Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 290-753 |
| Cow position: | chr14:22018731-22019203 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 293-748 |
| Cow position: | chr14:43034546-43034082 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 190, 39 |
| Conread position: | 294-753 |
| Cow position: | chr14:36967589-36968065 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 151 |
| Conread position: | 295-455 |
| Cow position: | chr14:13778195-13778357 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-736 |
| Cow position: | chr14:45079868-45080313 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 295-750 |
| Cow position: | chr14:35928516-35928986 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 18 |
| Conread position: | 295-753 |
| Cow position: | chr14:5528398-5528872 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 295-753 |
| Cow position: | chr14:7471707-7472184 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr14:11154822-11154355 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 186 |
| Conread position: | 295-753 |
| Cow position: | chr14:13302362-13302838 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 295-753 |
| Cow position: | chr14:16920351-16919880 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 295-753 |
| Cow position: | chr14:17001724-17001244 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 295-753 |
| Cow position: | chr14:19328935-19328458 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 295-753 |
| Cow position: | chr14:22032351-22031877 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr14:28994524-28994044 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr14:37223233-37223712 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 314 |
| Conread position: | 295-753 |
| Cow position: | chr14:41755205-41755654 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 297-749 |
| Cow position: | chr14:45712641-45712180 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 205 |
| Conread position: | 297-753 |
| Cow position: | chr14:44685382-44685853 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 322 |
| Conread position: | 298-688 |
| Cow position: | chr14:31607583-31607187 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 201, 117 |
| Conread position: | 298-753 |
| Cow position: | chr14:23690889-23690419 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 183 |
| Conread position: | 298-753 |
| Cow position: | chr14:33394438-33393966 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 298-753 |
| Cow position: | chr14:45767339-45767812 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 245 |
| Conread position: | 299-477 |
| Cow position: | chr14:45916736-45916913 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 299-682 |
| Cow position: | chr14:40170337-40169951 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 43 |
| Conread position: | 300-464 |
| Cow position: | chr14:41085470-41085313 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 300-647 |
| Cow position: | chr14:45160202-45160546 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 110 |
| Conread position: | 300-716 |
| Cow position: | chr14:44130262-44130684 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 300-753 |
| Cow position: | chr14:14309727-14309266 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 160 |
| Conread position: | 300-753 |
| Cow position: | chr14:17684733-17685206 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 62 |
| Conread position: | 300-753 |
| Cow position: | chr14:20781793-20782266 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 364 |
| Conread position: | 300-753 |
| Cow position: | chr14:44856088-44855617 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 126 |
| Conread position: | 301-716 |
| Cow position: | chr14:13660644-13660219 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 21 |
| Conread position: | 301-749 |
| Cow position: | chr14:45672708-45672239 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 461 |
| Conread position: | 301-753 |
| Cow position: | chr14:9044902-9045376 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr14:30585599-30585141 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 302-753 |
| Cow position: | chr14:29048559-29048093 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 110 |
| Conread position: | 303-749 |
| Cow position: | chr14:44225754-44226203 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 92 |
| Conread position: | 303-750 |
| Cow position: | chr14:40339048-40339489 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 104 |
| Conread position: | 303-753 |
| Cow position: | chr14:7831199-7830730 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 340 |
| Conread position: | 303-753 |
| Cow position: | chr14:35387790-35387339 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 303-753 |
| Cow position: | chr14:45850566-45851032 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 305-728 |
| Cow position: | chr14:16273954-16273510 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 305-753 |
| Cow position: | chr14:13272605-13273057 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 305-753 |
| Cow position: | chr14:23256703-23257169 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 111 |
| Conread position: | 306-706 |
| Cow position: | chr14:44376780-44377188 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 306-709 |
| Cow position: | chr14:11467941-11468348 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 178 |
| Conread position: | 306-716 |
| Cow position: | chr14:34924896-34925320 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 306-750 |
| Cow position: | chr14:30597026-30596576 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 306-753 |
| Cow position: | chr14:44421900-44422364 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 306-753 |
| Cow position: | chr14:50109922-50110376 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 327 |
| Conread position: | 307-717 |
| Cow position: | chr14:47589217-47589641 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 307-748 |
| Cow position: | chr14:38532953-38532487 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 64 |
| Conread position: | 307-749 |
| Cow position: | chr14:12608555-12608988 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 308-706 |
| Cow position: | chr14:44261748-44261334 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 247 |
| Conread position: | 309-750 |
| Cow position: | chr14:46083972-46084424 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 33 |
| Conread position: | 311-753 |
| Cow position: | chr14:47623917-47624370 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 294 |
| Conread position: | 312-753 |
| Cow position: | chr14:45205422-45205888 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 95 |
| Conread position: | 313-749 |
| Cow position: | chr14:749919-750376 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 313-753 |
| Cow position: | chr14:17492107-17491646 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 314-753 |
| Cow position: | chr14:48254961-48254505 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 319-477 |
| Cow position: | chr14:34774952-34775109 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 327-753 |
| Cow position: | chr14:45833528-45833964 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 333-525 |
| Cow position: | chr14:47921376-47921569 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 338-753 |
| Cow position: | chr14:42151699-42152133 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 345-644 |
| Cow position: | chr14:13622228-13621915 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 347-753 |
| Cow position: | chr14:45303976-45303554 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 74 |
| Conread position: | 353-709 |
| Cow position: | chr14:47654141-47654497 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 58 |
| Conread position: | 372-753 |
| Cow position: | chr14:45029704-45029313 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 285 |
| Conread position: | 377-753 |
| Cow position: | chr14:41407262-41407631 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 383-753 |
| Cow position: | chr14:23901381-23900990 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 387-750 |
| Cow position: | chr14:50134496-50134881 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 388-753 |
| Cow position: | chr14:2283764-2284149 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 396-753 |
| Cow position: | chr14:46464503-46464883 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 241 |
| Conread position: | 400-753 |
| Cow position: | chr14:48824053-48824393 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 449-752 |
| Cow position: | chr14:41085296-41084976 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 517-750 |
| Cow position: | chr14:13864517-13864275 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 517-753 |
| Cow position: | chr14:13480161-13479924 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 517-753 |
| Cow position: | chr14:45916983-45917228 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 519-753 |
| Cow position: | chr14:37414320-37414076 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 537-746 |
| Cow position: | chr14:19619812-19620023 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 568-752 |
| Cow position: | chr14:44551504-44551691 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 572-753 |
| Cow position: | chr14:5511446-5511632 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 87, 107 |
| Conread position: | 594-753 |
| Cow position: | chr14:38146228-38146385 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 602-753 |
| Cow position: | chr14:42198245-42198399 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.