Cow genome map

Conread name: Lng1-LNG010084D12

Conread position: 1-144
Cow position: chr3:56704366-56704222 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 1-145
Cow position: chr3:23667575-23667720 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-145
Cow position: chr3:70401852-70401996 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 56

Conread position: 1-147
Cow position: chr3:57624419-57624566 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 1-148
Cow position: chr3:21997833-21997685 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr3:10103996-10104144 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 67

Conread position: 1-149
Cow position: chr3:12711960-12711811 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1-149
Cow position: chr3:24935320-24935468 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chr3:67704501-67704650 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 1-155
Cow position: chr3:66292221-66292066 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 1-165
Cow position: chr3:10026730-10026575 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-165
Cow position: chr3:73709002-73709172 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 1-168
Cow position: chr3:58767218-58767388 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 1-170
Cow position: chr3:55984054-55984222 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 75

Conread position: 1-185
Cow position: chr3:74787386-74787571 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 129, 23

Conread position: 1-185
Cow position: chr3:84250587-84250404 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 64

Conread position: 1-189
Cow position: chr3:65413323-65413125 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 1-197
Cow position: chr3:39988280-39988092 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 23

Conread position: 1-198
Cow position: chr3:70334740-70334531 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 1-199
Cow position: chr3:7566462-7566259 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1-200
Cow position: chr3:53046704-53046495 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 34

Conread position: 1-200
Cow position: chr3:73820413-73820202 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 18

Conread position: 1-204
Cow position: chr3:73299036-73299232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 1-207
Cow position: chr3:10668924-10668709 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 110, 58

Conread position: 1-208
Cow position: chr3:3889612-3889406 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 18

Conread position: 1-208
Cow position: chr3:14546957-14547170 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 94

Conread position: 1-208
Cow position: chr3:54739929-54739729 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 59

Conread position: 1-208
Cow position: chr3:60597499-60597708 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 58

Conread position: 1-208
Cow position: chr3:64010854-64010637 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 18

Conread position: 1-210
Cow position: chr3:59040524-59040743 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 139, 127

Conread position: 1-210
Cow position: chr3:65236979-65237196 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 122, 0

Conread position: 1-210
Cow position: chr3:77271322-77271114 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 67

Conread position: 1-211
Cow position: chr3:4319666-4319893 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 1-211
Cow position: chr3:8349610-8349397 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 175

Conread position: 1-212
Cow position: chr3:9663217-9662994 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 1-212
Cow position: chr3:11281721-11281944 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 1-212
Cow position: chr3:27274486-27274702 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 66

Conread position: 1-212
Cow position: chr3:28908248-28908041 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 184, 124

Conread position: 1-212
Cow position: chr3:29946342-29946561 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 212

Conread position: 1-212
Cow position: chr3:53084033-53083810 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 77, 215

Conread position: 1-212
Cow position: chr3:53910064-53910281 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 36

Conread position: 1-212
Cow position: chr3:56476637-56476849 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 120, 138

Conread position: 1-212
Cow position: chr3:56949133-56948921 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 1-212
Cow position: chr3:68303271-68303493 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 44

Conread position: 1-212
Cow position: chr3:71423596-71423394 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 57

Conread position: 1-212
Cow position: chr3:73335239-73335454 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 128, 110

Conread position: 1-212
Cow position: chr3:73395072-73395290 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 37

Conread position: 1-213
Cow position: chr3:2393007-2392793 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 47

Conread position: 1-213
Cow position: chr3:2648555-2648332 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 137, 0

Conread position: 1-213
Cow position: chr3:5365632-5365841 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 182, 136

Conread position: 1-213
Cow position: chr3:5374287-5374485 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 186, 61

Conread position: 1-213
Cow position: chr3:8393305-8393515 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 58

Conread position: 1-213
Cow position: chr3:14465751-14465539 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-213
Cow position: chr3:18686861-18687077 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 0

Conread position: 1-213
Cow position: chr3:19792860-19793073 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 93

