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Cow genome map

           
Conread name:
           
Lng1-LNG010084D12
        

               
Conread position:
               
1-139
               

               
Cow position:
               
chr4:3850523-3850662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr4:69543154-69543299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:11380255-11380399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:36893331-36893479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr4:51920516-51920664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr4:12135955-12135806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr4:19098441-19098593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr4:44782347-44782495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr4:54191062-54191210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr4:59377881-59378030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:45074035-45074206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:25888859-25888686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr4:61188897-61188705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:54171598-54171802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr4:45775366-45775151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr4:14500272-14500065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr4:29805398-29805186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr4:43740506-43740714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 130
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr4:34983524-34983319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr4:40414656-40414441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:508937-508725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 185
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:14020472-14020686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:19102909-19102689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:19501120-19500901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 176
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:59785294-59785507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:62370288-62370496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
139, 116
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:9444715-9444492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:25226921-25227124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
186, 67
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:43542499-43542292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:20147155-20147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:33181516-33181735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
116, 188
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:34630870-34631098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:38157116-38156902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 150
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:56570778-56570982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 135
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr4:60363322-60363542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:203171-202951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:19430337-19430552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 190
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:23451123-23450898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:29291488-29291698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
179, 43
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:45077105-45076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:46136722-46136941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:46883701-46883475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:66547796-66547571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:10968415-10968204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:12127667-12127446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:19578362-19578576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:26959997-26959773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:37935313-37935109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 136
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:38822344-38822125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:50687889-50687672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:66256658-66256872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 117
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:961681-961470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:15905072-15905303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:19408025-19407795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:31348214-31348004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
124, 103
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr4:58248377-58248601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:12591242-12591023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 181
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:16881393-16881176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:19292693-19292912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
189, 114
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:19316033-19315810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:22138250-22138019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:27632419-27632639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:34383369-34383145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:34641754-34641526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 108
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:45636138-45636368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 228
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:3268391-3268173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:4084478-4084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:12004190-12004414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:29384260-29384037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:35638931-35638703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 219
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:49794638-49794854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:13668650-13668413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:38210003-38209770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr4:45583147-45582913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr4:52748482-52748253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:19199315-19199071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr4:1985619-1985862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 231
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:48104597-48104351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:47305049-47305297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:3388516-3388756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:42232051-42231817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:45706015-45706253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:32693759-32694007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:22101293-22101042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:44773071-44772823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 198
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:49800666-49800912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:7698238-7698487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:18756406-18756658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 235
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:28836508-28836752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 103
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:53126086-53126318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:45724840-45725088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr4:51769080-51769340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
2-140
               

               
Cow position:
               
chr4:50676197-50676061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr4:46476977-46476784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr4:13590056-13590273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr4:46494267-46494488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr4:46560153-46560368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr4:21161078-21161296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr4:37313143-37313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr4:20124995-20124774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr4:56239887-56239667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr4:24371888-24371656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr4:19539264-19539017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 207
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr4:36929289-36929511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr4:23509570-23509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr4:10732197-10732403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
139, 190
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr4:25370086-25370281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr4:45626653-45626449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
122, 99
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr4:47038741-47038961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr4:3837248-3837476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr4:32561803-32562043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 224
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:45213216-45212966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr4:40995705-40995929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr4:12676778-12676995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
5-148
               

               
Cow position:
               
chr4:65131477-65131334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr4:36744556-36744699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr4:63965012-63964826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:35981972-35982188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:44854314-44854097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:47730834-47731054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr4:62472055-62472266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 165
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr4:28701335-28701536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr4:46404928-46404720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr4:65463525-65463322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr4:22546865-22546651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr4:41370965-41370749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr4:5727820-5728024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:38944280-38944064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr4:19333362-19333580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr4:60141541-60141326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:46566495-46566266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr4:48152395-48152163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr4:28772091-28771857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 197
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr4:42423829-42423593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 210
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr4:36290600-36290838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 211
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr4:61608988-61608751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr4:22010077-22009875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr4:43916266-43916491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr4:61268169-61268380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 161
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr4:44903272-44903496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr4:16762747-16762525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 188
               

               
Conread position:
               
9-213
               

               
Cow position:
               
chr4:3687902-3688121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr4:51728057-51728273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr4:33096997-33096765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr4:58880980-58880841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-154
               

               
Cow position:
               
chr4:34503274-34503424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
10-154
               

               
Cow position:
               
chr4:54541657-54541513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 135
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr4:18951954-18952161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr4:52832035-52831828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr4:3283466-3283266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
10-210
               

               
Cow position:
               
chr4:48409287-48409096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr4:4319171-4318964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr4:33838819-33838613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr4:21506975-21506773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
174, 117
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr4:27530099-27530303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 171
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr4:53134577-53134788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr4:68590758-68590960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr4:68889580-68889388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr4:19597343-19597140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
115, 130
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr4:38935340-38935550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 97
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr4:60527161-60527373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 167
               

               
Conread position:
               
