Cow genome map

Conread name: Lng1-LNG010084D12

Conread position: 1-127
Cow position: chr11:52983637-52983763 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr11:22499402-22499271 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 58

Conread position: 1-139
Cow position: chr11:17321609-17321750 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 93, 75

Conread position: 1-140
Cow position: chr11:4430171-4430035 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 1-146
Cow position: chr11:4653011-4652865 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 1-147
Cow position: chr11:82731036-82730889 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-148
Cow position: chr11:22747366-22747221 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 35

Conread position: 1-148
Cow position: chr11:79019097-79018949 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr11:7590154-7590299 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 61

Conread position: 1-149
Cow position: chr11:17831259-17831112 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 46

Conread position: 1-149
Cow position: chr11:34692815-34692966 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr11:40573370-40573223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 46

Conread position: 1-149
Cow position: chr11:47004310-47004456 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 103

Conread position: 1-149
Cow position: chr11:50072899-50073048 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr11:56290473-56290622 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr11:69307475-69307624 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr11:83230438-83230290 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 37

Conread position: 1-150
Cow position: chr11:44636793-44636643 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 131

Conread position: 1-150
Cow position: chr11:63909702-63909555 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 58

Conread position: 1-156
Cow position: chr11:76114608-76114760 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 91

Conread position: 1-160
Cow position: chr11:18608276-18608109 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-163
Cow position: chr11:23586600-23586762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 155

Conread position: 1-172
Cow position: chr11:59872892-59873063 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 57

Conread position: 1-175
Cow position: chr11:20602187-20602361 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 87

Conread position: 1-183
Cow position: chr11:8988268-8988085 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 75

Conread position: 1-184
Cow position: chr11:49934769-49934591 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 1-189
Cow position: chr11:58927545-58927730 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 124, 70

Conread position: 1-199
Cow position: chr11:27565295-27565486 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 130, 60

Conread position: 1-199
Cow position: chr11:46747899-46747689 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 1-200
Cow position: chr11:34467533-34467733 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 9

Conread position: 1-201
Cow position: chr11:36920616-36920406 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 190

Conread position: 1-201
Cow position: chr11:62889932-62889720 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 1-203
Cow position: chr11:35109576-35109366 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 46

Conread position: 1-204
Cow position: chr11:55761830-55762031 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 185, 119

Conread position: 1-204
Cow position: chr11:83926011-83926206 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 33

Conread position: 1-204
Cow position: chr11:84977397-84977199 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 137

Conread position: 1-208
Cow position: chr11:41313695-41313483 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 1-208
Cow position: chr11:51729248-51729453 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 124, 141

Conread position: 1-211
Cow position: chr11:41603724-41603519 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 100

Conread position: 1-211
Cow position: chr11:45646631-45646416 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 68

Conread position: 1-211
Cow position: chr11:65826789-65826572 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 1-212
Cow position: chr11:35669990-35669783 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 124, 95

Conread position: 1-213
Cow position: chr11:6194368-6194572 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 185, 18

Conread position: 1-213
Cow position: chr11:6233918-6233694 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1-213
Cow position: chr11:8584289-8584499 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 183, 91

Conread position: 1-213
Cow position: chr11:17278710-17278499 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 57

Conread position: 1-213
Cow position: chr11:38639074-38639283 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 180, 23

Conread position: 1-213
Cow position: chr11:40459069-40459289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 193

Conread position: 1-213
Cow position: chr11:41549371-41549152 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 36

Conread position: 1-213
Cow position: chr11:43360815-43360603 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 34

Conread position: 1-213
Cow position: chr11:49149001-49149230 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-213
Cow position: chr11:63434096-63433881 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 131, 100

Conread position: 1-213
Cow position: chr11:70206283-70206499 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 18

Conread position: 1-213
Cow position: chr11:84890755-84890543 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 190, 84

Conread position: 1-214
Cow position: chr11:10095305-10095528 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 1-214
Cow position: chr11:13592697-13592924 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 1-214
Cow position: chr11:30172271-30172484 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 124, 53

