Cow genome map
| Conread name: | Lng1-LNG010086A07 | 
| Conread position: | 290-753 | 
| Cow position: | chr3:18357272-18356802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 212, 46 | 
| Conread position: | 292-750 | 
| Cow position: | chr3:51940801-51940339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 27 | 
| Conread position: | 293-753 | 
| Cow position: | chr3:42580360-42579882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 168 | 
| Conread position: | 294-709 | 
| Cow position: | chr3:17936457-17936027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 129, 34 | 
| Conread position: | 295-663 | 
| Cow position: | chr3:32842822-32842443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 73, 33 | 
| Conread position: | 295-707 | 
| Cow position: | chr3:21945797-21945372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 114 | 
| Conread position: | 295-751 | 
| Cow position: | chr3:30314166-30314649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 295-752 | 
| Cow position: | chr3:48061216-48060748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 30 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:594195-594661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 108 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:2711352-2710877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 146 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:5883146-5883624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:10239258-10239734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 111 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:18542802-18542323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 188 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:18811109-18811588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 101 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:21183076-21182599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 111 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:23291799-23291322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 386 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:34031291-34030814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 185 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:36882306-36881837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 109 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:38866014-38866480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 59 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:40822994-40823472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 341 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:43040086-43039621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 140 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:49545567-49545122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 111 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:56340814-56340342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 107 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:59860971-59861451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:64017758-64017279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:69933003-69933479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:72629677-72630155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 111 | 
| Conread position: | 295-753 | 
| Cow position: | chr3:78027805-78027325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 296-719 | 
| Cow position: | chr3:18729523-18729094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 47, 27 | 
| Conread position: | 297-753 | 
| Cow position: | chr3:56320918-56321400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 318 | 
| Conread position: | 298-716 | 
| Cow position: | chr3:3980000-3980434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 15 | 
| Conread position: | 298-751 | 
| Cow position: | chr3:57499900-57499447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 21 | 
| Conread position: | 298-753 | 
| Cow position: | chr3:5047572-5047099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 15 | 
| Conread position: | 298-753 | 
| Cow position: | chr3:45869588-45869132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 181, 59 | 
| Conread position: | 298-753 | 
| Cow position: | chr3:55230084-55229616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 311 | 
| Conread position: | 299-731 | 
| Cow position: | chr3:15989421-15988972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 29 | 
| Conread position: | 299-753 | 
| Cow position: | chr3:6685072-6685546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 24 | 
| Conread position: | 299-753 | 
| Cow position: | chr3:22335503-22335973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 376 | 
| Conread position: | 300-700 | 
| Cow position: | chr3:14634487-14634084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 95 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:3054224-3054681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 185, 109 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:5830017-5829544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 247 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:9716423-9716899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 133 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:50128261-50127795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 5 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:64358552-64358085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 78 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:70084031-70083567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 68 | 
| Conread position: | 300-753 | 
| Cow position: | chr3:77474374-77474846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 137 | 
| Conread position: | 301-477 | 
| Cow position: | chr3:7168216-7168393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 18, 108 | 
| Conread position: | 301-648 | 
| Cow position: | chr3:72704809-72705172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 301-716 | 
| Cow position: | chr3:37968696-37969123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 301-749 | 
| Cow position: | chr3:46678301-46677833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:2917074-2917546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:6782002-6782469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:7159131-7158648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 431 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:17829035-17828564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 105 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:24314090-24314554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 319 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:32146473-32146005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:41212126-41211652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:45032353-45032826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 243 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:47179592-47179118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 409 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:57856348-57856822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:64028471-64028001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 112 | 
| Conread position: | 301-753 | 
| Cow position: | chr3:64650244-64650710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 282 | 
| Conread position: | 302-753 | 
| Cow position: | chr3:46861685-46861218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 303-520 | 
