Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               290-753
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 374
               

               Conread position:
               295-525
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 205
               

               Conread position:
               295-653
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-742
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 203
               

               Conread position:
               295-742
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               295-750
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 193
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 293
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 269
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 261
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               297-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               298-443
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               298-656
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               298-751
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               298-751
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 111
               

               Conread position:
               298-752
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               320
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               300-525
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 135
               

               Conread position:
               300-751
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               300-751
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 245
               

               Conread position:
               301-716
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               301-749
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               301-751
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 322
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 201
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               302-712
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 25
               

               Conread position:
               304-658
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               304-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               305-709
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               305-715
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 19
               

               Conread position:
               306-575
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               306-620
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 271
               

               Conread position:
               306-675
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 167
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 225
               

               Conread position:
               308-753
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               311-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               313-707
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               170, 21
               

               Conread position:
               313-751
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 193
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 19
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 258
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 141
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               314-574
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               324-753
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               300, 86
               

               Conread position:
               346-751
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 179
               

               Conread position:
               350-753
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 65
               

               Conread position:
               351-753
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               397-731
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               400-753
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               406-658
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               16, 176
               

               Conread position:
               408-753
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               412-753
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               421-748
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               425-670
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               436-751
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               439-709
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               440-753
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               445-753
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               529-753
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               537-716
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               538-744
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               542-657
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               542-750
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               568-753
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               570-753
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               594-753
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               14, 0
               
Show alignments to all cow chromosomes.