Conread position: 1-214
Cow position: chr11:41986084-41985863 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 1-214
Cow position: chr11:56114902-56115122 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 17

Conread position: 1-214
Cow position: chr11:63065617-63065837 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 34

Conread position: 1-214
Cow position: chr11:68913102-68913328 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-214
Cow position: chr11:77546377-77546581 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 1-214
Cow position: chr11:82940656-82940445 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 131, 18

Conread position: 1-215
Cow position: chr11:17227680-17227464 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 61

Conread position: 1-215
Cow position: chr11:18698839-18699057 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 136

Conread position: 1-215
Cow position: chr11:53778578-53778806 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 1-216
Cow position: chr11:17721840-17721612 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 0

Conread position: 1-218
Cow position: chr11:15772750-15772524 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 45

Conread position: 1-218
Cow position: chr11:27462136-27461922 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 63

Conread position: 1-218
Cow position: chr11:46922924-46922698 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 1-218
Cow position: chr11:49152911-49153129 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 63

Conread position: 1-218
Cow position: chr11:66188355-66188132 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 124, 115

Conread position: 1-218
Cow position: chr11:75874793-75874583 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 189, 118

Conread position: 1-221
Cow position: chr11:19946397-19946613 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 108

Conread position: 1-226
Cow position: chr11:36112385-36112608 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 46

Conread position: 1-226
Cow position: chr11:42083434-42083651 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 183, 59

Conread position: 1-226
Cow position: chr11:46746593-46746833 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 174

Conread position: 1-231
Cow position: chr11:30210871-30211086 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 1-232
Cow position: chr11:50472279-50472521 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 30

Conread position: 1-234
Cow position: chr11:36658857-36658635 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 218, 46

Conread position: 1-234
Cow position: chr11:70756444-70756680 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 36

Conread position: 1-235
Cow position: chr11:42066823-42067069 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 25

Conread position: 1-236
Cow position: chr11:80616205-80616420 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 1-238
Cow position: chr11:30708468-30708716 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 89

Conread position: 1-241
Cow position: chr11:4663085-4662853 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 176, 0

Conread position: 1-241
Cow position: chr11:39462585-39462829 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 115, 220

Conread position: 1-241
Cow position: chr11:52690558-52690315 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 137, 67

Conread position: 1-241
Cow position: chr11:84385675-84385426 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 49

Conread position: 1-242
Cow position: chr11:2084105-2084360 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1-242
Cow position: chr11:27913246-27913498 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 235

Conread position: 1-242
Cow position: chr11:77013746-77013981 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 183, 42

Conread position: 1-246
Cow position: chr11:7924627-7924387 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 71

Conread position: 2-198
Cow position: chr11:26633051-26632844 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 2-200
Cow position: chr11:73354097-73353896 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 135

Conread position: 2-205
Cow position: chr11:13043183-13042972 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 2-210
Cow position: chr11:29786536-29786312 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 2-211
Cow position: chr11:3797679-3797886 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 56

Conread position: 2-213
Cow position: chr11:68905114-68904904 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 42

Conread position: 2-218
Cow position: chr11:9270762-9270549 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 123, 45

Conread position: 2-218
Cow position: chr11:22977911-22977693 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 184

Conread position: 2-218
Cow position: chr11:27719356-27719150 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 54

Conread position: 2-218
Cow position: chr11:47837283-47837508 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 35

Conread position: 2-222
Cow position: chr11:26144134-26143905 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 194

Conread position: 2-235
Cow position: chr11:62742680-62742441 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 52

Conread position: 2-241
Cow position: chr11:15369350-15369601 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 3-148
Cow position: chr11:48474667-48474813 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 3-148
Cow position: chr11:58938781-58938635 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 3-149
Cow position: chr11:58173589-58173735 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 122, 63

Conread position: 3-198
Cow position: chr11:63435485-63435691 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 58

Conread position: 3-208
Cow position: chr11:21844168-21843960 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 25

Conread position: 3-208
Cow position: chr11:30638986-30638773 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 3-213
Cow position: chr11:46427444-46427223 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 3-213
Cow position: chr11:70978770-70978551 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 108