Conread position: 1-213
Cow position: chr3:22221283-22221502 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 55

Conread position: 1-213
Cow position: chr3:23105407-23105189 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 1-213
Cow position: chr3:24468426-24468208 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 42

Conread position: 1-213
Cow position: chr3:29360191-29359988 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 56

Conread position: 1-213
Cow position: chr3:39248069-39247856 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 164

Conread position: 1-213
Cow position: chr3:45881853-45882075 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 123, 0

Conread position: 1-213
Cow position: chr3:48252840-48253055 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 139

Conread position: 1-213
Cow position: chr3:50768634-50768855 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 1-213
Cow position: chr3:53904412-53904611 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 1-213
Cow position: chr3:65058655-65058875 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 40

Conread position: 1-213
Cow position: chr3:76268020-76267797 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 1-213
Cow position: chr3:77582064-77582282 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 123, 57

Conread position: 1-213
Cow position: chr3:80740522-80740729 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 30

Conread position: 1-213
Cow position: chr3:82366084-82366305 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 25

Conread position: 1-214
Cow position: chr3:15228868-15228664 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 138

Conread position: 1-214
Cow position: chr3:18393439-18393223 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 64

Conread position: 1-214
Cow position: chr3:23920474-23920249 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 1-214
Cow position: chr3:31309399-31309177 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 1-214
Cow position: chr3:33252934-33252715 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1-214
Cow position: chr3:39996936-39996717 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 210

Conread position: 1-214
Cow position: chr3:55010206-55009995 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 33

Conread position: 1-214
Cow position: chr3:75173625-75173423 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 1-215
Cow position: chr3:14598904-14599098 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 24

Conread position: 1-216
Cow position: chr3:15751757-15751544 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 135, 23

Conread position: 1-217
Cow position: chr3:11715953-11716159 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 7

Conread position: 1-218
Cow position: chr3:210274-210504 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 1-218
Cow position: chr3:3985282-3985498 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 53

Conread position: 1-218
Cow position: chr3:8061084-8061301 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 57

Conread position: 1-218
Cow position: chr3:11229410-11229189 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 124, 0

Conread position: 1-218
Cow position: chr3:14601756-14601530 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 190

Conread position: 1-218
Cow position: chr3:25477761-25477973 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 57

Conread position: 1-218
Cow position: chr3:26904065-26904280 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 55

Conread position: 1-218
Cow position: chr3:60389719-60389933 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 165, 120

Conread position: 1-218
Cow position: chr3:64280976-64280758 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 43, 129

Conread position: 1-218
Cow position: chr3:68586978-68587201 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 56

Conread position: 1-218
Cow position: chr3:71231351-71231579 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 65

Conread position: 1-218
Cow position: chr3:73764239-73764034 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 182, 38

Conread position: 1-222
Cow position: chr3:20841918-20841694 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 136

Conread position: 1-222
Cow position: chr3:23203276-23203045 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 93

Conread position: 1-222
Cow position: chr3:40213078-40212850 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 28

Conread position: 1-222
Cow position: chr3:48900377-48900144 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 52

Conread position: 1-224
Cow position: chr3:15051993-15051764 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 58

Conread position: 1-224
Cow position: chr3:59474077-59474306 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 221

Conread position: 1-225
Cow position: chr3:65969122-65969362 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 1-228
Cow position: chr3:2506525-2506285 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 89

Conread position: 1-229
Cow position: chr3:30180040-30180276 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 27, 117

Conread position: 1-229
Cow position: chr3:75050662-75050429 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 71

Conread position: 1-232
Cow position: chr3:71238109-71238344 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 74

Conread position: 1-233
Cow position: chr3:75158317-75158553 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 9

Conread position: 1-234
Cow position: chr3:55318945-55318699 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 113

Conread position: 1-235
Cow position: chr3:27976569-27976325 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 116, 161

Conread position: 1-236
Cow position: chr3:81234344-81234586 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 229

