Cow genome map

Conread name: Lng1-LNG010086A07

Conread position: 295-431
Cow position: chr29:45587610-45587472 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 295-745
Cow position: chr29:48788-48319 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 274

Conread position: 295-751
Cow position: chr29:20250847-20251324 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 465

Conread position: 295-753
Cow position: chr29:2689593-2690068 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 295-753
Cow position: chr29:2841677-2841206 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 295-753
Cow position: chr29:5957291-5957771 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 116

Conread position: 295-753
Cow position: chr29:6266804-6266334 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 51

Conread position: 295-753
Cow position: chr29:7431528-7431048 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr29:10648557-10648084 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 295-753
Cow position: chr29:10824269-10823802 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 295-753
Cow position: chr29:23975520-23976007 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 295-753
Cow position: chr29:25932856-25932377 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 193

Conread position: 295-753
Cow position: chr29:26165134-26164655 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 295-753
Cow position: chr29:34800118-34799641 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 295-753
Cow position: chr29:38226682-38227147 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 89

Conread position: 295-753
Cow position: chr29:39080018-39079545 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 294

Conread position: 295-753
Cow position: chr29:40503291-40502813 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr29:45459407-45459880 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 109

Conread position: 296-686
Cow position: chr29:21427365-21426962 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 344

Conread position: 297-750
Cow position: chr29:13853330-13852861 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 297-753
Cow position: chr29:43322250-43322722 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 438

Conread position: 298-708
Cow position: chr29:4635269-4634857 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 23, 14

Conread position: 298-753
Cow position: chr29:803634-803182 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 298-753
Cow position: chr29:10848423-10847925 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 298-753
Cow position: chr29:11048976-11049445 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 298-753
Cow position: chr29:21543680-21543202 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 25

Conread position: 299-746
Cow position: chr29:16109420-16109887 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 245

Conread position: 300-750
Cow position: chr29:2750689-2750253 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 39

Conread position: 301-706
Cow position: chr29:28060972-28060548 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 301-741
Cow position: chr29:15969454-15968996 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 141

Conread position: 301-753
Cow position: chr29:15895154-15894683 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 301-753
Cow position: chr29:32315734-32316208 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 301-753
Cow position: chr29:35296571-35297041 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 303-753
Cow position: chr29:15950481-15950024 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 10

Conread position: 304-710
Cow position: chr29:16017436-16017030 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 257
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 24

Conread position: 305-477
Cow position: chr29:2468241-2468058 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 305-694
Cow position: chr29:21246267-21246674 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 305-709
Cow position: chr29:36599612-36599212 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 160, 109

Conread position: 305-750
Cow position: chr29:9644023-9643592 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 99

Conread position: 305-753
Cow position: chr29:610913-610445 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 110

Conread position: 306-564
Cow position: chr29:12796765-12796503 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 48

Conread position: 306-572
Cow position: chr29:31121507-31121784 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 57

Conread position: 306-751
Cow position: chr29:19623545-19623082 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 102

Conread position: 306-753
Cow position: chr29:7840498-7840963 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 13

Conread position: 306-753
Cow position: chr29:19652807-19653275 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 306-753
Cow position: chr29:32539510-32539977 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 386

Conread position: 307-753
Cow position: chr29:14073239-14072780 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 301
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 37

Conread position: 307-753
Cow position: chr29:27250634-27250175 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 404

Conread position: 308-753
Cow position: chr29:104280-104734 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 81

Conread position: 308-753
Cow position: chr29:16022236-16022697 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 309-700
Cow position: chr29:39313888-39313481 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 272
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 10, 119

Conread position: 310-753
Cow position: chr29:1714954-1715409 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 96

Conread position: 313-678
Cow position: chr29:31180830-31181212 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 313-751
Cow position: chr29:43366289-43365827 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 23

Conread position: 313-753
Cow position: chr29:2099551-2100012 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 313-753
Cow position: chr29:16769839-16770290 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 285

Conread position: 313-753
Cow position: chr29:27041053-27040602 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 107

Conread position: 324-753
Cow position: chr29:30811253-30811695 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 324-753
Cow position: chr29:35196394-35196831 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 331-753
Cow position: chr29:42650052-42650451 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 8

Conread position: 331-753
Cow position: chr29:42801912-42802311 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 8

Conread position: 346-751
Cow position: chr29:17662661-17663069 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 179

Conread position: 365-753
Cow position: chr29:19884829-19885237 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 393-753
Cow position: chr29:27981127-27980750 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 112, 27

Conread position: 450-675
Cow position: chr29:5983335-5983095 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 482-753
Cow position: chr29:45587469-45587193 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 65

Conread position: 517-753
Cow position: chr29:14585851-14586089 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 129

Conread position: 520-753
Cow position: chr29:13581998-13582236 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 523-753
Cow position: chr29:670127-669890 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 169

Conread position: 523-753
Cow position: chr29:18857015-18856777 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 556-753
Cow position: chr29:12796400-12796198 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 23

Conread position: 581-753
Cow position: chr29:410536-410358 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.