr9:12773523-12773714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
314-530
               

               
Cow position:
               
chr9:30012700-30012916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
314-532
               

               
Cow position:
               
chr9:36627951-36628162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
314-544
               

               
Cow position:
               
chr9:4241236-4241461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
314-545
               

               
Cow position:
               
chr9:34768452-34768683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
314-608
               

               
Cow position:
               
chr9:38941608-38941315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
314-674
               

               
Cow position:
               
chr9:56453175-56453506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
314-674
               

               
Cow position:
               
chr9:61302832-61303181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
315-450
               

               
Cow position:
               
chr9:20355698-20355835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
315-488
               

               
Cow position:
               
chr9:57642343-57642508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr9:35932984-35932802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
315-508
               

               
Cow position:
               
chr9:4257147-4256966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
315-509
               

               
Cow position:
               
chr9:20828734-20828924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
315-513
               

               
Cow position:
               
chr9:59586145-59586337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr9:24191325-24191125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr9:45444989-45445192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr9:45483939-45484139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr9:5068667-5068870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
315-517
               

               
Cow position:
               
chr9:62631837-62631641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr9:8767585-8767381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
315-529
               

               
Cow position:
               
chr9:9459819-9460023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
159, 66
               

               
Conread position:
               
315-544
               

               
Cow position:
               
chr9:37198956-37199182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr9:33151579-33151798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr9:35049310-35049529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr9:52763923-52763704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
315-582
               

               
Cow position:
               
chr9:58662073-58662329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
315-584
               

               
Cow position:
               
chr9:17840849-17840582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
315-587
               

               
Cow position:
               
chr9:56262279-56262013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
315-589
               

               
Cow position:
               
chr9:8834301-8834032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
315-589
               

               
Cow position:
               
chr9:17277062-17276789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
315-593
               

               
Cow position:
               
chr9:3356927-3356654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
315-594
               

               
Cow position:
               
chr9:35547095-35547374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 143
               

               
Conread position:
               
315-602
               

               
Cow position:
               
chr9:17677287-17677003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
315-606
               

               
Cow position:
               
chr9:50125770-50125479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
315-610
               

               
Cow position:
               
chr9:9311689-9311978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
315-610
               

               
Cow position:
               
chr9:45728607-45728897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
315-613
               

               
Cow position:
               
chr9:20755929-20755633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
315-622
               

               
Cow position:
               
chr9:28917655-28917348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
315-631
               

               
Cow position:
               
chr9:10905990-10905671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
315-632
               

               
Cow position:
               
chr9:3573294-3573610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
315-642
               

               
Cow position:
               
chr9:51620274-51620588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
315-655
               

               
Cow position:
               
chr9:27279136-27279468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr9:32019497-32019157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
220, 71
               

               
Conread position:
               
315-673
               

               
Cow position:
               
chr9:17634995-17634658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:5327092-5327432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:8998183-8998534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 45
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:9443772-9443419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:26440984-26440622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:49374012-49374367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:52485084-52484739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 182
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:52689784-52689447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
315-674
               

               
Cow position:
               
chr9:55256719-55256373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
214, 135
               

               
Conread position:
               
315-677
               

               
Cow position:
               
chr9:22408587-22408933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
316-508
               

               
Cow position:
               
chr9:26394517-26394329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
316-622
               

               
Cow position:
               
chr9:32815483-32815772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
317-674
               

               
Cow position:
               
chr9:43623097-43623434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
318-450
               

               
Cow position:
               
chr9:9759736-9759608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
318-493
               

               
Cow position:
               
chr9:63185864-63185688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
318-505
               

               
Cow position:
               
chr9:16115772-16115590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
318-506
               

               
Cow position:
               
chr9:55892434-55892246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
318-509
               

               
Cow position:
               
chr9:13993596-13993787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 139
               

               
Conread position:
               
318-511
               

               
Cow position:
               
chr9:28718550-28718736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
318-528
               