10-214
               

               
Cow position:
               
chr4:48485975-48486189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
10-215
               

               
Cow position:
               
chr4:21065018-21065220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
174, 10
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr4:10558517-10558733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr4:23600148-23600361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 172
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr4:67393072-67393292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr4:8182659-8182430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 221
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr4:20027122-20026895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr4:34653888-34653667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr4:23847068-23846843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr4:4085137-4084885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 228
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr4:5790627-5790839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
12-184
               

               
Cow position:
               
chr4:68387776-68387948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chr4:17851270-17851070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
112, 152
               

               
Conread position:
               
13-188
               

               
Cow position:
               
chr4:26901312-26901486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
13-208
               

               
Cow position:
               
chr4:34700046-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
13-210
               

               
Cow position:
               
chr4:17186365-17186159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
13-211
               

               
Cow position:
               
chr4:21531658-21531449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
13-212
               

               
Cow position:
               
chr4:214001-214201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
13-212
               

               
Cow position:
               
chr4:59002155-59001947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr4:61969745-61969538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 182
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr4:66172812-66172603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
13-214
               

               
Cow position:
               
chr4:386407-386201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
13-215
               

               
Cow position:
               
chr4:17774365-17774172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr4:18099077-18098864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr4:60719085-60719289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 138
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr4:13344522-13344735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
13-230
               

               
Cow position:
               
chr4:19431712-19431483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 211
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr4:8083814-8083616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
16-146
               

               
Cow position:
               
chr4:10851463-10851333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr4:44449519-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr4:60506263-60506454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr4:53208280-53208466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 122
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr4:69497102-69497296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
16-208
               

               
Cow position:
               
chr4:3421609-3421811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
16-208
               

               
Cow position:
               
chr4:19496481-19496687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr4:37915348-37915149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
16-210
               

               
Cow position:
               
chr4:41907595-41907393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr4:19435242-19435441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
109, 146
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr4:20327722-20327531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr4:26659286-26659492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr4:65173089-65173294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr4:68805999-68806195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
16-214
               

               
Cow position:
               
chr4:34310466-34310272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
16-214
               

               
Cow position:
               
chr4:51851193-51851405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
16-217
               

               
Cow position:
               
chr4:19238206-19238414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr4:49212753-49212549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr4:61391240-61391019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
16-239
               

               
Cow position:
               
chr4:1026247-1026018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr4:19573271-19573507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 217
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr4:54455355-54455128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
158, 45
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr4:48422865-48423042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr4:85682-85885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr4:31177812-31178015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr4:39007495-39007719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr4:34022596-34022394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
18-220
               

               
Cow position:
               
chr4:3519410-3519618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
19-240
               

               
Cow position:
               
chr4:17790302-17790077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 203
               

               
Conread position:
               
20-213
               

               
Cow position:
               
chr4:32790012-32789824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
20-213
               

               
Cow position:
               
chr4:60955322-60955513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
20-243
               

               
Cow position:
               
chr4:69290752-69290521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 200
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr4:65825836-65825633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr4:58045640-58045416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
23-218
               

               
Cow position:
               
chr4:13141100-13140914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
26-179
               

               
Cow position:
               
chr4:54650488-54650329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr4:561629-561818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr4:11506786-11506602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr4:68233968-68234150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr4:24810452-24810260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr4:32601834-32602018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
26-217
               

               
Cow position:
               
chr4:37991589-37991784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr4:30769032-30769232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
27-210
               

               
Cow position:
               
chr4:55694174-55694359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
27-213
               

               
Cow position:
               
chr4:56410343-56410537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr4:7043823-7043624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr4:53347972-53347756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr4:44184115-44183934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 133
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr4:42374156-42373966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
29-214
               

               
Cow position:
               
chr4:5250187-5250384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
29-218
               

               
Cow position:
               
chr4:12867105-12867297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
30-213
               

               
Cow position:
               
chr4:19089892-19090079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
31-203
               

               
Cow position:
               
chr4:19122874-19123052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr4:29842829-29843006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr4:51083336-51083149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
33-212
               

               
Cow position:
               
chr4:33970893-33970714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
33-218
               

               
Cow position:
               
chr4:24356514-24356704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
33-222
               

               
Cow position:
               
chr4:25802694-25802896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr4:13508233-13508048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr4:30691012-30691193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
37-218
               

               
Cow position:
               
chr4:54785922-54785733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
37-223
               

               
Cow position:
               
chr4:20164685-20164495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
38-208
               

               
Cow position:
               
chr4:21275592-21275426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
38-218
               

               
Cow position:
               
chr4:3340961-3341150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 176
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr4:47048126-47048314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr4:49158784-49158600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
40-218
               

               
Cow position:
               
chr4:51617985-51617799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
40-236
               

               
Cow position:
               
chr4:479781-479584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 141
               

               
Conread position:
               
41-214
               

               
Cow position:
               
chr4:69458212-69458389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr4:36070717-36070886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
44-213
               

