Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               289-749
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 294
               

               Conread position:
               292-753
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               295-497
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               295-497
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               295-616
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               295-751
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-751
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 252
               

               Conread position:
               295-751
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 348
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 187
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 357
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               297-564
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               297-751
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 389
               

               Conread position:
               300-658
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               300-750
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 124
               

               Conread position:
               300-751
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 53
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               316
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 103
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 105
               

               Conread position:
               301-472
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               301-583
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               107, 202
               

               Conread position:
               301-697
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-709
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-716
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 323
               

               Conread position:
               303-750
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               305-630
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               116, 27
               

               Conread position:
               305-684
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               305-693
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 182
               

               Conread position:
               305-750
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 162
               

               Conread position:
               306-493
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 164
               

               Conread position:
               306-527
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               8, 128
               

               Conread position:
               306-658
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 317
               

               Conread position:
               306-751
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 13
               

               Conread position:
               307-685
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 12
               

               Conread position:
               308-724
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               310-753
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               313-499
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               313-524
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               313-695
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 21
               

               Conread position:
               313-716
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 90
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 10
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               315-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 234
               

               Conread position:
               324-753
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 37
               

               Conread position:
               338-753
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 85
               

               Conread position:
               340-753
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 411
               

               Conread position:
               342-707
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 212
               

               Conread position:
               347-753
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               158, 57
               

               Conread position:
               350-750
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 241
               

               Conread position:
               350-753
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 69
               

               Conread position:
               364-753
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 50
               

               Conread position:
               365-525
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               375-753
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               396-751
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 185
               

               Conread position:
               402-753
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               405-753
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               413-753
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               424-753
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               517-709
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               517-718
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               558-753
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               596-753
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.