Conread position: 1-237
Cow position: chr3:52652126-52651880 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 235

Conread position: 1-237
Cow position: chr3:53739230-53738996 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 171, 126

Conread position: 1-238
Cow position: chr3:3656469-3656718 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 1-238
Cow position: chr3:10591560-10591315 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 147

Conread position: 1-238
Cow position: chr3:52456873-52457115 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 124, 41

Conread position: 1-238
Cow position: chr3:69785670-69785420 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 241

Conread position: 1-238
Cow position: chr3:72342200-72342450 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 9

Conread position: 1-239
Cow position: chr3:69650934-69650697 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 124, 182

Conread position: 1-239
Cow position: chr3:81087681-81087439 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 43

Conread position: 1-240
Cow position: chr3:48241574-48241813 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 147, 18

Conread position: 1-241
Cow position: chr3:18059657-18059908 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 50, 228

Conread position: 1-241
Cow position: chr3:55970462-55970718 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 232

Conread position: 1-241
Cow position: chr3:83491041-83491283 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 122, 85

Conread position: 1-242
Cow position: chr3:83215217-83215473 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 124, 242

Conread position: 1-245
Cow position: chr3:55712395-55712640 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 167

Conread position: 1-253
Cow position: chr3:77365335-77365077 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 195

Conread position: 1-273
Cow position: chr3:5040352-5040067 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 122, 60

Conread position: 2-133
Cow position: chr3:11292292-11292160 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 2-165
Cow position: chr3:20515862-20515698 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 2-210
Cow position: chr3:83988489-83988707 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 86

Conread position: 2-212
Cow position: chr3:48459373-48459154 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 2-214
Cow position: chr3:35074837-35075049 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 184, 17

Conread position: 2-216
Cow position: chr3:1517556-1517334 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 181

Conread position: 2-220
Cow position: chr3:7661812-7662040 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 37

Conread position: 2-221
Cow position: chr3:51234138-51233916 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 43

Conread position: 2-221
Cow position: chr3:54434933-54435154 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 35

Conread position: 2-224
Cow position: chr3:55819714-55819936 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 130

Conread position: 2-227
Cow position: chr3:15973522-15973761 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 3-149
Cow position: chr3:32457151-32457297 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 105

Conread position: 3-150
Cow position: chr3:24371878-24372026 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 62

Conread position: 3-205
Cow position: chr3:75238414-75238628 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 3-213
Cow position: chr3:15153648-15153864 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 3-213
Cow position: chr3:15443771-15443550 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 38

Conread position: 3-218
Cow position: chr3:70334008-70333788 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 3-237
Cow position: chr3:58527345-58527577 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 23

Conread position: 3-241
Cow position: chr3:79272616-79272369 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 3-246
Cow position: chr3:40100760-40100523 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 183, 124

Conread position: 4-117
Cow position: chr3:23444931-23444817 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 4-207
Cow position: chr3:55124322-55124115 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 107

Conread position: 4-213
Cow position: chr3:19711381-19711161 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 78

Conread position: 4-213
Cow position: chr3:54905576-54905782 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 180, 57

Conread position: 4-213
Cow position: chr3:73467589-73467802 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 57

Conread position: 4-218
Cow position: chr3:35624586-35624361 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 6

Conread position: 4-226
Cow position: chr3:29887463-29887251 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 32

Conread position: 5-188
Cow position: chr3:16505516-16505336 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 56

Conread position: 5-188
Cow position: chr3:32585109-32585293 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 5-200
Cow position: chr3:60265292-60265099 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 119, 54

Conread position: 5-200
Cow position: chr3:74079677-74079475 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 120, 65

Conread position: 5-206
Cow position: chr3:17222183-17221964 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 5-207
Cow position: chr3:45647639-45647836 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 178, 122

Conread position: 5-207
Cow position: chr3:80053582-80053382 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 5-208
Cow position: chr3:70896003-70896210 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 126

