Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               295-520
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               14, 186
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 421
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 194
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 411
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               298-752
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 307
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 122
               

               Conread position:
               299-500
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               300-571
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               205, 119
               

               Conread position:
               300-705
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               300-709
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               300-751
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 287
               

               Conread position:
               300-752
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 318
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 95
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 61
               

               Conread position:
               301-749
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 330
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               304-584
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               185, 33
               

               Conread position:
               304-750
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               305-749
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 300
               

               Conread position:
               305-751
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               306-750
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 198
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 324
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 103
               

               Conread position:
               307-747
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 25
               

               Conread position:
               308-498
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               310-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 332
               

               Conread position:
               311-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 344
               

               Conread position:
               313-716
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               314-753
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 93
               

               Conread position:
               314-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 329
               

               Conread position:
               314-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 375
               

               Conread position:
               317-716
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 199
               

               Conread position:
               324-499
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               331-598
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 197
               

               Conread position:
               333-746
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 233
               

               Conread position:
               366-753
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 184
               

               Conread position:
               396-753
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 225
               

               Conread position:
               400-753
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               423-753
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               472-753
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               105, 51
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               518-753
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               519-753
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               542-709
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               549-753
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               564-753
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 14
               
Show alignments to all cow chromosomes.