Cow genome map
| Conread name: | Lng1-LNG010086A07 |
| Conread position: | 295-497 |
| Cow position: | chr28:13522449-13522653 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-525 |
| Cow position: | chr28:34593565-34593793 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 186 |
| Conread position: | 295-591 |
| Cow position: | chr28:29819292-29819602 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-729 |
| Cow position: | chr28:26426550-26426104 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 295-751 |
| Cow position: | chr28:5565583-5566053 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 422 |
| Conread position: | 295-751 |
| Cow position: | chr28:10582263-10581787 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 361 |
| Conread position: | 295-752 |
| Cow position: | chr28:14705949-14705471 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 295-753 |
| Cow position: | chr28:782120-782596 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 295-753 |
| Cow position: | chr28:1815145-1814666 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 295-753 |
| Cow position: | chr28:2083326-2083798 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 208 |
| Conread position: | 295-753 |
| Cow position: | chr28:12150044-12150506 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 295-753 |
| Cow position: | chr28:17388203-17388683 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 295-753 |
| Cow position: | chr28:17667790-17667312 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 154 |
| Conread position: | 295-753 |
| Cow position: | chr28:22261429-22260949 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 295-753 |
| Cow position: | chr28:32792657-32792178 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 342 |
| Conread position: | 297-552 |
| Cow position: | chr28:1168439-1168174 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 128, 161 |
| Conread position: | 297-753 |
| Cow position: | chr28:1952863-1953331 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 297-753 |
| Cow position: | chr28:7001713-7002191 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 298-629 |
| Cow position: | chr28:15681619-15681951 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 116 |
| Conread position: | 298-753 |
| Cow position: | chr28:9155558-9155079 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 298-753 |
| Cow position: | chr28:34648663-34649144 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 121, 97 |
| Conread position: | 300-612 |
| Cow position: | chr28:17330793-17330472 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 300-750 |
| Cow position: | chr28:8721715-8721249 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 300-750 |
| Cow position: | chr28:21358748-21359200 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 103 |
| Conread position: | 300-751 |
| Cow position: | chr28:21325517-21325990 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 133 |
| Conread position: | 300-753 |
| Cow position: | chr28:9953863-9954334 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 315 |
| Conread position: | 300-753 |
| Cow position: | chr28:13459699-13460171 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 301-715 |
| Cow position: | chr28:15950709-15951139 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 249 |
| Conread position: | 301-753 |
| Cow position: | chr28:13441149-13440675 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 301-753 |
| Cow position: | chr28:14750276-14750748 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 264 |
| Conread position: | 305-716 |
| Cow position: | chr28:18520728-18520303 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 309 |
| Conread position: | 306-520 |
| Cow position: | chr28:5796555-5796764 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 306-712 |
| Cow position: | chr28:7816967-7817360 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 306-753 |
| Cow position: | chr28:1387657-1387198 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 306-753 |
| Cow position: | chr28:5812442-5812893 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 307-753 |
| Cow position: | chr28:6780593-6780132 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 308-517 |
| Cow position: | chr28:3774098-3773891 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 308-753 |
| Cow position: | chr28:7901092-7901556 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 13 |
| Conread position: | 309-751 |
| Cow position: | chr28:10619363-10618915 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 24 |
| Conread position: | 311-753 |
| Cow position: | chr28:7821993-7822459 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 313-753 |
| Cow position: | chr28:2591662-2592116 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 19 |
| Conread position: | 313-753 |
| Cow position: | chr28:15920725-15920263 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 313-753 |
| Cow position: | chr28:24587174-24587636 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 314-753 |
| Cow position: | chr28:8378309-8378770 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 91 |
| Conread position: | 335-753 |
| Cow position: | chr28:4381054-4380643 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 81 |
| Conread position: | 336-561 |
| Cow position: | chr28:2846729-2846508 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 182, 67 |
| Conread position: | 345-525 |
| Cow position: | chr28:5752104-5751922 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 345-699 |
| Cow position: | chr28:24652064-24652427 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 247 |
| Conread position: | 345-752 |
| Cow position: | chr28:2989909-2989516 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 72 |
| Conread position: | 345-753 |
| Cow position: | chr28:1504628-1505053 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 183 |
| Conread position: | 345-753 |
| Cow position: | chr28:3193018-3192590 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 238 |
| Conread position: | 345-753 |
| Cow position: | chr28:15378219-15377791 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 406 |
| Conread position: | 369-753 |
| Cow position: | chr28:24667378-24667781 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 377-525 |
| Cow position: | chr28:12648934-12648785 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 387-753 |
| Cow position: | chr28:12410395-12410024 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 407-753 |
| Cow position: | chr28:12233141-12232800 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 412-708 |
| Cow position: | chr28:23727290-23727003 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 417-753 |
| Cow position: | chr28:7740340-7740687 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 429-753 |
| Cow position: | chr28:7790440-7790083 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 444-753 |
| Cow position: | chr28:9137179-9136850 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 11, 107 |
| Conread position: | 517-753 |
| Cow position: | chr28:2724933-2724689 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 537-753 |
| Cow position: | chr28:22065759-22065539 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 542-753 |
| Cow position: | chr28:5751724-5751505 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 542-753 |
| Cow position: | chr28:34593961-34594180 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 581-753 |
| Cow position: | chr28:29819757-29819935 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 595-750 |
| Cow position: | chr28:5797470-5797630 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 602-753 |
| Cow position: | chr28:1931940-1931783 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.