Conread position: 5-210
Cow position: chr3:10958281-10958071 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 5-210
Cow position: chr3:59299533-59299746 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 5-210
Cow position: chr3:78093430-78093220 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 120, 163

Conread position: 5-210
Cow position: chr3:82019880-82019669 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 5-212
Cow position: chr3:6182262-6182058 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 120, 47

Conread position: 5-212
Cow position: chr3:15158990-15159204 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 46

Conread position: 5-212
Cow position: chr3:48363035-48363244 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 53

Conread position: 5-212
Cow position: chr3:53221971-53222187 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 5-212
Cow position: chr3:60264757-60264547 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 120, 193

Conread position: 5-212
Cow position: chr3:68708049-68707847 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 179, 47

Conread position: 5-212
Cow position: chr3:80564926-80565127 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 120, 14

Conread position: 5-213
Cow position: chr3:31804807-31804594 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 110

Conread position: 5-214
Cow position: chr3:15950954-15950740 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 142, 114

Conread position: 5-215
Cow position: chr3:47753185-47753415 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 5-217
Cow position: chr3:4548986-4549196 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 170

Conread position: 5-217
Cow position: chr3:79094082-79093877 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 14

Conread position: 5-218
Cow position: chr3:5305757-5305984 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 120, 193

Conread position: 5-218
Cow position: chr3:16752299-16752073 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 56

Conread position: 5-230
Cow position: chr3:9641526-9641747 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 123

Conread position: 5-233
Cow position: chr3:39969904-39969667 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 5-237
Cow position: chr3:75080722-75080954 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 87

Conread position: 5-242
Cow position: chr3:22165456-22165209 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 120, 56

Conread position: 6-147
Cow position: chr3:44330477-44330335 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 6-213
Cow position: chr3:10732850-10733054 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 114

Conread position: 6-218
Cow position: chr3:49482757-49482532 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 7-146
Cow position: chr3:74134665-74134805 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 7-212
Cow position: chr3:48072921-48072711 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 7-215
Cow position: chr3:7337821-7337607 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 118, 77

Conread position: 7-221
Cow position: chr3:84212569-84212355 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 17

Conread position: 8-214
Cow position: chr3:33002348-33002562 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 56

Conread position: 8-237
Cow position: chr3:54067753-54067997 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 236

Conread position: 9-211
Cow position: chr3:49327907-49328108 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 175, 127

Conread position: 9-212
Cow position: chr3:71474441-71474232 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 9-218
Cow position: chr3:48468136-48468358 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 10-147
Cow position: chr3:64648456-64648594 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 10-148
Cow position: chr3:74802102-74801963 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 10-198
Cow position: chr3:18607634-18607824 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 127

Conread position: 10-211
Cow position: chr3:68156686-68156901 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 10-212
Cow position: chr3:7331159-7330963 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 49

Conread position: 10-212
Cow position: chr3:55177782-55177576 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 0

Conread position: 10-212
Cow position: chr3:70762156-70761948 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 44

Conread position: 10-212
Cow position: chr3:74584172-74584365 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 176, 99

Conread position: 10-213
Cow position: chr3:54506671-54506882 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 115, 0

Conread position: 10-214
Cow position: chr3:78092547-78092334 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 94

Conread position: 10-218
Cow position: chr3:31350140-31349928 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 38

Conread position: 10-218
Cow position: chr3:68004738-68004529 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 115, 193

Conread position: 10-219
Cow position: chr3:64196790-64197008 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 10-222
Cow position: chr3:52608146-52608358 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 115, 186

Conread position: 10-233
Cow position: chr3:4461520-4461293 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 26

Conread position: 10-233
Cow position: chr3:82629280-82629503 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 191

Conread position: 10-240
Cow position: chr3:71703442-71703661 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 204, 49

Conread position: 11-207
Cow position: chr3:18001163-18001356 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 128

Conread position: 11-214
Cow position: chr3:38828725-38828928 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 129, 8

