Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 289-753 |
| Cow position: | chr17:15143814-15143325 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 295-525 |
| Cow position: | chr17:2579123-2579352 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 295-751 |
| Cow position: | chr17:19269802-19269326 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 295-753 |
| Cow position: | chr17:4081217-4081674 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 23 |
| Conread position: | 295-753 |
| Cow position: | chr17:11088158-11087682 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 108 |
| Conread position: | 295-753 |
| Cow position: | chr17:13857211-13856727 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 295-753 |
| Cow position: | chr17:25737226-25737705 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 297-751 |
| Cow position: | chr17:18104115-18103640 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 340 |
| Conread position: | 299-753 |
| Cow position: | chr17:2587903-2588348 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 300-455 |
| Cow position: | chr17:32024627-32024472 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 122, 102 |
| Conread position: | 300-738 |
| Cow position: | chr17:20401250-20401700 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 300-753 |
| Cow position: | chr17:14325925-14325465 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 95 |
| Conread position: | 300-753 |
| Cow position: | chr17:15370648-15371092 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 300-753 |
| Cow position: | chr17:16859988-16859519 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 437 |
| Conread position: | 300-753 |
| Cow position: | chr17:16889695-16890166 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 44 |
| Conread position: | 300-753 |
| Cow position: | chr17:23857468-23856992 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 301-594 |
| Cow position: | chr17:11782939-11783234 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-715 |
| Cow position: | chr17:22160484-22160916 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr17:1383243-1382772 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 301-753 |
| Cow position: | chr17:2249013-2248542 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 269 |
| Conread position: | 301-753 |
| Cow position: | chr17:6089593-6089119 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr17:8208679-8209148 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 104 |
| Conread position: | 301-753 |
| Cow position: | chr17:9653881-9653414 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 301-753 |
| Cow position: | chr17:14217456-14216981 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr17:15435361-15435833 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 301-753 |
| Cow position: | chr17:15849968-15850438 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 47 |
| Conread position: | 301-753 |
| Cow position: | chr17:20666158-20665684 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr17:24633525-24633996 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 301-753 |
| Cow position: | chr17:24780616-24781090 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 302-753 |
| Cow position: | chr17:27345378-27345841 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 59 |
| Conread position: | 302-753 |
| Cow position: | chr17:39933262-39933697 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 39 |
| Conread position: | 305-753 |
| Cow position: | chr17:1879665-1880136 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 124 |
| Conread position: | 306-534 |
| Cow position: | chr17:2737952-2738179 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 217 |
| Conread position: | 306-753 |
| Cow position: | chr17:2286950-2287428 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 134 |
| Conread position: | 306-753 |
| Cow position: | chr17:22429908-22429452 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 307-608 |
| Cow position: | chr17:28109663-28109974 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 118, 17 |
| Conread position: | 307-753 |
| Cow position: | chr17:14893738-14894195 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 308-594 |
| Cow position: | chr17:40803971-40804270 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 282 |
| Conread position: | 308-751 |
| Cow position: | chr17:14308728-14308273 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 308-753 |
| Cow position: | chr17:42264102-42264546 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 309-694 |
| Cow position: | chr17:15322407-15322788 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 96 |
| Conread position: | 309-748 |
| Cow position: | chr17:228725-228271 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 222 |
| Conread position: | 309-752 |
| Cow position: | chr17:13929244-13929709 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 309-753 |
| Cow position: | chr17:2146787-2147212 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 310-708 |
| Cow position: | chr17:18849290-18849691 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 310-753 |
| Cow position: | chr17:2173455-2173920 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 310-753 |
| Cow position: | chr17:3643258-3642794 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 311-661 |
| Cow position: | chr17:1284179-1283844 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 106 |
| Conread position: | 312-716 |
| Cow position: | chr17:152884-152480 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 51 |
| Conread position: | 313-749 |
| Cow position: | chr17:2261691-2262144 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 328 |
| Conread position: | 313-749 |
| Cow position: | chr17:15157378-15156926 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 106 |
| Conread position: | 314-753 |
| Cow position: | chr17:44853346-44852890 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 74 |
| Conread position: | 315-753 |
| Cow position: | chr17:4294961-4295387 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 80 |
| Conread position: | 318-753 |
| Cow position: | chr17:20183640-20183189 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 324-753 |
| Cow position: | chr17:35591807-35592255 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 223 |
| Conread position: | 332-749 |
| Cow position: | chr17:23324841-23324416 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 150 |
| Conread position: | 345-753 |
| Cow position: | chr17:1946589-1947012 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 360 |
| Conread position: | 347-753 |
| Cow position: | chr17:18185909-18185490 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 396-753 |
| Cow position: | chr17:22131898-22132270 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 397-753 |
| Cow position: | chr17:6259510-6259887 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 406-753 |
| Cow position: | chr17:20088056-20087702 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 241 |
| Conread position: | 517-753 |
| Cow position: | chr17:2555921-2556164 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 517-753 |
| Cow position: | chr17:18026959-18026715 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 544-751 |
| Cow position: | chr17:2579457-2579665 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 568-753 |
| Cow position: | chr17:31199792-31199608 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 590-753 |
| Cow position: | chr17:40804689-40804858 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.