Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 295-716 |
| Cow position: | chr19:55078520-55078959 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 295-752 |
| Cow position: | chr19:171985-172464 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr19:203737-204215 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 295-753 |
| Cow position: | chr19:7488087-7488567 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 295-753 |
| Cow position: | chr19:10672532-10672052 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr19:33941386-33941863 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 453 |
| Conread position: | 295-753 |
| Cow position: | chr19:40852656-40852184 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 234 |
| Conread position: | 297-712 |
| Cow position: | chr19:42299719-42299288 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 297-753 |
| Cow position: | chr19:416430-416915 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 250 |
| Conread position: | 297-753 |
| Cow position: | chr19:772376-772853 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 297-753 |
| Cow position: | chr19:32223654-32223195 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 298-658 |
| Cow position: | chr19:29209343-29209712 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 298-753 |
| Cow position: | chr19:4385261-4385734 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 298-753 |
| Cow position: | chr19:30754954-30755434 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 299-477 |
| Cow position: | chr19:32238086-32237899 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 299-716 |
| Cow position: | chr19:378093-377689 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 299-753 |
| Cow position: | chr19:39390298-39390762 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 300-577 |
| Cow position: | chr19:4252577-4252289 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 122, 105 |
| Conread position: | 300-634 |
| Cow position: | chr19:4532960-4532625 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 13 |
| Conread position: | 300-753 |
| Cow position: | chr19:32665313-32665779 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 142 |
| Conread position: | 301-637 |
| Cow position: | chr19:32193356-32193711 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr19:76454-76015 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 301-753 |
| Cow position: | chr19:31341499-31341976 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 301-753 |
| Cow position: | chr19:32244460-32244938 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 303-608 |
| Cow position: | chr19:561713-561418 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 16 |
| Conread position: | 305-753 |
| Cow position: | chr19:170955-170493 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 287 |
| Conread position: | 305-753 |
| Cow position: | chr19:7341858-7342322 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 83 |
| Conread position: | 305-753 |
| Cow position: | chr19:28593065-28593531 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 305-753 |
| Cow position: | chr19:43143502-43143970 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 306-524 |
| Cow position: | chr19:35376340-35376563 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 306-675 |
| Cow position: | chr19:548181-548536 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 306-716 |
| Cow position: | chr19:30372068-30372487 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 306-750 |
| Cow position: | chr19:39688330-39688779 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 306-753 |
| Cow position: | chr19:893817-893361 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 307-716 |
| Cow position: | chr19:34211-34629 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 307-742 |
| Cow position: | chr19:35979055-35979508 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 307-753 |
| Cow position: | chr19:1031897-1032329 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 25 |
| Conread position: | 308-712 |
| Cow position: | chr19:20125412-20125812 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 308-753 |
| Cow position: | chr19:28581864-28581405 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 309-752 |
| Cow position: | chr19:40887858-40887403 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 313-519 |
| Cow position: | chr19:52152463-52152261 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 112, 10 |
| Conread position: | 313-642 |
| Cow position: | chr19:26984153-26983834 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 313-753 |
| Cow position: | chr19:37693-38149 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 88 |
| Conread position: | 314-750 |
| Cow position: | chr19:261232-261694 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 324-753 |
| Cow position: | chr19:39546432-39546877 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 95 |
| Conread position: | 331-721 |
| Cow position: | chr19:15953673-15954070 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 64 |
| Conread position: | 340-651 |
| Cow position: | chr19:27052943-27052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 68 |
| Conread position: | 350-747 |
| Cow position: | chr19:359672-359260 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 357-716 |
| Cow position: | chr19:543790-543413 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 359-610 |
| Cow position: | chr19:28376370-28376627 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 179 |
| Conread position: | 364-716 |
| Cow position: | chr19:10517258-10516898 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 376-753 |
| Cow position: | chr19:42248671-42249058 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 397-753 |
| Cow position: | chr19:33873304-33873680 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 400-712 |
| Cow position: | chr19:7450119-7449815 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 423-753 |
| Cow position: | chr19:6553517-6553856 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 82, 152 |
| Conread position: | 463-716 |
| Cow position: | chr19:32237736-32237469 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 515-753 |
| Cow position: | chr19:20104721-20104967 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 523-753 |
| Cow position: | chr19:687082-687318 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 524-753 |
| Cow position: | chr19:52151814-52151576 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 568-744 |
| Cow position: | chr19:35376850-35377032 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 581-753 |
| Cow position: | chr19:352917-352739 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.