               
Cow position:
               
chr9:7805617-7805815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
318-541
               

               
Cow position:
               
chr9:39135786-39135574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
318-584
               

               
Cow position:
               
chr9:5342413-5342159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
319-491
               

               
Cow position:
               
chr9:61301143-61300973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
319-492
               

               
Cow position:
               
chr9:36634338-36634512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr9:40984338-40984523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr9:34362570-34362763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
319-516
               

               
Cow position:
               
chr9:22804135-22803942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
319-539
               

               
Cow position:
               
chr9:21292573-21292355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
319-570
               

               
Cow position:
               
chr9:34279225-34278976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
319-579
               

               
Cow position:
               
chr9:29819560-29819803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
319-580
               

               
Cow position:
               
chr9:7806120-7805874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
319-580
               

               
Cow position:
               
chr9:34024533-34024790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
319-621
               

               
Cow position:
               
chr9:1878164-1877878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
319-638
               

               
Cow position:
               
chr9:63896380-63896682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
319-669
               

               
Cow position:
               
chr9:64105737-64106080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr9:4861230-4861562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr9:9596116-9595781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr9:52407004-52407343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-671
               

               
Cow position:
               
chr9:24887039-24887373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr9:41282846-41283199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
319-672
               

               
Cow position:
               
chr9:42497662-42498005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 117
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:5500698-5501035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:6192623-6192285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:26403629-26403963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:36491070-36490714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:41679596-41679923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
319-674
               

               
Cow position:
               
chr9:49764479-49764833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 234
               

               
Conread position:
               
320-517
               

               
Cow position:
               
chr9:34707475-34707282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
320-561
               

               
Cow position:
               
chr9:33822952-33823193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr9:60080728-60081046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
320-638
               

               
Cow position:
               
chr9:63785074-63784781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 61
               

               
Conread position:
               
320-668
               

               
Cow position:
               
chr9:22152247-22151913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
320-674
               

               
Cow position:
               
chr9:8901394-8901046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
320-674
               

               
Cow position:
               
chr9:17799470-17799805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 93
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr9:5757141-5756946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
321-579
               

               
Cow position:
               
chr9:5110692-5110947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
321-643
               

               
Cow position:
               
chr9:26345126-26344817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
321-671
               

               
Cow position:
               
chr9:10118831-10118490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr9:389161-388834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
237, 21
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr9:28726893-28726543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
321-674
               

               
Cow position:
               
chr9:30123766-30124098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
322-606
               

               
Cow position:
               
chr9:9358655-9358927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
224, 18
               

               
Conread position:
               
323-531
               

               
Cow position:
               
chr9:54986323-54986112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
67, 139
               

               
Conread position:
               
323-638
               

               
Cow position:
               
chr9:18425747-18426063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr9:61909223-61909404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
324-663
               

               
Cow position:
               
chr9:1756312-1755975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
324-674
               

               
Cow position:
               
chr9:22443784-22443444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 78
               

               
Conread position:
               
324-674
               

               
Cow position:
               
chr9:61738760-61739096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
326-485
               

               
Cow position:
               
chr9:58440538-58440372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
326-554
               

               
Cow position:
               
chr9:55529644-55529860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
326-674
               

               
Cow position:
               
chr9:10010653-10010982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
327-480
               

               
Cow position:
               
chr9:28342813-28342658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
327-505
               

               
Cow position:
               
chr9:52998536-52998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
327-513
               

               
Cow position:
               
chr9:3847237-3847428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
327-515
               

               
Cow position:
               
chr9:37955332-37955143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
327-521
               

               
Cow position:
               
chr9:7101276-7101476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
327-530
               

               
Cow position:
               
chr9:22165875-22165670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
327-584
               

               
Cow position:
               
chr9:25400345-25400104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
211, 53
               

               
Conread position:
               
327-665
               

               
Cow position:
               
chr9:63153972-63153643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr9:12226143-12225808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr9:25804670-25805012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr9:29185298-29184955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 131
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr9:31346791-31347132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
327-674
               

