Cow genome map

Conread name: Lng1-LNG010086A07

Conread position: 289-749
Cow position: chr11:3492395-3492875 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 289-753
Cow position: chr11:28230366-28229885 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 326

Conread position: 290-570
Cow position: chr11:7687301-7687596 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 35, 139

Conread position: 294-753
Cow position: chr11:44861136-44860661 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 244

Conread position: 295-731
Cow position: chr11:54209016-54209463 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 108

Conread position: 295-753
Cow position: chr11:8244111-8244572 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 82

Conread position: 295-753
Cow position: chr11:11987508-11987976 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr11:12359033-12358557 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 294

Conread position: 295-753
Cow position: chr11:19103097-19102618 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 140

Conread position: 295-753
Cow position: chr11:23876693-23877170 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 357

Conread position: 295-753
Cow position: chr11:24392715-24393185 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 295-753
Cow position: chr11:26125539-26125063 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 295-753
Cow position: chr11:28055205-28054732 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 126

Conread position: 295-753
Cow position: chr11:38836028-38835553 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 396

Conread position: 295-753
Cow position: chr11:41171304-41170824 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 295-753
Cow position: chr11:42428728-42429201 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 295-753
Cow position: chr11:43515240-43514762 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 29

Conread position: 295-753
Cow position: chr11:58133760-58134238 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 110

Conread position: 295-753
Cow position: chr11:72110570-72110097 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 297-473
Cow position: chr11:31925591-31925769 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 298-753
Cow position: chr11:4028159-4027695 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 388

Conread position: 299-753
Cow position: chr11:67449884-67450366 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 300-525
Cow position: chr11:31414841-31414616 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 34

Conread position: 300-701
Cow position: chr11:9659999-9659586 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 105

Conread position: 300-753
Cow position: chr11:37492249-37491777 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 86

Conread position: 300-753
Cow position: chr11:44157841-44157369 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 105

Conread position: 301-464
Cow position: chr11:33195217-33195059 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 100

Conread position: 301-752
Cow position: chr11:20921351-20920878 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 301-752
Cow position: chr11:36744782-36744313 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 104

Conread position: 301-753
Cow position: chr11:17108291-17107818 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 185

Conread position: 301-753
Cow position: chr11:19064855-19064381 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 301-753
Cow position: chr11:32450262-32450735 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 408

Conread position: 301-753
Cow position: chr11:57628652-57628178 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 301-753
Cow position: chr11:67847172-67846703 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 301-753
Cow position: chr11:71329040-71329512 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 302-753
Cow position: chr11:63660185-63659713 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 339

Conread position: 303-707
Cow position: chr11:65162138-65161745 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 88

Conread position: 303-751
Cow position: chr11:8262298-8261837 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 117

Conread position: 304-746
Cow position: chr11:29234249-29233795 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 297
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 116

Conread position: 304-751
Cow position: chr11:4041663-4041210 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 102

Conread position: 305-752
Cow position: chr11:53288055-53287588 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 305-753
Cow position: chr11:8887750-8887290 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 176

Conread position: 305-753
Cow position: chr11:10210563-10210094 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 114

Conread position: 305-753
Cow position: chr11:37477716-37477251 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 100

Conread position: 306-512
Cow position: chr11:7073072-7072864 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 27

Conread position: 306-709
Cow position: chr11:77729126-77728707 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 306-748
Cow position: chr11:44496186-44495732 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 306-751
Cow position: chr11:29669229-29668762 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 306-752
Cow position: chr11:10846845-10847309 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 306-753
Cow position: chr11:34020309-34020758 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 97

Conread position: 306-753
Cow position: chr11:37093662-37093193 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 177

Conread position: 306-753
Cow position: chr11:85394409-85393943 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 306

Conread position: 307-695
Cow position: chr11:28050380-28049987 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 194, 112

Conread position: 307-715
Cow position: chr11:15998300-15998719 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 131

Conread position: 307-753
Cow position: chr11:25526983-25527426 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 83

Conread position: 308-481
Cow position: chr11:8896048-8896219 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 20

Conread position: 308-709
Cow position: chr11:30125840-30125428 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 15

Conread position: 308-751
Cow position: chr11:21466478-21466943 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 309-480
Cow position: chr11:12093164-12093329 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 103

Conread position: 309-525
Cow position: chr11:11126323-11126535 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 193, 87

Conread position: 309-707
Cow position: chr11:50029289-50028883 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 23

Conread position: 310-753
Cow position: chr11:28063094-28063544 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 311-718
Cow position: chr11:35228613-35228208 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 266
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 59

Conread position: 312-753
Cow position: chr11:1496660-1496206 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 38

Conread position: 313-520
Cow position: chr11:40777324-40777115 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 313-616
Cow position: chr11:9736544-9736227 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 145

Conread position: 313-720
Cow position: chr11:76375061-76374690 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 304, 92

Conread position: 313-751
Cow position: chr11:17220804-17220349 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 174

Conread position: 313-753
Cow position: chr11:9158013-9157565 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 92

Conread position: 313-753
Cow position: chr11:12351655-12351197 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 124

Conread position: 315-520
Cow position: chr11:17280825-17280629 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 315-752
Cow position: chr11:52418801-52419255 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 90

Conread position: 318-620
Cow position: chr11:77235174-77235495 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 324-706
Cow position: chr11:44895598-44895204 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 223

Conread position: 324-753
Cow position: chr11:15983049-15983492 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 57

Conread position: 326-748
Cow position: chr11:75919842-75920276 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 88

Conread position: 345-753
Cow position: chr11:7113041-7113462 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 98

Conread position: 345-753
Cow position: chr11:30304689-30305099 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 74

Conread position: 348-753
Cow position: chr11:4271424-4271003 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 55

Conread position: 353-750
Cow position: chr11:9607127-9606714 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 206

Conread position: 372-753
Cow position: chr11:61401570-61401183 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 33

Conread position: 395-726
Cow position: chr11:14730030-14729686 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 303

Conread position: 396-751
Cow position: chr11:45110851-45111235 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 235

Conread position: 412-751
Cow position: chr11:81853113-81852766 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 93, 10

Conread position: 413-753
Cow position: chr11:8282586-8282944 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 194

Conread position: 423-753
Cow position: chr11:10049643-10049988 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 48

Conread position: 442-753
Cow position: chr11:10089873-10090203 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 103

Conread position: 462-753
Cow position: chr11:66726023-66726332 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 58, 153

Conread position: 516-669
Cow position: chr11:47761307-47761148 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 517-753
Cow position: chr11:32684913-32685152 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 49

Conread position: 517-753
Cow position: chr11:37065499-37065253 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 57, 78

Conread position: 517-753
Cow position: chr11:64045622-64045866 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 520-753
Cow position: chr11:40776915-40776674 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 523-753
Cow position: chr11:5343587-5343349 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 548-753
Cow position: chr11:31414267-31414058 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 33

Conread position: 553-753
Cow position: chr11:73476968-73477176 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 556-746
Cow position: chr11:7688276-7688470 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 25

Conread position: 568-708
Cow position: chr11:24243136-24243275 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 58

Conread position: 572-703
Cow position: chr11:59370669-59370536 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 30

Conread position: 592-753
Cow position: chr11:52886796-52886636 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 113

Conread position: 596-753
Cow position: chr11:8519697-8519859 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 150

Conread position: 607-750
Cow position: chr11:17280578-17280429 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.