Conread position: 11-236
Cow position: chr3:75107739-75107972 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 226

Conread position: 11-237
Cow position: chr3:48483144-48483381 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 9

Conread position: 11-243
Cow position: chr3:24596458-24596229 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 166

Conread position: 12-212
Cow position: chr3:59610751-59610544 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 15

Conread position: 13-138
Cow position: chr3:26219084-26218960 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 13-149
Cow position: chr3:3316848-3316712 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 125, 60

Conread position: 13-166
Cow position: chr3:20677872-20677723 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 46

Conread position: 13-208
Cow position: chr3:54982111-54981920 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 7

Conread position: 13-208
Cow position: chr3:74533316-74533505 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 106

Conread position: 13-212
Cow position: chr3:59604813-59605017 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 112, 46

Conread position: 13-213
Cow position: chr3:54946099-54946297 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 112, 9

Conread position: 13-214
Cow position: chr3:23132201-23131991 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 7

Conread position: 13-215
Cow position: chr3:3556512-3556727 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 13-223
Cow position: chr3:57274027-57274245 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 39

Conread position: 13-235
Cow position: chr3:22924408-22924182 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 13-240
Cow position: chr3:74754294-74754517 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 171, 7

Conread position: 13-255
Cow position: chr3:61224776-61224534 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 7

Conread position: 14-146
Cow position: chr3:28556196-28556061 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 14-170
Cow position: chr3:82123579-82123420 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 14-210
Cow position: chr3:49363078-49363280 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 108, 10

Conread position: 14-213
Cow position: chr3:53790568-53790366 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 47

Conread position: 16-185
Cow position: chr3:35238983-35239156 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 87

Conread position: 16-201
Cow position: chr3:77276488-77276301 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 109, 52

Conread position: 16-208
Cow position: chr3:26970783-26970982 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 163

Conread position: 16-209
Cow position: chr3:20021239-20021440 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 16-211
Cow position: chr3:74234156-74234355 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 179

Conread position: 16-212
Cow position: chr3:9120815-9121017 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 43

Conread position: 16-212
Cow position: chr3:17936869-17936672 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 168, 105

Conread position: 16-212
Cow position: chr3:28902789-28902587 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 101

Conread position: 16-212
Cow position: chr3:76269862-76270063 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 78

Conread position: 16-213
Cow position: chr3:18459558-18459361 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 101

Conread position: 16-213
Cow position: chr3:58765105-58764910 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 170, 111

Conread position: 16-214
Cow position: chr3:55189784-55189573 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 16-215
Cow position: chr3:38864095-38864297 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 125

Conread position: 16-215
Cow position: chr3:79196729-79196941 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 16-218
Cow position: chr3:67744658-67744459 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 121

Conread position: 16-231
Cow position: chr3:23169093-23168875 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 15

Conread position: 17-208
Cow position: chr3:17058575-17058376 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 17-212
Cow position: chr3:3947009-3947211 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 17-215
Cow position: chr3:44961034-44960840 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 122

Conread position: 17-218
Cow position: chr3:78071821-78071611 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 93

Conread position: 17-238
Cow position: chr3:84137844-84137611 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 18-152
Cow position: chr3:55272073-55271938 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 18-211
Cow position: chr3:15160492-15160691 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 0

Conread position: 18-212
Cow position: chr3:67407394-67407192 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 19-217
Cow position: chr3:46559742-46559536 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 19-220
Cow position: chr3:16333770-16333988 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 19-241
Cow position: chr3:18831394-18831623 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 126

Conread position: 20-209
Cow position: chr3:29188622-29188421 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 20-212
Cow position: chr3:76056311-76056113 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 21-210
Cow position: chr3:76922688-76922500 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 160, 104

Conread position: 22-213
Cow position: chr3:75966805-75966606 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 37

Conread position: 22-218
Cow position: chr3:27246983-27246786 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 115

Conread position: 26-211
Cow position: chr3:3883835-3883646 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 73

