Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               295-575
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-639
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 324
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 186
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 294
               

               Conread position:
               296-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               297-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               298-749
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               298-751
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 15
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 121
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 120
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 121
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 120
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 100
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               301-525
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               301-716
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 113
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 231
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 17
               

               Conread position:
               302-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 105
               

               Conread position:
               303-701
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 121
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 242
               

               Conread position:
               304-474
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               304-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 151
               

               Conread position:
               305-715
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               306-702
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               306-746
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-751
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 17
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               307-670
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               307-747
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               311-658
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 8
               

               Conread position:
               313-612
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 198
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               315-748
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               104, 113
               

               Conread position:
               324-464
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               324-702
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 91
               

               Conread position:
               333-753
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               138, 48
               

               Conread position:
               335-504
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               345-753
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 69
               

               Conread position:
               350-752
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 26
               

               Conread position:
               378-716
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               383-753
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               386-753
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               389-751
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 305
               

               Conread position:
               404-752
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               407-708
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               460-673
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               519-753
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               522-751
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 33
               

               Conread position:
               537-753
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               590-753
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.