Cow genome map
Conread name: | Lng1-LNG010086A07 |
Conread position: | 295-431 |
Cow position: | chr29:45587610-45587472 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 295-745 |
Cow position: | chr29:48788-48319 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 274 |
Conread position: | 295-751 |
Cow position: | chr29:20250847-20251324 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 465 |
Conread position: | 295-753 |
Cow position: | chr29:2689593-2690068 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 109 |
Conread position: | 295-753 |
Cow position: | chr29:2841677-2841206 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 295-753 |
Cow position: | chr29:5957291-5957771 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 116 |
Conread position: | 295-753 |
Cow position: | chr29:6266804-6266334 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 295-753 |
Cow position: | chr29:7431528-7431048 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 295-753 |
Cow position: | chr29:10648557-10648084 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 109 |
Conread position: | 295-753 |
Cow position: | chr29:10824269-10823802 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 27 |
Conread position: | 295-753 |
Cow position: | chr29:23975520-23976007 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 295-753 |
Cow position: | chr29:25932856-25932377 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 193 |
Conread position: | 295-753 |
Cow position: | chr29:26165134-26164655 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 295-753 |
Cow position: | chr29:34800118-34799641 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 63 |
Conread position: | 295-753 |
Cow position: | chr29:38226682-38227147 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 89 |
Conread position: | 295-753 |
Cow position: | chr29:39080018-39079545 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 294 |
Conread position: | 295-753 |
Cow position: | chr29:40503291-40502813 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 295-753 |
Cow position: | chr29:45459407-45459880 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 109 |
Conread position: | 296-686 |
Cow position: | chr29:21427365-21426962 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 344 |
Conread position: | 297-750 |
Cow position: | chr29:13853330-13852861 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 74 |
Conread position: | 297-753 |
Cow position: | chr29:43322250-43322722 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 438 |
Conread position: | 298-708 |
Cow position: | chr29:4635269-4634857 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 277 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 23, 14 |
Conread position: | 298-753 |
Cow position: | chr29:803634-803182 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 97 |
Conread position: | 298-753 |
Cow position: | chr29:10848423-10847925 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 15 |
Conread position: | 298-753 |
Cow position: | chr29:11048976-11049445 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 298-753 |
Cow position: | chr29:21543680-21543202 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 25 |
Conread position: | 299-746 |
Cow position: | chr29:16109420-16109887 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 245 |
Conread position: | 300-750 |
Cow position: | chr29:2750689-2750253 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 39 |
Conread position: | 301-706 |
Cow position: | chr29:28060972-28060548 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 301-741 |
Cow position: | chr29:15969454-15968996 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 141 |
Conread position: | 301-753 |
Cow position: | chr29:15895154-15894683 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 105 |
Conread position: | 301-753 |
Cow position: | chr29:32315734-32316208 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 301-753 |
Cow position: | chr29:35296571-35297041 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 73 |
Conread position: | 303-753 |
Cow position: | chr29:15950481-15950024 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 10 |
Conread position: | 304-710 |
Cow position: | chr29:16017436-16017030 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 257 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 129, 24 |
Conread position: | 305-477 |
Cow position: | chr29:2468241-2468058 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 305-694 |
Cow position: | chr29:21246267-21246674 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 305-709 |
Cow position: | chr29:36599612-36599212 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 266 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 160, 109 |
Conread position: | 305-750 |
Cow position: | chr29:9644023-9643592 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 99 |
Conread position: | 305-753 |
Cow position: | chr29:610913-610445 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 110 |
Conread position: | 306-564 |
Cow position: | chr29:12796765-12796503 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 9, 48 |
Conread position: | 306-572 |
Cow position: | chr29:31121507-31121784 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 13, 57 |
Conread position: | 306-751 |
Cow position: | chr29:19623545-19623082 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 102 |
Conread position: | 306-753 |
Cow position: | chr29:7840498-7840963 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 13 |
Conread position: | 306-753 |
Cow position: | chr29:19652807-19653275 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 306-753 |
Cow position: | chr29:32539510-32539977 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 386 |
Conread position: | 307-753 |
Cow position: | chr29:14073239-14072780 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 301 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 12, 37 |
Conread position: | 307-753 |
Cow position: | chr29:27250634-27250175 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 404 |
Conread position: | 308-753 |
Cow position: | chr29:104280-104734 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 81 |
Conread position: | 308-753 |
Cow position: | chr29:16022236-16022697 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 309-700 |
Cow position: | chr29:39313888-39313481 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 272 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 10, 119 |
Conread position: | 310-753 |
Cow position: | chr29:1714954-1715409 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 96 |
Conread position: | 313-678 |
Cow position: | chr29:31180830-31181212 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 313-751 |
Cow position: | chr29:43366289-43365827 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 23 |
Conread position: | 313-753 |
Cow position: | chr29:2099551-2100012 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 313-753 |
Cow position: | chr29:16769839-16770290 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 285 |
Conread position: | 313-753 |
Cow position: | chr29:27041053-27040602 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 107 |
Conread position: | 324-753 |
Cow position: | chr29:30811253-30811695 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 8 |
Conread position: | 324-753 |
Cow position: | chr29:35196394-35196831 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 96 |
Conread position: | 331-753 |
Cow position: | chr29:42650052-42650451 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 300 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 93, 8 |
Conread position: | 331-753 |
Cow position: | chr29:42801912-42802311 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 300 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 93, 8 |
Conread position: | 346-751 |
Cow position: | chr29:17662661-17663069 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 179 |
Conread position: | 365-753 |
Cow position: | chr29:19884829-19885237 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 393-753 |
Cow position: | chr29:27981127-27980750 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 258 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 112, 27 |
Conread position: | 450-675 |
Cow position: | chr29:5983335-5983095 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 168 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 482-753 |
Cow position: | chr29:45587469-45587193 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 113, 65 |
Conread position: | 517-753 |
Cow position: | chr29:14585851-14586089 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 177 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 60, 129 |
Conread position: | 520-753 |
Cow position: | chr29:13581998-13582236 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 523-753 |
Cow position: | chr29:670127-669890 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 52, 169 |
Conread position: | 523-753 |
Cow position: | chr29:18857015-18856777 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 175 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 556-753 |
Cow position: | chr29:12796400-12796198 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 102, 23 |
Conread position: | 581-753 |
Cow position: | chr29:410536-410358 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 134 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.