Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 290-454 |
| Cow position: | chr24:35990894-35990737 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 294-750 |
| Cow position: | chr24:6335458-6335923 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 294-753 |
| Cow position: | chr24:12161641-12162118 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 295-544 |
| Cow position: | chr24:13181574-13181336 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 295-753 |
| Cow position: | chr24:12085963-12086441 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 295-753 |
| Cow position: | chr24:12131718-12131243 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 295-753 |
| Cow position: | chr24:14384848-14384372 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 295-753 |
| Cow position: | chr24:19833147-19833628 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 296-716 |
| Cow position: | chr24:6351961-6352387 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 225 |
| Conread position: | 297-749 |
| Cow position: | chr24:9188966-9188492 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 297-749 |
| Cow position: | chr24:16084894-16084421 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 297-753 |
| Cow position: | chr24:33933134-33933609 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 126 |
| Conread position: | 298-716 |
| Cow position: | chr24:38635517-38635956 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 299-678 |
| Cow position: | chr24:7060870-7061264 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 230 |
| Conread position: | 300-448 |
| Cow position: | chr24:37216496-37216651 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 300-684 |
| Cow position: | chr24:17187315-17187710 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 220 |
| Conread position: | 300-753 |
| Cow position: | chr24:4415753-4415286 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 300-753 |
| Cow position: | chr24:35838857-35838373 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 301-658 |
| Cow position: | chr24:2635889-2636260 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 333 |
| Conread position: | 301-752 |
| Cow position: | chr24:33739573-33739095 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 301-753 |
| Cow position: | chr24:6025327-6024853 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr24:6083786-6084260 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr24:6434010-6434483 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 389 |
| Conread position: | 301-753 |
| Cow position: | chr24:12114261-12113803 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 18 |
| Conread position: | 301-753 |
| Cow position: | chr24:22792946-22793415 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 301-753 |
| Cow position: | chr24:44017315-44017789 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 302-751 |
| Cow position: | chr24:36707630-36708087 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 303-620 |
| Cow position: | chr24:12288949-12288624 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 199, 16 |
| Conread position: | 305-753 |
| Cow position: | chr24:12236831-12237297 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 100 |
| Conread position: | 306-709 |
| Cow position: | chr24:12224705-12224268 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 306-709 |
| Cow position: | chr24:14390947-14390540 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 306-753 |
| Cow position: | chr24:12485543-12485074 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 306-753 |
| Cow position: | chr24:12797984-12797525 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 306-753 |
| Cow position: | chr24:35841838-35841380 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 167 |
| Conread position: | 307-481 |
| Cow position: | chr24:6057450-6057625 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 307-670 |
| Cow position: | chr24:6645193-6645569 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 307-745 |
| Cow position: | chr24:8029926-8030386 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 307-753 |
| Cow position: | chr24:6537337-6537784 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 305 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 307-753 |
| Cow position: | chr24:16649524-16649074 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 216 |
| Conread position: | 308-753 |
| Cow position: | chr24:15392527-15392096 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 308-753 |
| Cow position: | chr24:36560302-36559844 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 309-630 |
| Cow position: | chr24:13531753-13531422 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 313-716 |
| Cow position: | chr24:13187970-13188387 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 99 |
| Conread position: | 316-452 |
| Cow position: | chr24:37301292-37301159 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 319-729 |
| Cow position: | chr24:39678220-39678628 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 105 |
| Conread position: | 323-716 |
| Cow position: | chr24:14873549-14873148 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 166 |
| Conread position: | 331-753 |
| Cow position: | chr24:1447370-1447799 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 175, 71 |
| Conread position: | 360-751 |
| Cow position: | chr24:17303767-17303371 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 362-753 |
| Cow position: | chr24:14584926-14585319 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 383-753 |
| Cow position: | chr24:148763-148376 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 383-753 |
| Cow position: | chr24:22951988-22952379 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 385-752 |
| Cow position: | chr24:9092419-9092040 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 222 |
| Conread position: | 388-753 |
| Cow position: | chr24:40548731-40549117 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 238 |
| Conread position: | 424-645 |
| Cow position: | chr24:35987454-35987228 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 424-708 |
| Cow position: | chr24:40654283-40654582 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 445-753 |
| Cow position: | chr24:37216919-37217243 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 230 |
| Conread position: | 523-742 |
| Cow position: | chr24:17696964-17696741 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 524-709 |
| Cow position: | chr24:6660600-6660414 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 542-753 |
| Cow position: | chr24:12335750-12335531 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 550-753 |
| Cow position: | chr24:29187319-29187526 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 556-753 |
| Cow position: | chr24:7091555-7091348 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 104, 62 |
| Conread position: | 558-753 |
| Cow position: | chr24:13524145-13524347 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 28 |
Show alignments to all cow chromosomes.