               
Cow position:
               
chr4:2770088-2770263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
45-210
               

               
Cow position:
               
chr4:27656993-27657161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
45-229
               

               
Cow position:
               
chr4:23646842-23646659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
47-211
               

               
Cow position:
               
chr4:61286562-61286727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
47-226
               

               
Cow position:
               
chr4:28660533-28660339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
47-233
               

               
Cow position:
               
chr4:14063266-14063085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr4:36876840-36876637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
49-210
               

               
Cow position:
               
chr4:43909781-43909954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
50-212
               

               
Cow position:
               
chr4:40392836-40393002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 96
               

               
Conread position:
               
50-218
               

               
Cow position:
               
chr4:45840419-45840589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
51-209
               

               
Cow position:
               
chr4:22215489-22215325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
51-239
               

               
Cow position:
               
chr4:19200134-19200324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
52-211
               

               
Cow position:
               
chr4:61524455-61524620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr4:13193987-13194170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr4:12908401-12908570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
59-233
               

               
Cow position:
               
chr4:12748383-12748209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
60-176
               

               
Cow position:
               
chr4:20115985-20115869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
60-232
               

               
Cow position:
               
chr4:19558716-19558878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
61-178
               

               
Cow position:
               
chr4:12720158-12720280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-204
               

               
Cow position:
               
chr4:4320959-4320810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-208
               

               
Cow position:
               
chr4:22331156-22331307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 127
               

               
Conread position:
               
61-208
               

               
Cow position:
               
chr4:28839649-28839797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
61-208
               

               
Cow position:
               
chr4:43579381-43579229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
61-210
               

               
Cow position:
               
chr4:66168300-66168149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr4:12713995-12713842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr4:12716864-12716712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr4:10410808-10410954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr4:19119049-19119210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:11099623-11099469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:22071640-22071480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:34919238-34919082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:44681220-44681068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:59015620-59015773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:59608153-59608004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chr4:66412218-66412375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-214
               

               
Cow position:
               
chr4:21128167-21128315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
61-214
               

               
Cow position:
               
chr4:56307834-56307995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
61-215
               

               
Cow position:
               
chr4:39569235-39569394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
61-218
               

               
Cow position:
               
chr4:59105651-59105488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-218
               

               
Cow position:
               
chr4:65291824-65291666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
61-219
               

               
Cow position:
               
chr4:31136787-31136953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
61-220
               

               
Cow position:
               
chr4:34562413-34562576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
61-235
               

               
Cow position:
               
chr4:52823370-52823188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
61-238
               

               
Cow position:
               
chr4:56513976-56513799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
62-208
               

               
Cow position:
               
chr4:59277447-59277287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
62-208
               

               
Cow position:
               
chr4:63293492-63293645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
64-217
               

               
Cow position:
               
chr4:30943989-30944149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
64-218
               

               
Cow position:
               
chr4:66509672-66509823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
64-225
               

               
Cow position:
               
chr4:61066800-61066956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
65-211
               

               
Cow position:
               
chr4:20153513-20153364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
65-213
               

               
Cow position:
               
chr4:27425747-27425901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
65-213
               

               
Cow position:
               
chr4:28854239-28854084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
65-213
               

               
Cow position:
               
chr4:51026385-51026543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
65-215
               

               
Cow position:
               
chr4:17051250-17051091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
65-219
               

               
Cow position:
               
chr4:12052293-12052139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
66-204
               

               
Cow position:
               
chr4:56805213-56805346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
66-208
               

               
Cow position:
               
chr4:48693635-48693782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
66-210
               

               
Cow position:
               
chr4:30250234-30250094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr4:348388-348239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
67-212
               

               
Cow position:
               
chr4:34509878-34510020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
67-213
               

               
Cow position:
               
chr4:56395550-56395708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr4:25929254-25929413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
68-200
               

               
Cow position:
               
chr4:48137982-48138123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
68-210
               

               
Cow position:
               
chr4:62821017-62820867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-200
               

               
Cow position:
               
chr4:52584034-52583898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
69-209
               

               
Cow position:
               
chr4:22482365-22482508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
69-212
               

               
Cow position:
               
chr4:19744915-19745061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
69-237
               

               
Cow position:
               
chr4:33360144-33360308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
73-214
               

               
Cow position:
               
chr4:42608782-42608932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
73-235
               

               
Cow position:
               
chr4:12920376-12920546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
76-198
               

               
Cow position:
               
chr4:60072698-60072575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
76-210
               

               
Cow position:
               
chr4:14964875-14965004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
76-213
               

               
Cow position:
               
chr4:19503975-19504114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
76-213
               

               
Cow position:
               
chr4:60302960-60302823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr4:49880646-49880497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
84-218
               

               
Cow position:
               
chr4:34544361-34544502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
86-261
               

               
Cow position:
               
chr4:57556543-57556718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
88-212
               

               
Cow position:
               
chr4:19328643-19328773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
88-227
               

               
Cow position:
               
chr4:29206591-29206731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 63
               
Show alignments to all cow chromosomes.