Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 295-575 |
| Cow position: | chr13:4481931-4482219 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-639 |
| Cow position: | chr13:32544403-32544754 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 295-753 |
| Cow position: | chr13:1593700-1593221 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 324 |
| Conread position: | 295-753 |
| Cow position: | chr13:4940541-4941022 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr13:6668669-6668189 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 295-753 |
| Cow position: | chr13:15924928-15924450 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-753 |
| Cow position: | chr13:32738364-32737888 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 295-753 |
| Cow position: | chr13:33336868-33336408 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 186 |
| Conread position: | 295-753 |
| Cow position: | chr13:34042910-34042435 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 294 |
| Conread position: | 296-753 |
| Cow position: | chr13:2389338-2388884 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 297-753 |
| Cow position: | chr13:3654848-3654392 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 298-749 |
| Cow position: | chr13:31734622-31734155 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 298-751 |
| Cow position: | chr13:34143197-34142726 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 15 |
| Conread position: | 298-753 |
| Cow position: | chr13:30657502-30657042 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 121 |
| Conread position: | 299-753 |
| Cow position: | chr13:17307940-17308409 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 120 |
| Conread position: | 299-753 |
| Cow position: | chr13:35756700-35757175 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 300-499 |
| Cow position: | chr13:13046359-13046162 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 300-753 |
| Cow position: | chr13:2908983-2908516 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 300-753 |
| Cow position: | chr13:20542900-20542441 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 300-753 |
| Cow position: | chr13:31612877-31612400 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 300-753 |
| Cow position: | chr13:34326215-34325741 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 100 |
| Conread position: | 300-753 |
| Cow position: | chr13:34692624-34693097 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 301-525 |
| Cow position: | chr13:3058532-3058306 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 301-716 |
| Cow position: | chr13:33825266-33824838 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 113 |
| Conread position: | 301-753 |
| Cow position: | chr13:4872540-4873011 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 301-753 |
| Cow position: | chr13:30245273-30244799 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 231 |
| Conread position: | 301-753 |
| Cow position: | chr13:32986585-32986122 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 301-753 |
| Cow position: | chr13:54284055-54284504 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 17 |
| Conread position: | 302-753 |
| Cow position: | chr13:31832069-31832534 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 303-701 |
| Cow position: | chr13:48356790-48357183 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 121 |
| Conread position: | 303-753 |
| Cow position: | chr13:3276621-3277088 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 303-753 |
| Cow position: | chr13:34187226-34186751 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 303-753 |
| Cow position: | chr13:62328118-62327650 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 242 |
| Conread position: | 304-474 |
| Cow position: | chr13:34027737-34027908 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 304-753 |
| Cow position: | chr13:9043974-9044435 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 305-715 |
| Cow position: | chr13:2297330-2296906 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 305-753 |
| Cow position: | chr13:21840729-21840260 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 306-702 |
| Cow position: | chr13:30302538-30302943 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 306-746 |
| Cow position: | chr13:15521048-15520588 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 306-751 |
| Cow position: | chr13:34911898-34911446 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 17 |
| Conread position: | 306-753 |
| Cow position: | chr13:23410529-23410072 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 306-753 |
| Cow position: | chr13:50108932-50109396 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 307-670 |
| Cow position: | chr13:34868238-34868619 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 307-747 |
| Cow position: | chr13:30140462-30140923 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 305 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 311-658 |
| Cow position: | chr13:2232132-2232493 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 8 |
| Conread position: | 313-612 |
| Cow position: | chr13:30237644-30237953 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 87, 198 |
| Conread position: | 313-753 |
| Cow position: | chr13:34936613-34937081 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 315-748 |
| Cow position: | chr13:2305979-2306423 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 324-464 |
| Cow position: | chr13:32606689-32606548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 324-702 |
| Cow position: | chr13:33928074-33927691 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 91 |
| Conread position: | 333-753 |
| Cow position: | chr13:31560687-31561121 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 138, 48 |
| Conread position: | 335-504 |
| Cow position: | chr13:47859949-47860114 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 345-753 |
| Cow position: | chr13:13324263-13324683 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 69 |
| Conread position: | 350-752 |
| Cow position: | chr13:56730762-56730353 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 378-716 |
| Cow position: | chr13:10115081-10114760 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 383-753 |
| Cow position: | chr13:49973226-49973618 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 386-753 |
| Cow position: | chr13:22186172-22185801 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 389-751 |
| Cow position: | chr13:23003966-23003584 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 305 |
| Conread position: | 404-752 |
| Cow position: | chr13:15080633-15080284 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 407-708 |
| Cow position: | chr13:2583734-2583421 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 460-673 |
| Cow position: | chr13:15451863-15451649 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 519-753 |
| Cow position: | chr13:3567475-3567728 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 522-751 |
| Cow position: | chr13:34767581-34767354 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 33 |
| Conread position: | 537-753 |
| Cow position: | chr13:47230276-47230053 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 590-753 |
| Cow position: | chr13:4178886-4178717 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.