Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 295-520 |
| Cow position: | chr23:2716029-2716252 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 295-753 |
| Cow position: | chr23:967670-967193 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 421 |
| Conread position: | 295-753 |
| Cow position: | chr23:2574243-2574693 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 295-753 |
| Cow position: | chr23:2795884-2795408 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr23:4815752-4816232 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 295-753 |
| Cow position: | chr23:15525291-15525767 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 295-753 |
| Cow position: | chr23:19489218-19489699 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 295-753 |
| Cow position: | chr23:22147581-22147093 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 295-753 |
| Cow position: | chr23:27399181-27399661 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 194 |
| Conread position: | 295-753 |
| Cow position: | chr23:30636624-30636145 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 411 |
| Conread position: | 297-499 |
| Cow position: | chr23:31595496-31595294 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 298-752 |
| Cow position: | chr23:28216972-28217446 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 307 |
| Conread position: | 298-753 |
| Cow position: | chr23:5875090-5874622 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 122 |
| Conread position: | 299-500 |
| Cow position: | chr23:1330603-1330405 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 300-571 |
| Cow position: | chr23:8980805-8980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 205, 119 |
| Conread position: | 300-705 |
| Cow position: | chr23:16481667-16481268 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 36 |
| Conread position: | 300-709 |
| Cow position: | chr23:2340084-2340501 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 300-751 |
| Cow position: | chr23:988957-988493 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 287 |
| Conread position: | 300-752 |
| Cow position: | chr23:5779404-5778931 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 318 |
| Conread position: | 300-753 |
| Cow position: | chr23:1025367-1024903 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 300-753 |
| Cow position: | chr23:4276642-4277112 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 300-753 |
| Cow position: | chr23:7273344-7273788 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 61 |
| Conread position: | 301-749 |
| Cow position: | chr23:20301895-20302366 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 330 |
| Conread position: | 301-753 |
| Cow position: | chr23:31446498-31446972 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 304-584 |
| Cow position: | chr23:19017398-19017676 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 304-750 |
| Cow position: | chr23:16617163-16616692 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 305-749 |
| Cow position: | chr23:19950895-19950430 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 300 |
| Conread position: | 305-751 |
| Cow position: | chr23:4751701-4752143 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 306-750 |
| Cow position: | chr23:28913101-28913551 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 198 |
| Conread position: | 306-753 |
| Cow position: | chr23:2313549-2313083 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 324 |
| Conread position: | 306-753 |
| Cow position: | chr23:3882006-3881548 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 97 |
| Conread position: | 306-753 |
| Cow position: | chr23:22875940-22875518 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 305 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 306-753 |
| Cow position: | chr23:36031681-36031216 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 307-747 |
| Cow position: | chr23:19332705-19332257 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 25 |
| Conread position: | 308-498 |
| Cow position: | chr23:16616173-16615986 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 310-753 |
| Cow position: | chr23:15220204-15219734 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 332 |
| Conread position: | 311-753 |
| Cow position: | chr23:4434158-4434617 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 344 |
| Conread position: | 313-716 |
| Cow position: | chr23:3013331-3013762 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 313-753 |
| Cow position: | chr23:4359526-4359987 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 314-753 |
| Cow position: | chr23:2027418-2026962 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 93 |
| Conread position: | 314-753 |
| Cow position: | chr23:4640927-4640467 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 329 |
| Conread position: | 314-753 |
| Cow position: | chr23:15176772-15177231 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 375 |
| Conread position: | 317-716 |
| Cow position: | chr23:11778186-11778586 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 199 |
| Conread position: | 324-499 |
| Cow position: | chr23:2765669-2765495 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 331-598 |
| Cow position: | chr23:7750107-7750388 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 197 |
| Conread position: | 333-746 |
| Cow position: | chr23:4888397-4888823 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 233 |
| Conread position: | 366-753 |
| Cow position: | chr23:2524446-2524040 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 184 |
| Conread position: | 396-753 |
| Cow position: | chr23:14965967-14965595 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 225 |
| Conread position: | 400-753 |
| Cow position: | chr23:20156450-20156060 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 423-753 |
| Cow position: | chr23:38578099-38578434 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 472-753 |
| Cow position: | chr23:2716259-2716545 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 517-753 |
| Cow position: | chr23:2757507-2757751 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 517-753 |
| Cow position: | chr23:25684141-25683904 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 518-753 |
| Cow position: | chr23:29474639-29474400 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 519-753 |
| Cow position: | chr23:31591893-31591645 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 542-709 |
| Cow position: | chr23:10903467-10903637 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 549-753 |
| Cow position: | chr23:31595292-31595079 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 564-753 |
| Cow position: | chr23:19450221-19450412 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 14 |
Show alignments to all cow chromosomes.