Cow genome map
Conread name: | Lng1-LNG010086A07 |
Conread position: | 289-749 |
Cow position: | chr16:5660840-5661310 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 294 |
Conread position: | 292-753 |
Cow position: | chr16:29046003-29046486 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 295-497 |
Cow position: | chr16:7676708-7676507 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 20, 109 |
Conread position: | 295-497 |
Cow position: | chr16:9777117-9777321 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 153 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 295-616 |
Cow position: | chr16:24881701-24881369 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 95 |
Conread position: | 295-751 |
Cow position: | chr16:15491693-15492171 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 295-751 |
Cow position: | chr16:23982297-23982773 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 252 |
Conread position: | 295-751 |
Cow position: | chr16:40887273-40886798 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 322 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 85, 18 |
Conread position: | 295-753 |
Cow position: | chr16:408046-407567 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 295-753 |
Cow position: | chr16:1568464-1567990 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 88 |
Conread position: | 295-753 |
Cow position: | chr16:2411984-2411505 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 348 |
Conread position: | 295-753 |
Cow position: | chr16:2484151-2483678 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 109 |
Conread position: | 295-753 |
Cow position: | chr16:8817119-8816640 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 140 |
Conread position: | 295-753 |
Cow position: | chr16:10204429-10203966 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 97 |
Conread position: | 295-753 |
Cow position: | chr16:10437243-10437707 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 99 |
Conread position: | 295-753 |
Cow position: | chr16:15565736-15566209 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 187 |
Conread position: | 295-753 |
Cow position: | chr16:23253517-23253043 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 48 |
Conread position: | 295-753 |
Cow position: | chr16:25340957-25341429 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 109 |
Conread position: | 295-753 |
Cow position: | chr16:27734819-27734338 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 295-753 |
Cow position: | chr16:28472110-28471637 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 357 |
Conread position: | 295-753 |
Cow position: | chr16:31592920-31592440 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 295-753 |
Cow position: | chr16:40297189-40296714 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 295-753 |
Cow position: | chr16:43898283-43897804 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 297-564 |
Cow position: | chr16:44965048-44965320 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 194 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 122, 31 |
Conread position: | 297-751 |
Cow position: | chr16:12538936-12538462 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 389 |
Conread position: | 300-658 |
Cow position: | chr16:25152775-25153126 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 252 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 124, 32 |
Conread position: | 300-750 |
Cow position: | chr16:25157225-25156763 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 124 |
Conread position: | 300-751 |
Cow position: | chr16:20255315-20254849 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 35 |
Conread position: | 300-753 |
Cow position: | chr16:6549529-6549060 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 53 |
Conread position: | 300-753 |
Cow position: | chr16:9929547-9930004 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 316 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 14, 105 |
Conread position: | 300-753 |
Cow position: | chr16:19713856-19713425 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 103 |
Conread position: | 300-753 |
Cow position: | chr16:26662742-26663213 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 105 |
Conread position: | 301-472 |
Cow position: | chr16:14422707-14422881 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 301-583 |
Cow position: | chr16:16687862-16688146 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 209 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 107, 202 |
Conread position: | 301-697 |
Cow position: | chr16:32605819-32606233 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 301-709 |
Cow position: | chr16:6942614-6943040 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 301-716 |
Cow position: | chr16:4303478-4303054 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 99 |
Conread position: | 301-753 |
Cow position: | chr16:5918477-5918947 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 323 |
Conread position: | 303-750 |
Cow position: | chr16:49257571-49257122 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 60 |
Conread position: | 305-630 |
Cow position: | chr16:9457524-9457841 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 220 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 116, 27 |
Conread position: | 305-684 |
Cow position: | chr16:18688128-18687734 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 31 |
Conread position: | 305-693 |
Cow position: | chr16:1430224-1430623 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 182 |
Conread position: | 305-750 |
Cow position: | chr16:42740425-42739962 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 20 |
Conread position: | 305-753 |
Cow position: | chr16:28171362-28170899 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 162 |
Conread position: | 306-493 |
Cow position: | chr16:29031913-29032100 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 140 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 11, 164 |
Conread position: | 306-527 |
Cow position: | chr16:2728316-2728095 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 171 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 8, 128 |
Conread position: | 306-658 |
Cow position: | chr16:29676308-29675947 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 317 |
Conread position: | 306-751 |
Cow position: | chr16:15183803-15184265 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 98 |
Conread position: | 306-753 |
Cow position: | chr16:2239733-2239268 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 48 |
Conread position: | 306-753 |
Cow position: | chr16:7905640-7906083 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 80 |
Conread position: | 306-753 |
Cow position: | chr16:25084618-25085085 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 306-753 |
Cow position: | chr16:49236116-49235687 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 13 |
Conread position: | 307-685 |
Cow position: | chr16:47562693-47563073 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 267 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 307-753 |
Cow position: | chr16:25440619-25441082 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 12 |
Conread position: | 307-753 |
Cow position: | chr16:25458470-25458007 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 12 |
Conread position: | 308-724 |
Cow position: | chr16:5888488-5888898 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 284 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 118, 14 |
Conread position: | 310-753 |
Cow position: | chr16:41559678-41560122 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 27 |
Conread position: | 313-499 |
Cow position: | chr16:32935146-32935327 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 313-524 |
Cow position: | chr16:10376266-10376057 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 121 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 313-695 |
Cow position: | chr16:54647332-54647719 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 21 |
Conread position: | 313-716 |
Cow position: | chr16:11052177-11052585 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 90 |
Conread position: | 313-753 |
Cow position: | chr16:31757-32202 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 10 |
Conread position: | 313-753 |
Cow position: | chr16:36232600-36232151 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 104 |
Conread position: | 315-753 |
Cow position: | chr16:36282405-36282861 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 234 |
Conread position: | 324-753 |
Cow position: | chr16:11111918-11111478 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 294 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 101, 37 |
Conread position: | 338-753 |
Cow position: | chr16:36362318-36361899 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 85 |
Conread position: | 340-753 |
Cow position: | chr16:25187673-25188106 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 411 |
Conread position: | 342-707 |
Cow position: | chr16:16276471-16276092 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 212 |
Conread position: | 347-753 |
Cow position: | chr16:51685482-51685901 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 285 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 158, 57 |
Conread position: | 350-750 |
Cow position: | chr16:56551170-56551581 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 241 |
Conread position: | 350-753 |
Cow position: | chr16:10808208-10808614 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 69 |
Conread position: | 364-753 |
Cow position: | chr16:39820694-39821094 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 50 |
Conread position: | 365-525 |
Cow position: | chr16:56320894-56321055 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 375-753 |
Cow position: | chr16:836097-836493 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 27 |
Conread position: | 396-751 |
Cow position: | chr16:34529413-34529783 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 185 |
Conread position: | 402-753 |
Cow position: | chr16:335395-335755 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 20 |
Conread position: | 405-753 |
Cow position: | chr16:5483418-5483787 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 413-753 |
Cow position: | chr16:42051267-42050923 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 245 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 8, 62 |
Conread position: | 424-753 |
Cow position: | chr16:14666714-14666365 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 517-709 |
Cow position: | chr16:32935380-32935575 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 60, 75 |
Conread position: | 517-718 |
Cow position: | chr16:2728080-2727875 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 558-753 |
Cow position: | chr16:44966436-44966632 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 139 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 596-753 |
Cow position: | chr16:53045654-53045818 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.