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Cow genome map

           
Conread name:
           
Lng1-LNG010084D12
        

               
Conread position:
               
1-134
               

               
Cow position:
               
chr14:17841229-17841362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr14:19863370-19863511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr14:37883853-37883999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:19129569-19129420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:19951631-19951480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:22583212-22583067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr14:33830364-33830216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr14:33644020-33643872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:4991065-4990909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr14:20481780-20481935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr14:46998102-46997907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 136
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr14:5630225-5630019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr14:40165487-40165279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 107
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr14:606603-606802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:13928636-13928429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:18309244-18309453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr14:47672822-47673032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:7695330-7695109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:12884326-12884109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:4203035-4203248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:12081071-12081282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 127
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:11577131-11576912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:12033178-12033402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:35503425-35503206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:4282446-4282668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:11056670-11056891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:21933280-21933502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 213
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:22941665-22941898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:29965082-29964859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:36442955-36443175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:37422727-37422931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:50589337-50589548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:7198561-7198336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:18941223-18941447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:23103938-23104155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:2975030-2975246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:19618688-19618903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 115
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:26655071-26655297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:6541661-6541890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:7036294-7036523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:8541149-8541369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 213
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:23078729-23078955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:24236888-24236659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:24387510-24387288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:40208961-40208744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:5958924-5959160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:14622115-14622337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
183, 44
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:4227158-4227402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 170
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:8786487-8786720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 58
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:42154909-42155149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:49941071-49940833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:1868730-1868976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:8101853-8101610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:12511838-12512075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr14:35381653-35381402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:49021837-49022068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr14:4877168-4877417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:13809997-13809764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
185, 25
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:27733665-27733406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 100
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr14:38144044-38144319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 229
               

               
Conread position:
               
2-133
               

               
Cow position:
               
chr14:33309441-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr14:37902055-37901855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr14:21535244-21535461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr14:23424321-23424107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr14:23443082-23442868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr14:20466992-20466776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr14:12954323-12954538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 117
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr14:36289739-36289954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr14:35018692-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:33247368-33247578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 137
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:36166997-36166782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr14:20234132-20234351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr14:40754186-40754403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 114
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr14:21357616-21357392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr14:12244323-12244562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 228
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr14:42330415-42330188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr14:44084429-44084639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 142
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr14:10078327-10078183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr14:15054932-15055077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr14:16457576-16457434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr14:1646127-1646325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr14:10693198-10693411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr14:2038749-2038942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr14:40191644-40191443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr14:4848406-4848193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr14:16524532-16524312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr14:20110663-20110879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr14:33329020-33328791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr14:16256825-16256595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr14:19827421-19827656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr14:9020084-9019853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr14:25225787-25225532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 188
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr14:27364633-27364418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr14:23682320-23682037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr14:25903586-25903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr14:33714623-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr14:20640575-20640809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr14:48427125-48426925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr14:11567459-11567261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
167, 109
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr14:16549949-16550147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 161
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr14:19487349-19487160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
115, 125
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr14:24945437-24945647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr14:1431778-1431976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr14:11729056-11729264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
10-214
               

               
Cow position:
               
chr14:39918693-39918897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
177, 128
               

               
Conread position:
               
10-215
               

               
Cow position:
               
chr14:18345678-18345885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 46
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr14:20826544-20826328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 91
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr14:49824568-49824776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr14:48838649-48838425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr14:13846039-13845823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr14:29734310-29734543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 157
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr14:19189096-19188887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
12-213
               

               
Cow position:
               
chr14:22989085-22988877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chr14:48772955-48772772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr14:9308115-9307914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr14:21224689-21224485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr14:33791238-33791035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr14:36775700-36775505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr14:41210905-41210701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr14:44713470-44713252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr14:20245118-20245335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr14:41837821-41838027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 124
               

               
Conread position:
               
13-240
               

               
Cow position:
               
chr14:109439-109663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 112
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr14:31177236-31177469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr14:13042805-13042596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr14:36254648-36254838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 128
               

               
Conread position:
               
16-212
               

               
Cow position:
               
chr14:47170306-47170507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr14:7127906-7127702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr14:9510590-9510387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr14:10852078-10851869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
16-216
               