Conread position: 26-212
Cow position: chr3:19788850-19788665 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 165

Conread position: 26-212
Cow position: chr3:36418500-36418312 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 20

Conread position: 26-212
Cow position: chr3:73701484-73701673 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 47, 17

Conread position: 26-214
Cow position: chr3:19585844-19586041 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 38

Conread position: 26-215
Cow position: chr3:31115290-31115100 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 160, 101

Conread position: 26-215
Cow position: chr3:59681924-59681729 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 26-218
Cow position: chr3:54557654-54557847 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 116

Conread position: 26-232
Cow position: chr3:51150108-51150326 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 26-236
Cow position: chr3:73589791-73589564 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 27-208
Cow position: chr3:72412-72591 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 16

Conread position: 27-213
Cow position: chr3:14552856-14553048 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 27-214
Cow position: chr3:985995-986192 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 98, 84

Conread position: 27-214
Cow position: chr3:53604765-53604567 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 27-218
Cow position: chr3:8526383-8526198 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 27-231
Cow position: chr3:75853347-75853142 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 78

Conread position: 27-241
Cow position: chr3:70402625-70402842 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 98, 53

Conread position: 27-242
Cow position: chr3:50350988-50350772 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 96

Conread position: 28-203
Cow position: chr3:62312778-62312964 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 44

Conread position: 28-203
Cow position: chr3:62370037-62370223 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 44

Conread position: 28-212
Cow position: chr3:29234700-29234503 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 28-222
Cow position: chr3:18700129-18699922 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 29-212
Cow position: chr3:22868737-22868541 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 29-215
Cow position: chr3:61024040-61023843 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 187

Conread position: 29-240
Cow position: chr3:25038009-25037798 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 96

Conread position: 31-222
Cow position: chr3:83455166-83454972 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 63

Conread position: 32-221
Cow position: chr3:59597164-59597357 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 33-218
Cow position: chr3:59317689-59317882 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 71

Conread position: 34-218
Cow position: chr3:17531750-17531555 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 35-242
Cow position: chr3:30940796-30941008 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 38

Conread position: 37-208
Cow position: chr3:81401106-81400935 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 145, 57

Conread position: 37-213
Cow position: chr3:23640334-23640515 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 37-214
Cow position: chr3:43389137-43388948 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 38-207
Cow position: chr3:3401539-3401711 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 89

Conread position: 38-208
Cow position: chr3:4518192-4518013 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 38-208
Cow position: chr3:53150323-53150504 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 38-211
Cow position: chr3:23753482-23753658 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 36

Conread position: 38-212
Cow position: chr3:19709102-19709280 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 38-212
Cow position: chr3:23818483-23818662 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 38-213
Cow position: chr3:76155979-76156162 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 38-242
Cow position: chr3:56943934-56943726 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 177

Conread position: 39-214
Cow position: chr3:5900114-5900288 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 88

Conread position: 39-214
Cow position: chr3:55730476-55730289 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 39-215
Cow position: chr3:2016428-2016610 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 39-218
Cow position: chr3:31361418-31361604 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 39-241
Cow position: chr3:3164117-3163911 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 131

Conread position: 39-242
Cow position: chr3:83934718-83934926 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 197

Conread position: 39-243
Cow position: chr3:57704329-57704537 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 31

Conread position: 39-244
Cow position: chr3:15859386-15859173 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 72

Conread position: 41-215
Cow position: chr3:29813222-29813404 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 115

Conread position: 45-213
Cow position: chr3:49344692-49344868 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 45-250
Cow position: chr3:53428918-53428705 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 182

Conread position: 47-213
Cow position: chr3:70333220-70333053 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 21

Conread position: 48-214
Cow position: chr3:64910094-64909918 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 50-218
Cow position: chr3:22094595-22094432 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 75

Conread position: 50-218
Cow position: chr3:84807324-84807144 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 51-243
Cow position: chr3:22232649-22232461 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 133, 78