Conread position: 3-218
Cow position: chr11:11125627-11125854 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 3-225
Cow position: chr11:84764001-84764213 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 122, 16

Conread position: 3-242
Cow position: chr11:39249936-39250179 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 98

Conread position: 3-247
Cow position: chr11:64048367-64048609 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 132

Conread position: 4-149
Cow position: chr11:69075876-69076021 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 33

Conread position: 4-207
Cow position: chr11:21852338-21852138 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 116

Conread position: 4-218
Cow position: chr11:33348222-33348010 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 178, 0

Conread position: 4-241
Cow position: chr11:14470335-14470572 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 15

Conread position: 5-149
Cow position: chr11:16907083-16906940 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 55

Conread position: 5-149
Cow position: chr11:26845628-26845484 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-149
Cow position: chr11:41293852-41293707 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 5-149
Cow position: chr11:62150925-62150783 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 54

Conread position: 5-156
Cow position: chr11:28644053-28644205 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 5-199
Cow position: chr11:18851874-18852073 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 80

Conread position: 5-200
Cow position: chr11:77319380-77319583 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 5-207
Cow position: chr11:24601930-24602136 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 121

Conread position: 5-210
Cow position: chr11:38211611-38211822 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 5-211
Cow position: chr11:25119965-25119754 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 129, 33

Conread position: 5-212
Cow position: chr11:23407430-23407643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 5-212
Cow position: chr11:29960264-29960475 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 120, 50

Conread position: 5-212
Cow position: chr11:55494645-55494847 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 177, 116

Conread position: 5-212
Cow position: chr11:62812984-62812769 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 5-212
Cow position: chr11:67615279-67615069 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 120, 14

Conread position: 5-213
Cow position: chr11:64104965-64105177 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 17

Conread position: 5-213
Cow position: chr11:69977936-69978149 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 5-215
Cow position: chr11:62663266-62663060 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 54

Conread position: 5-218
Cow position: chr11:16801986-16801789 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 5-218
Cow position: chr11:40818661-40818444 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 27

Conread position: 5-224
Cow position: chr11:897639-897859 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 120, 125

Conread position: 5-225
Cow position: chr11:64044199-64044413 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 180, 115

Conread position: 5-228
Cow position: chr11:41144-41369 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 33

Conread position: 5-228
Cow position: chr11:20761813-20762051 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 67

Conread position: 5-238
Cow position: chr11:34646555-34646803 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 228

Conread position: 5-241
Cow position: chr11:2907557-2907323 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 53

Conread position: 5-242
Cow position: chr11:17676407-17676162 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 229

Conread position: 6-208
Cow position: chr11:67312746-67312964 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 7-132
Cow position: chr11:31352584-31352459 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-200
Cow position: chr11:42296652-42296456 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 155

Conread position: 7-213
Cow position: chr11:83032648-83032861 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 7-225
Cow position: chr11:83043395-83043172 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 214

Conread position: 9-218
Cow position: chr11:15017027-15017247 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 11

Conread position: 9-237
Cow position: chr11:55052841-55053071 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 116, 174

Conread position: 9-246
Cow position: chr11:10956902-10956657 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 15

Conread position: 10-150
Cow position: chr11:19606548-19606688 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 128

Conread position: 10-172
Cow position: chr11:34113235-34113402 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 10-184
Cow position: chr11:31410907-31410728 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 10-185
Cow position: chr11:39499327-39499508 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 10-196
Cow position: chr11:34121169-34121362 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 108

Conread position: 10-205
Cow position: chr11:26274985-26274790 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 10

Conread position: 10-208
Cow position: chr11:42160083-42159883 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 49

Conread position: 10-209
Cow position: chr11:45435050-45435255 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 30

Conread position: 10-212
Cow position: chr11:3896728-3896515 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 115, 33

Conread position: 10-212
Cow position: chr11:18447521-18447318 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 115, 122

Conread position: 10-212
Cow position: chr11:30355029-30355228 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 115, 122

Conread position: 10-212
Cow position: chr11:30830643-30830440 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 179

Conread position: 10-212
Cow position: chr11:30895033-30894820 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 10-215
Cow position: chr11:2925325-2925121 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 66