               
Cow position:
               
chr14:45677277-45677070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr14:15997717-15997915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
167, 109
               

               
Conread position:
               
16-219
               

               
Cow position:
               
chr14:15211974-15211769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
16-227
               

               
Cow position:
               
chr14:18559013-18559229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 101
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr14:25228188-25227998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
22-213
               

               
Cow position:
               
chr14:40347604-40347800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chr14:50519139-50519335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr14:15492632-15492433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr14:19355329-19355134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
26-215
               

               
Cow position:
               
chr14:41749721-41749916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr14:35651748-35651937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr14:23419835-23419634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr14:24785694-24785506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
28-213
               

               
Cow position:
               
chr14:18412555-18412752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr14:13385404-13385202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr14:27823468-27823268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
29-218
               

               
Cow position:
               
chr14:18270396-18270196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr14:18112561-18112744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
31-211
               

               
Cow position:
               
chr14:20736644-20736458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr14:41156691-41156877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr14:12924324-12924177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr14:41623344-41623152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr14:8036350-8036146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
39-212
               

               
Cow position:
               
chr14:3194893-3194716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr14:8949674-8949493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr14:11079477-11079296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr14:5668093-5668302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 193
               

               
Conread position:
               
39-241
               

               
Cow position:
               
chr14:37151915-37152120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
45-218
               

               
Cow position:
               
chr14:21592985-21593165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
45-226
               

               
Cow position:
               
chr14:10706895-10706708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 165
               

               
Conread position:
               
47-214
               

               
Cow position:
               
chr14:41267715-41267882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
137, 88
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr14:27847367-27847193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
51-287
               

               
Cow position:
               
chr14:33618316-33618075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
60-204
               

               
Cow position:
               
chr14:7959791-7959649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
60-228
               

               
Cow position:
               
chr14:36151329-36151152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
60-236
               

               
Cow position:
               
chr14:12961594-12961416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
61-208
               

               
Cow position:
               
chr14:40806608-40806751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
61-210
               

               
Cow position:
               
chr14:19633231-19633090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr14:445290-445140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr14:25912654-25912497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr14:27609174-27609020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
61-214
               

               
Cow position:
               
chr14:38747681-38747520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-224
               

               
Cow position:
               
chr14:32784112-32784287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
61-227
               

               
Cow position:
               
chr14:15228543-15228375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr14:49501003-49501194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
62-204
               

               
Cow position:
               
chr14:24845970-24845830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
62-239
               

               
Cow position:
               
chr14:8707554-8707369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
63-211
               

               
Cow position:
               
chr14:11604883-11604728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
64-200
               

               
Cow position:
               
chr14:11280113-11280258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
64-214
               

               
Cow position:
               
chr14:11643249-11643405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
65-211
               

               
Cow position:
               
chr14:48745376-48745524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
65-212
               

               
Cow position:
               
chr14:21530074-21530240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
67-215
               

               
Cow position:
               
chr14:12138014-12137856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
68-213
               

               
Cow position:
               
chr14:10721710-10721860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
68-231
               

               
Cow position:
               
chr14:21968513-21968685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
69-199
               

               
Cow position:
               
chr14:25381425-25381296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
69-240
               

               
Cow position:
               
chr14:20667013-20667191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
72-221
               

               
Cow position:
               
chr14:2712030-2712172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
73-222
               

               
Cow position:
               
chr14:2853141-2852983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
73-235
               

               
Cow position:
               
chr14:5044662-5044497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
75-211
               

               
Cow position:
               
chr14:39770238-39770377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
76-212
               

               
Cow position:
               
chr14:49555221-49555354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
78-209
               

               
Cow position:
               
chr14:42917895-42917764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
78-214
               

               
Cow position:
               
chr14:21427240-21427379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
82-218
               

               
Cow position:
               
chr14:25890077-25889931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
83-212
               

               
Cow position:
               
chr14:12546575-12546712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
85-244
               

               
Cow position:
               
chr14:42633332-42633176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
86-213
               

               
Cow position:
               
chr14:8688541-8688673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
87-214
               

               
Cow position:
               
chr14:12141937-12142075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
94-225
               

               
Cow position:
               
chr14:42513457-42513587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 54
               
Show alignments to all cow chromosomes.