               
Cow position:
               
chr9:34958210-34957877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
330-477
               

               
Cow position:
               
chr9:11200095-11199947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
330-484
               

               
Cow position:
               
chr9:18163512-18163358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr9:14357257-14357427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
330-503
               

               
Cow position:
               
chr9:32773067-32773229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
330-544
               

               
Cow position:
               
chr9:31514090-31513884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
330-584
               

               
Cow position:
               
chr9:5469714-5469955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
330-628
               

               
Cow position:
               
chr9:31359450-31359737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
330-670
               

               
Cow position:
               
chr9:3070572-3070244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr9:3185974-3186316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr9:18216067-18215731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
330-674
               

               
Cow position:
               
chr9:55288044-55287720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
331-519
               

               
Cow position:
               
chr9:44944627-44944446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
331-627
               

               
Cow position:
               
chr9:55438586-55438289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
211, 119
               

               
Conread position:
               
331-674
               

               
Cow position:
               
chr9:29006405-29006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
331-674
               

               
Cow position:
               
chr9:32307388-32307059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
335-571
               

               
Cow position:
               
chr9:58369143-58368912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
203, 117
               

               
Conread position:
               
335-610
               

               
Cow position:
               
chr9:33043690-33043411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
336-541
               

               
Cow position:
               
chr9:47214699-47214492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
336-613
               

               
Cow position:
               
chr9:46930311-46930580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
336-638
               

               
Cow position:
               
chr9:4263238-4262946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
336-638
               

               
Cow position:
               
chr9:34283804-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
336-658
               

               
Cow position:
               
chr9:30402578-30402258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
336-674
               

               
Cow position:
               
chr9:8919855-8920176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 91
               

               
Conread position:
               
337-529
               

               
Cow position:
               
chr9:53123938-53124131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
337-579
               

               
Cow position:
               
chr9:24652251-24652499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
338-506
               

               
Cow position:
               
chr9:27308025-27307867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
338-515
               

               
Cow position:
               
chr9:44775556-44775734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
338-529
               

               
Cow position:
               
chr9:17711772-17711964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
338-529
               

               
Cow position:
               
chr9:20637228-20637415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
338-545
               

               
Cow position:
               
chr9:55495136-55494929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
338-577
               

               
Cow position:
               
chr9:33541905-33542142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
338-620
               

               
Cow position:
               
chr9:54411308-54411021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
338-632
               

               
Cow position:
               
chr9:62471530-62471809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
338-673
               

               
Cow position:
               
chr9:21030157-21030489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
339-583
               

               
Cow position:
               
chr9:33838454-33838219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
342-538
               

               
Cow position:
               
chr9:48115540-48115730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
343-529
               

               
Cow position:
               
chr9:53454582-53454395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
343-674
               

               
Cow position:
               
chr9:64091544-64091862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
344-584
               

               
Cow position:
               
chr9:5164129-5163892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr9:20319189-20319014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
345-673
               

               
Cow position:
               
chr9:9815270-9815592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
345-673
               

               
Cow position:
               
chr9:16300717-16300389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr9:33120031-33119708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
346-545
               

               
Cow position:
               
chr9:64629502-64629309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
346-654
               

               
Cow position:
               
chr9:5836006-5836317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
346-670
               

               
Cow position:
               
chr9:20416653-20416341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
347-674
               

               
Cow position:
               
chr9:47906428-47906102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
350-492
               

               
Cow position:
               
chr9:44093220-44093077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
350-670
               

               
Cow position:
               
chr9:44834100-44833790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
351-674
               

               
Cow position:
               
chr9:43870852-43871157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
352-598
               

               
Cow position:
               
chr9:4580524-4580303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
352-643
               

               
Cow position:
               
chr9:33696915-33697178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
352-670
               

               
Cow position:
               
chr9:41513504-41513798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
352-674
               

