Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 293-641 |
| Cow position: | chr22:1285254-1284894 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 294-716 |
| Cow position: | chr22:8136514-8136088 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 295-498 |
| Cow position: | chr22:44456991-44457198 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 295-499 |
| Cow position: | chr22:46585634-46585428 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 295-519 |
| Cow position: | chr22:44395459-44395684 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 295-751 |
| Cow position: | chr22:17329062-17328584 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-752 |
| Cow position: | chr22:39469840-39469367 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 295-753 |
| Cow position: | chr22:561022-560549 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 295-753 |
| Cow position: | chr22:18816704-18816228 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 295-753 |
| Cow position: | chr22:19144020-19143542 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 295-753 |
| Cow position: | chr22:21589010-21589481 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 303 |
| Conread position: | 295-753 |
| Cow position: | chr22:31313022-31313498 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 295-753 |
| Cow position: | chr22:31335355-31334878 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 410 |
| Conread position: | 295-753 |
| Cow position: | chr22:34168009-34168489 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr22:36861853-36861373 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 298-453 |
| Cow position: | chr22:36534281-36534126 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 298-499 |
| Cow position: | chr22:37067228-37067031 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 298-750 |
| Cow position: | chr22:41420001-41419540 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 15 |
| Conread position: | 298-753 |
| Cow position: | chr22:118134-117685 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 118 |
| Conread position: | 298-753 |
| Cow position: | chr22:1319077-1319554 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 244 |
| Conread position: | 299-753 |
| Cow position: | chr22:1270815-1270378 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 227, 34 |
| Conread position: | 299-753 |
| Cow position: | chr22:3278672-3278197 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 299-753 |
| Cow position: | chr22:5233619-5233148 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 300-753 |
| Cow position: | chr22:5672422-5672894 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 105 |
| Conread position: | 301-643 |
| Cow position: | chr22:6984938-6985296 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-746 |
| Cow position: | chr22:46636012-46635564 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 301-750 |
| Cow position: | chr22:46853036-46853495 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 301-753 |
| Cow position: | chr22:10546334-10546802 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 301-753 |
| Cow position: | chr22:16200178-16200631 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 301-753 |
| Cow position: | chr22:24949513-24949987 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr22:44489574-44490044 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 302-708 |
| Cow position: | chr22:37265140-37265562 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 108 |
| Conread position: | 302-750 |
| Cow position: | chr22:37131335-37131798 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 302-751 |
| Cow position: | chr22:33350855-33351323 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 127 |
| Conread position: | 305-753 |
| Cow position: | chr22:1321304-1321752 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 59 |
| Conread position: | 305-753 |
| Cow position: | chr22:34598366-34598822 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 306-701 |
| Cow position: | chr22:1293803-1293395 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 306-749 |
| Cow position: | chr22:37073479-37073060 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 306-752 |
| Cow position: | chr22:7277211-7277677 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 223 |
| Conread position: | 306-753 |
| Cow position: | chr22:327460-327013 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 306-753 |
| Cow position: | chr22:27310088-27309616 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 306-753 |
| Cow position: | chr22:36736462-36736915 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 306-753 |
| Cow position: | chr22:42990860-42991329 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 306-753 |
| Cow position: | chr22:44933668-44934136 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 314 |
| Conread position: | 307-750 |
| Cow position: | chr22:44353256-44352804 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 308-716 |
| Cow position: | chr22:3307030-3306628 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 28 |
| Conread position: | 308-753 |
| Cow position: | chr22:158219-157750 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 308 |
| Conread position: | 309-751 |
| Cow position: | chr22:5307809-5308258 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 309-753 |
| Cow position: | chr22:35672664-35672199 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 333 |
| Conread position: | 310-752 |
| Cow position: | chr22:5933286-5932840 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 110 |
| Conread position: | 313-578 |
| Cow position: | chr22:10077051-10076784 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 313-716 |
| Cow position: | chr22:36267073-36267476 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 313-753 |
| Cow position: | chr22:693329-693783 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 313-753 |
| Cow position: | chr22:32485636-32485195 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 90 |
| Conread position: | 313-753 |
| Cow position: | chr22:39882476-39882019 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 63 |
| Conread position: | 313-753 |
| Cow position: | chr22:44369921-44369467 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 92 |
| Conread position: | 314-750 |
| Cow position: | chr22:15851039-15851478 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 47 |
| Conread position: | 314-751 |
| Cow position: | chr22:6503973-6503522 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 231 |
| Conread position: | 333-499 |
| Cow position: | chr22:1047096-1047260 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 336-753 |
| Cow position: | chr22:11030679-11031117 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 346-753 |
| Cow position: | chr22:44475008-44475401 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 349-753 |
| Cow position: | chr22:27283781-27284188 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 321 |
| Conread position: | 350-731 |
| Cow position: | chr22:27386698-27386296 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 351-753 |
| Cow position: | chr22:11782797-11782371 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 359-748 |
| Cow position: | chr22:44609356-44609742 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 378-753 |
| Cow position: | chr22:536862-537258 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 386-753 |
| Cow position: | chr22:871086-870709 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 161, 223 |
| Conread position: | 396-698 |
| Cow position: | chr22:12732065-12731753 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 398-753 |
| Cow position: | chr22:6020452-6020819 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 400-753 |
| Cow position: | chr22:13917287-13917660 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 410-753 |
| Cow position: | chr22:525881-525536 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 446-753 |
| Cow position: | chr22:36533907-36533586 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 517-679 |
| Cow position: | chr22:13772891-13773053 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 517-751 |
| Cow position: | chr22:46547751-46547509 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 517-753 |
| Cow position: | chr22:10909925-10909676 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 519-753 |
| Cow position: | chr22:1048326-1048560 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 123, 136 |
| Conread position: | 523-753 |
| Cow position: | chr22:20240922-20240684 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 537-753 |
| Cow position: | chr22:44396384-44396607 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 542-748 |
| Cow position: | chr22:8874929-8875141 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 542-753 |
| Cow position: | chr22:45975915-45976126 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 560-753 |
| Cow position: | chr22:309738-309935 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 568-700 |
| Cow position: | chr22:1860845-1860711 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.