Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               289-749
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               289-753
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 326
               

               Conread position:
               290-570
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               294-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 244
               

               Conread position:
               295-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 294
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 357
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 126
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 396
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               297-473
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 388
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               300-525
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               300-701
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 105
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 86
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 105
               

               Conread position:
               301-464
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               301-752
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-752
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 104
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 408
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               302-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 339
               

               Conread position:
               303-707
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               303-751
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 117
               

               Conread position:
               304-746
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               304-751
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               305-752
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 176
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 114
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 100
               

               Conread position:
               306-512
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               306-709
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-748
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               306-751
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-752
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 97
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 177
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 306
               

               Conread position:
               307-695
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               194, 112
               

               Conread position:
               307-715
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 131
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 83
               

               Conread position:
               308-481
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               308-709
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 15
               

               Conread position:
               308-751
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               309-480
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               309-525
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               193, 87
               

               Conread position:
               309-707
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               310-753
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               311-718
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               312-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 38
               

               Conread position:
               313-520
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               313-616
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               109, 145
               

               Conread position:
               313-720
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               304, 92
               

               Conread position:
               313-751
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 174
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 92
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 124
               

               Conread position:
               315-520
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               315-752
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 90
               

               Conread position:
               318-620
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               324-706
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 223
               

               Conread position:
               324-753
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               326-748
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 88
               

               Conread position:
               345-753
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               345-753
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 74
               

               Conread position:
               348-753
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               353-750
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 206
               

               Conread position:
               372-753
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               395-726
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 303
               

               Conread position:
               396-751
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 235
               

               Conread position:
               412-751
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               413-753
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 194
               

               Conread position:
               423-753
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               442-753
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               462-753
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               58, 153
               

               Conread position:
               516-669
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 49
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               520-753
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               523-753
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               548-753
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               553-753
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               556-746
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               568-708
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               572-703
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               592-753
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               596-753
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               607-750
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.