               
Cow position:
               
chr9:11168603-11168908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
352-674
               

               
Cow position:
               
chr9:47446151-47445849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
354-621
               

               
Cow position:
               
chr9:52513576-52513323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
356-545
               

               
Cow position:
               
chr9:5665942-5666123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
356-639
               

               
Cow position:
               
chr9:6596354-6596087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
361-606
               

               
Cow position:
               
chr9:64064484-64064246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
362-598
               

               
Cow position:
               
chr9:45171346-45171112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
369-674
               

               
Cow position:
               
chr9:61997715-61997421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
375-668
               

               
Cow position:
               
chr9:10309104-10308836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
378-674
               

               
Cow position:
               
chr9:44467444-44467175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
380-577
               

               
Cow position:
               
chr9:41781552-41781740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
380-665
               

               
Cow position:
               
chr9:64559984-64559715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
380-670
               

               
Cow position:
               
chr9:42446084-42445805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
380-674
               

               
Cow position:
               
chr9:3738326-3738044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
381-590
               

               
Cow position:
               
chr9:43342230-43342429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr9:15225397-15225159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr9:4646424-4646155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
221, 23
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr9:35105891-35105609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 71
               

               
Conread position:
               
381-671
               

               
Cow position:
               
chr9:38615063-38614785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:1520840-1520556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:1972847-1973120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:8288517-8288795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:9654408-9654134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:11068580-11068293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:11319735-11319456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:18217200-18216926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:21888071-21888347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:31638758-31638463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr9:50139186-50139463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
382-672
               

               
Cow position:
               
chr9:33237295-33237568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
263, 57
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr9:5245754-5246033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr9:11313614-11313332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr9:17411293-17411002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 67
               

               
Conread position:
               
382-674
               

               
Cow position:
               
chr9:36445514-36445801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
383-598
               

               
Cow position:
               
chr9:18828153-18827948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
383-674
               

               
Cow position:
               
chr9:28354418-28354696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
384-595
               

               
Cow position:
               
chr9:23788341-23788541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
384-673
               

               
Cow position:
               
chr9:55075227-55074953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
384-674
               

               
Cow position:
               
chr9:50081138-50080868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
386-610
               

               
Cow position:
               
chr9:52598817-52598605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
386-670
               

               
Cow position:
               
chr9:17518583-17518315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
386-672
               

               
Cow position:
               
chr9:62442196-62442466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
386-674
               

               
Cow position:
               
chr9:3774069-3774340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
386-674
               

               
Cow position:
               
chr9:54528418-54528689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
387-668
               

               
Cow position:
               
chr9:30652806-30652534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
387-671
               

               
Cow position:
               
chr9:7634176-7634448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
163, 68
               

               
Conread position:
               
387-674
               

               
Cow position:
               
chr9:64050656-64050378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
388-674
               

               
Cow position:
               
chr9:8337933-8338204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
388-674
               

               
Cow position:
               
chr9:32371843-32371583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
390-664
               

               
Cow position:
               
chr9:17310654-17310387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
391-657
               

               
Cow position:
               
chr9:45756273-45756534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
162, 11
               

               
Conread position:
               
394-534
               

               
Cow position:
               
chr9:34014337-34014202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
394-638
               

               
Cow position:
               
chr9:52839967-52839740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
394-658
               

               
Cow position:
               
chr9:42478570-42478304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
394-670
               

               
Cow position:
               
chr9:43443716-43443970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
394-671
               

               
Cow position:
               
chr9:55084389-55084122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
395-632
               

               
Cow position:
               
chr9:10819915-10819692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
395-670
               

               
Cow position:
               
chr9:25921737-25921998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
395-675
               

               
Cow position:
               
chr9:50543513-50543245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
396-674
               

               
Cow position:
               
chr9:5763716-5763456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
397-663
               

               
Cow position:
               
chr9:39681254-39681516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
233, 55
               

               
Conread position:
               