Conread position: 52-218
Cow position: chr3:44782345-44782519 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 52-238
Cow position: chr3:68565827-68566011 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 39

Conread position: 59-233
Cow position: chr3:26681801-26681623 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 118

Conread position: 60-213
Cow position: chr3:19611338-19611177 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 61-185
Cow position: chr3:5737766-5737891 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 28

Conread position: 61-202
Cow position: chr3:68624232-68624384 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 61-207
Cow position: chr3:22676095-22675937 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 61-210
Cow position: chr3:68616315-68616162 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 61-212
Cow position: chr3:24774668-24774817 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 57

Conread position: 61-212
Cow position: chr3:75480015-75480173 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 11

Conread position: 61-213
Cow position: chr3:2630789-2630936 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 61-213
Cow position: chr3:23037494-23037332 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 114

Conread position: 61-213
Cow position: chr3:24872719-24872868 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 61-213
Cow position: chr3:37641341-37641502 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 61-213
Cow position: chr3:43896045-43895887 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 61-213
Cow position: chr3:49787573-49787732 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 61-214
Cow position: chr3:77098808-77098647 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 61-215
Cow position: chr3:23408343-23408186 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 61-215
Cow position: chr3:66885015-66884852 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 61-217
Cow position: chr3:52845571-52845736 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 61-218
Cow position: chr3:14211968-14211804 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 61-218
Cow position: chr3:17331737-17331900 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 104

Conread position: 61-218
Cow position: chr3:23804520-23804683 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 61-218
Cow position: chr3:57641815-57641984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 16

Conread position: 61-221
Cow position: chr3:40958112-40957944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 103

Conread position: 61-228
Cow position: chr3:77653942-77654112 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 75

Conread position: 61-237
Cow position: chr3:11607837-11608018 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 87, 24

Conread position: 61-240
Cow position: chr3:10372283-10372460 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 91

Conread position: 62-233
Cow position: chr3:51402916-51403092 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 71

Conread position: 63-252
Cow position: chr3:44218782-44218980 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 169

Conread position: 64-212
Cow position: chr3:8523136-8522979 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 43

Conread position: 64-212
Cow position: chr3:26977552-26977712 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 65-212
Cow position: chr3:2636968-2637120 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 115

Conread position: 65-212
Cow position: chr3:26393281-26393124 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 65-212
Cow position: chr3:59635331-59635478 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 62

Conread position: 65-215
Cow position: chr3:74050683-74050529 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 149

Conread position: 65-218
Cow position: chr3:49789564-49789416 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 119, 60

Conread position: 66-199
Cow position: chr3:6579505-6579642 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 28

Conread position: 66-213
Cow position: chr3:16107347-16107199 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 66-242
Cow position: chr3:621454-621647 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 66-243
Cow position: chr3:14801764-14801951 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 161

Conread position: 67-213
Cow position: chr3:22078096-22078254 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 67-251
Cow position: chr3:22903732-22903544 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 166

Conread position: 68-213
Cow position: chr3:16867845-16867999 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 41

Conread position: 69-207
Cow position: chr3:74500284-74500427 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 72-212
Cow position: chr3:75907937-75908086 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 76-166
Cow position: chr3:58691131-58691040 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 76-213
Cow position: chr3:13329756-13329617 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 60

Conread position: 76-213
Cow position: chr3:26759899-26760033 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 43

Conread position: 76-217
Cow position: chr3:61211427-61211287 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 68

Conread position: 76-241
Cow position: chr3:8540537-8540707 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 77-208
Cow position: chr3:83921357-83921487 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 34

Conread position: 79-212
Cow position: chr3:24370434-24370566 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 117
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 59

Conread position: 82-218
Cow position: chr3:53249524-53249666 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 83-212
Cow position: chr3:39967452-39967321 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 88-213
Cow position: chr3:21081344-21081204 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 95-237
Cow position: chr3:14000502-14000357 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 112

Show alignments to all cow chromosomes.