Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 294-753 |
| Cow position: | chr18:27838534-27838066 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 332 |
| Conread position: | 295-525 |
| Cow position: | chr18:32651766-32651997 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 295-620 |
| Cow position: | chr18:27986799-27987138 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 295-753 |
| Cow position: | chr18:14415749-14416226 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 295-753 |
| Cow position: | chr18:23797421-23797897 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 295-753 |
| Cow position: | chr18:28974128-28973653 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 295-753 |
| Cow position: | chr18:37504836-37505314 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 108 |
| Conread position: | 295-753 |
| Cow position: | chr18:40478153-40478633 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 298 |
| Conread position: | 295-753 |
| Cow position: | chr18:51689398-51689874 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 119 |
| Conread position: | 297-658 |
| Cow position: | chr18:44621532-44621908 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 297-750 |
| Cow position: | chr18:16877258-16877717 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 297-753 |
| Cow position: | chr18:6869482-6869009 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 102 |
| Conread position: | 297-753 |
| Cow position: | chr18:36508106-36508582 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 340 |
| Conread position: | 298-753 |
| Cow position: | chr18:33268615-33269075 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 298-753 |
| Cow position: | chr18:35335264-35335729 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 298-753 |
| Cow position: | chr18:43147149-43146676 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 300-525 |
| Cow position: | chr18:25349812-25350041 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 300-670 |
| Cow position: | chr18:17992785-17992402 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 300-716 |
| Cow position: | chr18:16660228-16659809 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 184 |
| Conread position: | 300-753 |
| Cow position: | chr18:19352163-19352635 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 300-753 |
| Cow position: | chr18:33358644-33359115 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 105 |
| Conread position: | 300-753 |
| Cow position: | chr18:39748358-39748828 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 300-753 |
| Cow position: | chr18:48221654-48222129 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 301-753 |
| Cow position: | chr18:16078479-16078967 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 301-753 |
| Cow position: | chr18:22602263-22602737 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr18:33953791-33953319 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 301-753 |
| Cow position: | chr18:47741794-47742268 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 303-418 |
| Cow position: | chr18:14130071-14130188 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 303-741 |
| Cow position: | chr18:32293554-32294005 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 375 |
| Conread position: | 305-753 |
| Cow position: | chr18:23944591-23944125 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 239 |
| Conread position: | 305-753 |
| Cow position: | chr18:41841044-41840575 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 305-753 |
| Cow position: | chr18:55089144-55088675 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 306-712 |
| Cow position: | chr18:1520911-1521333 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 260 |
| Conread position: | 306-750 |
| Cow position: | chr18:33335653-33336109 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 101 |
| Conread position: | 306-750 |
| Cow position: | chr18:54172062-54171613 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 320 |
| Conread position: | 306-753 |
| Cow position: | chr18:16176825-16176364 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 306-753 |
| Cow position: | chr18:51480621-51481089 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 306-753 |
| Cow position: | chr18:54024574-54024110 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 307-751 |
| Cow position: | chr18:16533766-16534226 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 308-753 |
| Cow position: | chr18:47719781-47719334 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 111 |
| Conread position: | 313-520 |
| Cow position: | chr18:19540086-19539878 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 96 |
| Conread position: | 313-572 |
| Cow position: | chr18:51660206-51660478 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 313-753 |
| Cow position: | chr18:2019889-2019435 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 17 |
| Conread position: | 313-753 |
| Cow position: | chr18:11275306-11274856 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 10 |
| Conread position: | 313-753 |
| Cow position: | chr18:43200855-43201304 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 313-753 |
| Cow position: | chr18:51257772-51258233 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 228 |
| Conread position: | 313-753 |
| Cow position: | chr18:51310372-51310835 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 134 |
| Conread position: | 328-517 |
| Cow position: | chr18:54269274-54269460 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 328-753 |
| Cow position: | chr18:53785644-53786089 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 353-750 |
| Cow position: | chr18:29236647-29237055 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 108 |
| Conread position: | 367-683 |
| Cow position: | chr18:35288373-35288714 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 383-753 |
| Cow position: | chr18:2887164-2886772 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 396-702 |
| Cow position: | chr18:54044829-54044513 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 399-749 |
| Cow position: | chr18:51341561-51341932 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 517-753 |
| Cow position: | chr18:114401-114639 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 520-753 |
| Cow position: | chr18:25350673-25350915 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 523-753 |
| Cow position: | chr18:24040721-24040483 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 527-753 |
| Cow position: | chr18:51463059-51462828 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 537-753 |
| Cow position: | chr18:19539554-19539330 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 542-753 |
| Cow position: | chr18:32652251-32652469 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 586-753 |
| Cow position: | chr18:18089396-18089223 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 36 |
Show alignments to all cow chromosomes.