399-674
               

               
Cow position:
               
chr9:7362945-7363203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
402-674
               

               
Cow position:
               
chr9:55889735-55889985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
405-674
               

               
Cow position:
               
chr9:6879702-6879944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
406-670
               

               
Cow position:
               
chr9:5509650-5509895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
406-670
               

               
Cow position:
               
chr9:60027121-60027371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
407-671
               

               
Cow position:
               
chr9:19493541-19493288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
407-671
               

               
Cow position:
               
chr9:23431222-23430971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
410-674
               

               
Cow position:
               
chr9:44921472-44921213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 119
               

               
Conread position:
               
412-598
               

               
Cow position:
               
chr9:40776728-40776904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
416-659
               

               
Cow position:
               
chr9:43936879-43937108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
222, 36
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr9:35375359-35375601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
418-645
               

               
Cow position:
               
chr9:26310442-26310659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
418-670
               

               
Cow position:
               
chr9:39577675-39577911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
418-674
               

               
Cow position:
               
chr9:1949853-1950094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
419-669
               

               
Cow position:
               
chr9:5209517-5209753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
420-674
               

               
Cow position:
               
chr9:49416925-49417165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
421-674
               

               
Cow position:
               
chr9:24997578-24997344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
423-669
               

               
Cow position:
               
chr9:5575257-5575492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
431-662
               

               
Cow position:
               
chr9:22114686-22114469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
438-674
               

               
Cow position:
               
chr9:41789236-41789461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
457-584
               

               
Cow position:
               
chr9:48100765-48100890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
457-669
               

               
Cow position:
               
chr9:9823536-9823333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
457-669
               

               
Cow position:
               
chr9:32817172-32816961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
457-670
               

               
Cow position:
               
chr9:17928727-17928933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr9:6089058-6089276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr9:20989488-20989276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
457-674
               

               
Cow position:
               
chr9:38343860-38344068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
458-670
               

               
Cow position:
               
chr9:34468607-34468411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
459-673
               

               
Cow position:
               
chr9:6225482-6225275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
459-674
               

               
Cow position:
               
chr9:9416423-9416225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
462-605
               

               
Cow position:
               
chr9:35591986-35592127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
463-674
               

               
Cow position:
               
chr9:1952294-1952091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
463-674
               

               
Cow position:
               
chr9:3387665-3387869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
464-673
               

               
Cow position:
               
chr9:3371544-3371750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
466-674
               

               
Cow position:
               
chr9:41853411-41853620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 170
               

               
Conread position:
               
467-673
               

               
Cow position:
               
chr9:5319600-5319806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
469-674
               

               
Cow position:
               
chr9:58134041-58133848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
470-674
               

               
Cow position:
               
chr9:50703128-50702938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
480-670
               

               
Cow position:
               
chr9:32710922-32711104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
482-674
               

               
Cow position:
               
chr9:5531937-5532127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
483-673
               

               
Cow position:
               
chr9:31270775-31270956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
486-668
               

               
Cow position:
               
chr9:8524841-8525008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
489-674
               

               
Cow position:
               
chr9:10092391-10092208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
154, 6
               

               
Conread position:
               
494-665
               

               
Cow position:
               
chr9:29035029-29034863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr9:20738703-20738879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr9:26390776-26390942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
499-674
               

               
Cow position:
               
chr9:40603957-40604126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
500-671
               

               
Cow position:
               
chr9:4324144-4323983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
500-674
               

               
Cow position:
               
chr9:6118136-6117970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
503-675
               

               
Cow position:
               
chr9:34000604-34000441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
507-673
               

               
Cow position:
               
chr9:18002934-18002772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
513-674
               

               
Cow position:
               
chr9:32812375-32812522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
527-674
               

               
Cow position:
               
chr9:42998431-42998289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
549-674
               

               
Cow position:
               
chr9:41995767-41995888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
554-670
               

               
Cow position:
               
chr9:9490855-9490969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.