Conread position: 10-216
Cow position: chr11:27248464-27248675 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 115, 50

Conread position: 10-217
Cow position: chr11:62789101-62789314 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 115, 207

Conread position: 10-218
Cow position: chr11:259201-258984 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 10-225
Cow position: chr11:11558142-11558364 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 10-230
Cow position: chr11:48296004-48296224 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 44

Conread position: 10-230
Cow position: chr11:70250885-70251115 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 210

Conread position: 10-232
Cow position: chr11:40608623-40608390 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 54

Conread position: 10-237
Cow position: chr11:16314843-16315083 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 10-242
Cow position: chr11:8437723-8437480 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 115, 219

Conread position: 10-242
Cow position: chr11:63866688-63866447 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 28

Conread position: 11-234
Cow position: chr11:35536559-35536779 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 53

Conread position: 12-213
Cow position: chr11:11469675-11469473 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 110, 188

Conread position: 13-142
Cow position: chr11:62376499-62376370 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 66

Conread position: 13-210
Cow position: chr11:71390586-71390393 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 112, 7

Conread position: 13-211
Cow position: chr11:33409288-33409084 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 13-212
Cow position: chr11:18915000-18915193 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 170, 107

Conread position: 13-212
Cow position: chr11:20205878-20205675 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 13-212
Cow position: chr11:21885807-21886013 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 114, 67

Conread position: 13-212
Cow position: chr11:30843045-30842842 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 13-212
Cow position: chr11:48085892-48086101 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 13-213
Cow position: chr11:50152839-50152629 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 7

Conread position: 13-215
Cow position: chr11:80820029-80819839 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 13-217
Cow position: chr11:2917612-2917406 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 112, 94

Conread position: 13-218
Cow position: chr11:4637197-4636987 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 134, 7

Conread position: 13-220
Cow position: chr11:62620351-62620568 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 7

Conread position: 13-225
Cow position: chr11:30493970-30494183 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 112, 50

Conread position: 13-226
Cow position: chr11:63165673-63165454 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 112, 0

Conread position: 16-149
Cow position: chr11:69119270-69119405 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 16-195
Cow position: chr11:24599410-24599232 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 72

Conread position: 16-200
Cow position: chr11:8525136-8524947 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 56

Conread position: 16-201
Cow position: chr11:17083333-17083141 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 118

Conread position: 16-213
Cow position: chr11:31537463-31537264 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 57

Conread position: 16-213
Cow position: chr11:67600761-67600962 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 16-214
Cow position: chr11:19592016-19591811 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 109, 10

Conread position: 16-214
Cow position: chr11:82740486-82740677 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 16-218
Cow position: chr11:63382214-63382009 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 114, 191

Conread position: 16-222
Cow position: chr11:17559107-17559308 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 171, 101

Conread position: 16-225
Cow position: chr11:35213191-35212975 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 16-226
Cow position: chr11:30867160-30867374 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 16-236
Cow position: chr11:1932515-1932280 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 16-236
Cow position: chr11:78820128-78820357 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 50

Conread position: 16-242
Cow position: chr11:47784751-47784994 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 17-144
Cow position: chr11:43898117-43898244 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 21

Conread position: 17-213
Cow position: chr11:74316687-74316890 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 17-216
Cow position: chr11:65762613-65762398 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 102, 200

Conread position: 17-218
Cow position: chr11:62239722-62239930 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 17-220
Cow position: chr11:49872907-49872696 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 42

Conread position: 17-240
Cow position: chr11:44222867-44223091 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 41

Conread position: 17-245
Cow position: chr11:45350534-45350294 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 219

Conread position: 19-190
Cow position: chr11:9698882-9699048 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 106, 28

Conread position: 19-200
Cow position: chr11:28993758-28993577 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 79

Conread position: 19-210
Cow position: chr11:30964325-30964524 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 93, 41

Conread position: 20-213
Cow position: chr11:67614941-67614741 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 20-218
Cow position: chr11:31227943-31228142 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 103, 153

