Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 295-688 |
| Cow position: | chr20:21393304-21393706 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 295-751 |
| Cow position: | chr20:7116739-7116260 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr20:3270454-3270915 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 295-753 |
| Cow position: | chr20:5534673-5535148 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 295-753 |
| Cow position: | chr20:12439030-12438550 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr20:13762637-13763115 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 295-753 |
| Cow position: | chr20:21914057-21914539 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr20:25851259-25850780 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 270 |
| Conread position: | 295-753 |
| Cow position: | chr20:27868928-27869408 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 295-753 |
| Cow position: | chr20:28565869-28565385 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 297-752 |
| Cow position: | chr20:28160515-28160980 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 115 |
| Conread position: | 297-753 |
| Cow position: | chr20:23469926-23469455 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 437 |
| Conread position: | 298-645 |
| Cow position: | chr20:4799910-4799554 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 117 |
| Conread position: | 298-751 |
| Cow position: | chr20:5483927-5484398 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 299-753 |
| Cow position: | chr20:15098133-15097666 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 25 |
| Conread position: | 299-753 |
| Cow position: | chr20:24614286-24614745 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 120 |
| Conread position: | 299-753 |
| Cow position: | chr20:35119310-35119781 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 182 |
| Conread position: | 300-753 |
| Cow position: | chr20:23798617-23799097 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 301-573 |
| Cow position: | chr20:19192391-19192105 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr20:5560978-5560504 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 303-605 |
| Cow position: | chr20:28593485-28593795 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 303-656 |
| Cow position: | chr20:22717949-22717586 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 305-716 |
| Cow position: | chr20:30684081-30684505 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 305-751 |
| Cow position: | chr20:15064511-15064975 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 346 |
| Conread position: | 305-753 |
| Cow position: | chr20:22206285-22206747 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 56, 150 |
| Conread position: | 306-414 |
| Cow position: | chr20:8004771-8004663 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 306-525 |
| Cow position: | chr20:35119067-35119287 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 176 |
| Conread position: | 306-615 |
| Cow position: | chr20:10846336-10846010 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 306-646 |
| Cow position: | chr20:10102803-10102461 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 112 |
| Conread position: | 306-753 |
| Cow position: | chr20:3252390-3251923 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 235 |
| Conread position: | 306-753 |
| Cow position: | chr20:8313691-8313229 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 309-650 |
| Cow position: | chr20:35973666-35973307 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 86 |
| Conread position: | 309-653 |
| Cow position: | chr20:29572435-29572088 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 220, 21 |
| Conread position: | 313-712 |
| Cow position: | chr20:18315830-18315428 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 313-749 |
| Cow position: | chr20:19437708-19438154 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 313-753 |
| Cow position: | chr20:822501-822978 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 314-473 |
| Cow position: | chr20:3032689-3032840 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 324-751 |
| Cow position: | chr20:9954208-9953777 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 8 |
| Conread position: | 331-731 |
| Cow position: | chr20:11679342-11678921 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 335-753 |
| Cow position: | chr20:13665418-13664999 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 223, 37 |
| Conread position: | 358-568 |
| Cow position: | chr20:24390168-24390382 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 383-753 |
| Cow position: | chr20:29948338-29948710 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 397-753 |
| Cow position: | chr20:8004392-8004015 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 298 |
| Conread position: | 399-753 |
| Cow position: | chr20:15291854-15292221 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 166 |
| Conread position: | 450-753 |
| Cow position: | chr20:25960991-25961314 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 463-753 |
| Cow position: | chr20:3032965-3033272 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 517-750 |
| Cow position: | chr20:13680089-13679850 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 517-753 |
| Cow position: | chr20:3684518-3684277 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 57, 145 |
Show alignments to all cow chromosomes.