Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               293-641
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               294-716
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               295-498
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 155
               

               Conread position:
               295-499
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               295-519
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               295-751
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-752
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 173
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 303
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 113
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 410
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               298-453
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               298-499
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               298-750
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 15
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 118
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 244
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               304
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               227, 34
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               301-643
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-746
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               301-750
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 119
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               302-708
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               302-750
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               302-751
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 127
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 59
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               306-701
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 13
               

               Conread position:
               306-749
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               306-752
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 223
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 314
               

               Conread position:
               307-750
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               308-716
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 28
               

               Conread position:
               308-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 308
               

               Conread position:
               309-751
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 156
               

               Conread position:
               309-753
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 333
               

               Conread position:
               310-752
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 110
               

               Conread position:
               313-578
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               109, 77
               

               Conread position:
               313-716
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 90
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 63
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 92
               

               Conread position:
               314-750
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 47
               

               Conread position:
               314-751
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 231
               

               Conread position:
               333-499
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               336-753
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               346-753
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               349-753
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 321
               

               Conread position:
               350-731
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               351-753
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 57
               

               Conread position:
               359-748
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 17
               

               Conread position:
               378-753
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               386-753
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               161, 223
               

               Conread position:
               396-698
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               398-753
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               400-753
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               410-753
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               105, 12
               

               Conread position:
               446-753
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               517-679
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               517-751
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               519-753
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               123, 136
               

               Conread position:
               523-753
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               537-753
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               542-748
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               542-753
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               560-753
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               568-700
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.