Conread position: 21-193
Cow position: chr11:905401-905233 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 26-185
Cow position: chr11:33993151-33993307 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 95

Conread position: 26-204
Cow position: chr11:17036541-17036357 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 26-213
Cow position: chr11:51196096-51195913 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 124

Conread position: 26-214
Cow position: chr11:48900858-48900674 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 115

Conread position: 26-217
Cow position: chr11:44031998-44032193 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 189

Conread position: 26-224
Cow position: chr11:30986628-30986830 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 33

Conread position: 27-188
Cow position: chr11:79707701-79707859 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 66

Conread position: 27-213
Cow position: chr11:15366985-15366794 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 27-214
Cow position: chr11:26535773-26535969 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 68

Conread position: 27-215
Cow position: chr11:37100181-37099986 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 98, 29

Conread position: 27-234
Cow position: chr11:49396538-49396320 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 90

Conread position: 27-241
Cow position: chr11:87172089-87171864 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 27-242
Cow position: chr11:77017229-77017443 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 157, 85

Conread position: 29-208
Cow position: chr11:48544427-48544615 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 30-213
Cow position: chr11:46784465-46784647 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 95, 38

Conread position: 30-214
Cow position: chr11:77227530-77227715 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 154, 9

Conread position: 30-215
Cow position: chr11:47724889-47725075 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 31

Conread position: 30-221
Cow position: chr11:1485236-1485041 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 113

Conread position: 31-212
Cow position: chr11:63999100-63998907 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 32-208
Cow position: chr11:45671377-45671201 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 105

Conread position: 32-214
Cow position: chr11:33368075-33368256 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 35-208
Cow position: chr11:66104400-66104214 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 37-218
Cow position: chr11:66041276-66041462 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 38-208
Cow position: chr11:63484936-63485111 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 38-209
Cow position: chr11:76248048-76248226 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 90

Conread position: 38-211
Cow position: chr11:30192177-30192360 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 38-212
Cow position: chr11:66685907-66685727 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 38-212
Cow position: chr11:71021999-71022183 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 129

Conread position: 38-225
Cow position: chr11:52297222-52297025 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 105

Conread position: 38-241
Cow position: chr11:67948743-67948545 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 149, 81

Conread position: 38-243
Cow position: chr11:37425149-37424946 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 21

Conread position: 38-243
Cow position: chr11:57767189-57767402 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 18

Conread position: 39-213
Cow position: chr11:36092917-36092735 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 129

Conread position: 39-214
Cow position: chr11:22884413-22884590 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 22

Conread position: 39-240
Cow position: chr11:58185882-58186083 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 86, 93

Conread position: 40-201
Cow position: chr11:30654656-30654820 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 107

Conread position: 40-213
Cow position: chr11:36300579-36300400 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 16

Conread position: 43-213
Cow position: chr11:82733145-82732966 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 10

Conread position: 46-237
Cow position: chr11:1625217-1625013 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 65

Conread position: 47-211
Cow position: chr11:4621423-4621253 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 47-220
Cow position: chr11:40538558-40538740 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 47-254
Cow position: chr11:19148129-19147917 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 80, 61

Conread position: 49-218
Cow position: chr11:19549490-19549666 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 50-213
Cow position: chr11:38223777-38223609 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 51

Conread position: 50-218
Cow position: chr11:4411858-4411684 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 155

Conread position: 50-240
Cow position: chr11:68570370-68570172 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 177

Conread position: 51-237
Cow position: chr11:80296841-80296651 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 178

Conread position: 52-225
Cow position: chr11:74839623-74839799 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 54-212
Cow position: chr11:83249417-83249578 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 133

Conread position: 61-196
Cow position: chr11:78672692-78672838 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 61-203
Cow position: chr11:15278991-15278844 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 61-212
Cow position: chr11:8422096-8421942 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 78

Conread position: 61-212
Cow position: chr11:62483940-62483791 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 64

Conread position: 61-215
Cow position: chr11:54872738-54872574 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 24

Conread position: 61-215
Cow position: chr11:63499108-63498945 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 61-217
Cow position: chr11:35580282-35580449 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 61-218
Cow position: chr11:3175695-3175857 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 61-218
Cow position: chr11:15591453-15591291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 61-221
Cow position: chr11:7617185-7617021 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 136

