Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 290-753 |
| Cow position: | chr10:39179529-39180013 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 374 |
| Conread position: | 295-525 |
| Cow position: | chr10:10581424-10581655 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 295-653 |
| Cow position: | chr10:29846859-29846485 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-742 |
| Cow position: | chr10:8289721-8290201 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 203 |
| Conread position: | 295-742 |
| Cow position: | chr10:19511358-19511825 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 295-750 |
| Cow position: | chr10:22100992-22101459 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 193 |
| Conread position: | 295-753 |
| Cow position: | chr10:1375287-1375761 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 293 |
| Conread position: | 295-753 |
| Cow position: | chr10:19143587-19143108 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 269 |
| Conread position: | 295-753 |
| Cow position: | chr10:21486667-21487145 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 261 |
| Conread position: | 295-753 |
| Cow position: | chr10:37769573-37770051 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr10:38345612-38345132 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr10:39041554-39041072 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 297-753 |
| Cow position: | chr10:3543824-3543358 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 298-443 |
| Cow position: | chr10:50018301-50018159 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 298-656 |
| Cow position: | chr10:42747858-42748217 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 298-751 |
| Cow position: | chr10:276350-276817 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 298-751 |
| Cow position: | chr10:29633104-29632635 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 111 |
| Conread position: | 298-752 |
| Cow position: | chr10:41351990-41351531 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 298-753 |
| Cow position: | chr10:62778099-62778577 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 300-525 |
| Cow position: | chr10:61297087-61297309 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 120, 135 |
| Conread position: | 300-751 |
| Cow position: | chr10:24299090-24298626 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 300-751 |
| Cow position: | chr10:38546466-38545997 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 245 |
| Conread position: | 301-716 |
| Cow position: | chr10:24978371-24977950 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 301-749 |
| Cow position: | chr10:51952845-51952392 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 301-751 |
| Cow position: | chr10:4192456-4192005 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 301-753 |
| Cow position: | chr10:280863-280391 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr10:11685902-11685441 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 301-753 |
| Cow position: | chr10:14803592-14804066 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 322 |
| Conread position: | 301-753 |
| Cow position: | chr10:21740992-21740522 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 301-753 |
| Cow position: | chr10:32578060-32578519 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 201 |
| Conread position: | 301-753 |
| Cow position: | chr10:41566865-41567333 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 301-753 |
| Cow position: | chr10:41876674-41877148 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr10:47906537-47907008 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 302-712 |
| Cow position: | chr10:38847130-38847543 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 118 |
| Conread position: | 303-753 |
| Cow position: | chr10:34318499-34318065 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 25 |
| Conread position: | 304-658 |
| Cow position: | chr10:19839914-19840282 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 304-753 |
| Cow position: | chr10:10478379-10477911 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 305-709 |
| Cow position: | chr10:57559785-57559366 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 305-715 |
| Cow position: | chr10:54059584-54059168 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 305-753 |
| Cow position: | chr10:21901433-21900975 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 305-753 |
| Cow position: | chr10:29696004-29696465 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 306-575 |
| Cow position: | chr10:37060692-37060968 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 306-620 |
| Cow position: | chr10:57990202-57989875 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 271 |
| Conread position: | 306-675 |
| Cow position: | chr10:60489426-60489802 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 306-753 |
| Cow position: | chr10:7282921-7282457 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 167 |
| Conread position: | 306-753 |
| Cow position: | chr10:21400905-21400441 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 306-753 |
| Cow position: | chr10:41157218-41157677 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 306-753 |
| Cow position: | chr10:62216369-62216836 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 225 |
| Conread position: | 308-753 |
| Cow position: | chr10:124072-124540 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 311-753 |
| Cow position: | chr10:32650501-32650963 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 313-707 |
| Cow position: | chr10:4499479-4499861 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 170, 21 |
| Conread position: | 313-751 |
| Cow position: | chr10:14859747-14860194 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 193 |
| Conread position: | 313-753 |
| Cow position: | chr10:25498126-25498582 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 19 |
| Conread position: | 313-753 |
| Cow position: | chr10:25565476-25565028 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 258 |
| Conread position: | 313-753 |
| Cow position: | chr10:34685666-34686123 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 313-753 |
| Cow position: | chr10:39817580-39817133 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 141 |
| Conread position: | 313-753 |
| Cow position: | chr10:62409082-62408627 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 314-574 |
| Cow position: | chr10:42628439-42628704 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 74 |
| Conread position: | 324-753 |
| Cow position: | chr10:31523620-31524028 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 300, 86 |
| Conread position: | 346-751 |
| Cow position: | chr10:13366050-13365642 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 179 |
| Conread position: | 350-753 |
| Cow position: | chr10:46191181-46191588 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 65 |
| Conread position: | 351-753 |
| Cow position: | chr10:19496469-19496056 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 397-731 |
| Cow position: | chr10:44294697-44295035 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 400-753 |
| Cow position: | chr10:15862278-15861907 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 132 |
| Conread position: | 406-658 |
| Cow position: | chr10:39904789-39905055 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 176 |
| Conread position: | 408-753 |
| Cow position: | chr10:46694516-46694146 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 412-753 |
| Cow position: | chr10:10415299-10415628 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 421-748 |
| Cow position: | chr10:39854136-39853785 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 425-670 |
| Cow position: | chr10:22842663-22842916 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 138 |
| Conread position: | 436-751 |
| Cow position: | chr10:14951794-14952097 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 439-709 |
| Cow position: | chr10:66176004-66175727 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 440-753 |
| Cow position: | chr10:38404610-38404279 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 445-753 |
| Cow position: | chr10:16925437-16925766 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 517-753 |
| Cow position: | chr10:2123276-2123032 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 517-753 |
| Cow position: | chr10:40152468-40152225 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 529-753 |
| Cow position: | chr10:55093240-55093469 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 537-716 |
| Cow position: | chr10:39445133-39444951 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 538-744 |
| Cow position: | chr10:11820340-11820555 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 542-657 |
| Cow position: | chr10:25454601-25454718 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 542-750 |
| Cow position: | chr10:58377577-58377367 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 568-753 |
| Cow position: | chr10:19758390-19758578 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 570-753 |
| Cow position: | chr10:28931984-28931795 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 594-753 |
| Cow position: | chr10:8328209-8328039 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.