Conread position: 61-222
Cow position: chr11:19508279-19508431 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 61-222
Cow position: chr11:20238698-20238871 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 61-225
Cow position: chr11:33369172-33369348 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 61-230
Cow position: chr11:25721973-25721803 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 16

Conread position: 61-236
Cow position: chr11:44615146-44614959 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 61-241
Cow position: chr11:36182716-36182898 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 116

Conread position: 61-241
Cow position: chr11:80923302-80923113 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 62-212
Cow position: chr11:1841988-1842140 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 7

Conread position: 64-185
Cow position: chr11:62081943-62081819 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 64-196
Cow position: chr11:68206817-68206682 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 64-210
Cow position: chr11:53487129-53486979 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 64-212
Cow position: chr11:53651665-53651823 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 64-215
Cow position: chr11:37041996-37042160 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 64-244
Cow position: chr11:27746948-27747134 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 65-207
Cow position: chr11:64096640-64096489 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 65-212
Cow position: chr11:30857063-30857218 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 65-212
Cow position: chr11:42206447-42206599 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 65-222
Cow position: chr11:43965852-43965697 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 96

Conread position: 65-224
Cow position: chr11:49057417-49057577 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 86

Conread position: 66-212
Cow position: chr11:63483969-63484123 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 66-212
Cow position: chr11:71814733-71814885 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 66-213
Cow position: chr11:35276295-35276435 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 72

Conread position: 66-218
Cow position: chr11:75915020-75915174 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 34

Conread position: 66-220
Cow position: chr11:77241731-77241892 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 159

Conread position: 66-242
Cow position: chr11:64334862-64335040 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 160

Conread position: 66-277
Cow position: chr11:80556246-80556469 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 170

Conread position: 67-213
Cow position: chr11:81175624-81175782 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 69-213
Cow position: chr11:12528245-12528100 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 21

Conread position: 69-218
Cow position: chr11:18484159-18484012 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 117, 65

Conread position: 69-218
Cow position: chr11:73637884-73638044 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 28

Conread position: 70-212
Cow position: chr11:12768429-12768579 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 70-240
Cow position: chr11:63478403-63478572 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 70

Conread position: 72-212
Cow position: chr11:69676318-69676172 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 72-238
Cow position: chr11:4653222-4653052 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 143

Conread position: 73-199
Cow position: chr11:33289429-33289299 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 83

Conread position: 73-212
Cow position: chr11:75388341-75388194 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 73-213
Cow position: chr11:57170565-57170426 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 48

Conread position: 73-222
Cow position: chr11:17369564-17369719 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 73-240
Cow position: chr11:27688357-27688190 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 111

Conread position: 73-245
Cow position: chr11:2937630-2937457 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 63

Conread position: 74-214
Cow position: chr11:2830691-2830841 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 76-212
Cow position: chr11:33824869-33824731 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 44

Conread position: 76-213
Cow position: chr11:81340504-81340360 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 76-233
Cow position: chr11:28078530-28078694 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 78-205
Cow position: chr11:36209148-36209015 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 78-212
Cow position: chr11:3267617-3267485 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 39

Conread position: 78-213
Cow position: chr11:81928469-81928328 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 34

Conread position: 79-208
Cow position: chr11:2310115-2310246 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 58

Conread position: 79-211
Cow position: chr11:4602192-4602333 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 82-212
Cow position: chr11:6784251-6784388 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 27

Conread position: 82-213
Cow position: chr11:65431561-65431701 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 83-218
Cow position: chr11:63977101-63977244 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 84-218
Cow position: chr11:18154508-18154368 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 84-241
Cow position: chr11:32587079-32586918 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 134

Conread position: 96-207
Cow position: chr11:6154627-6154746 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 97-212
Cow position: chr11:22583018-22583134 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 104-213
Cow position: chr11:71146398-71146510 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 245-385
Cow position: chr11:41474822-41474674 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 254-402
Cow position: chr11:81175947-81175790 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.