| Cow position: | chr3:52865132-52864917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 11, 59 | 
| Conread position: | 303-753 | 
| Cow position: | chr3:2653724-2654192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 103 | 
| Conread position: | 303-753 | 
| Cow position: | chr3:57485109-57484644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 75 | 
| Conread position: | 305-753 | 
| Cow position: | chr3:14440111-14439676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 67 | 
| Conread position: | 305-753 | 
| Cow position: | chr3:26949133-26949597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 59 | 
| Conread position: | 305-753 | 
| Cow position: | chr3:42431849-42432316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 305-753 | 
| Cow position: | chr3:49614360-49613892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 306-499 | 
| Cow position: | chr3:39326308-39326499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 12, 94 | 
| Conread position: | 306-525 | 
| Cow position: | chr3:40340344-40340126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 13, 98 | 
| Conread position: | 306-525 | 
| Cow position: | chr3:49677379-49677596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 11, 40 | 
| Conread position: | 306-684 | 
| Cow position: | chr3:24591993-24591628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 31 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:5954570-5954101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:19757343-19756874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 179 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:19878279-19878743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 238 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:19938530-19938970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 218 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:31354636-31354180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 27 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:32623386-32622950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 13, 32 | 
| Conread position: | 306-753 | 
| Cow position: | chr3:66119276-66119740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 24 | 
| Conread position: | 307-573 | 
| Cow position: | chr3:56650645-56650371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 194, 83 | 
| Conread position: | 307-750 | 
| Cow position: | chr3:50914924-50915388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 17 | 
| Conread position: | 307-753 | 
| Cow position: | chr3:3522632-3523106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 307-753 | 
| Cow position: | chr3:45775450-45775012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 12, 26 | 
| Conread position: | 308-674 | 
| Cow position: | chr3:63005530-63005144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 83 | 
| Conread position: | 309-673 | 
| Cow position: | chr3:4285506-4285887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 309-753 | 
| Cow position: | chr3:58947077-58947543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 80 | 
| Conread position: | 310-655 | 
| Cow position: | chr3:7322938-7323292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 103, 175 | 
| Conread position: | 310-702 | 
| Cow position: | chr3:80871529-80871925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 104 | 
| Conread position: | 311-750 | 
| Cow position: | chr3:48231359-48230930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 14 | 
| Conread position: | 311-751 | 
| Cow position: | chr3:207538-207078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 182 | 
| Conread position: | 311-753 | 
| Cow position: | chr3:31898350-31897892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 192 | 
| Conread position: | 311-753 | 
| Cow position: | chr3:47082034-47081573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 13 | 
| Conread position: | 313-525 | 
| Cow position: | chr3:36691564-36691355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 9, 93 | 
| Conread position: | 313-572 | 
| Cow position: | chr3:17951985-17952258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 7, 21 | 
| Conread position: | 313-716 | 
| Cow position: | chr3:53410548-53410957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 157, 19 | 
| Conread position: | 313-753 | 
| Cow position: | chr3:472163-472617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 49 | 
| Conread position: | 313-753 | 
| Cow position: | chr3:54865066-54864614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 63 | 
| Conread position: | 313-753 | 
| Cow position: | chr3:66891336-66890878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 70 | 
| Conread position: | 315-753 | 
| Cow position: | chr3:2633555-2634010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 112 | 
| Conread position: | 323-753 | 
| Cow position: | chr3:3805994-3806424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 96 | 
| Conread position: | 323-753 | 
| Cow position: | chr3:18463941-18463507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 199, 66 | 
| Conread position: | 331-753 | 
| Cow position: | chr3:60210533-60210093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 56, 77 | 
| Conread position: | 332-753 | 
| Cow position: | chr3:4026919-4027357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 84 | 
| Conread position: | 333-753 | 
| Cow position: | chr3:75041518-75041083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 70 | 
| Conread position: | 336-753 | 
| Cow position: | chr3:66990451-66990871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 131 | 
| Conread position: | 343-750 | 
| Cow position: | chr3:19943720-19944132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 8 | 
| Conread position: | 343-753 | 
| Cow position: | chr3:15177967-15178396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 78, 33 | 
| Conread position: | 345-753 | 
| Cow position: | chr3:66638396-66638825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 354-753 | 
| Cow position: | chr3:14754627-14754212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 23 | 
| Conread position: | 355-753 | 
| Cow position: | chr3:56097207-56097610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 180, 84 | 
| Conread position: | 359-708 | 
| Cow position: | chr3:49333072-49333423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 207, 57 | 
| Conread position: | 370-503 | 
| Cow position: | chr3:2909412-2909278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 370-708 | 
| Cow position: | chr3:63242040-63241719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 146, 56 | 
| Conread position: | 388-574 | 
| Cow position: | chr3:57900915-57901114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 393-753 | 
| Cow position: | chr3:7168498-7168878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 6, 173 | 
| Conread position: | 396-750 | 
| Cow position: | chr3:29594911-29595276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 129 | 
| Conread position: | 396-753 | 
| Cow position: | chr3:54783251-54783629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 110, 27 | 
| Conread position: | 414-753 | 
| Cow position: | chr3:34093697-34093364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 10, 87 | 
| Conread position: | 415-753 | 
| Cow position: | chr3:18859149-18859500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 10, 26 | 
| Conread position: | 427-753 | 
| Cow position: | chr3:53515359-53515698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 82, 6 | 
| Conread position: | 445-746 | 
| Cow position: | chr3:66619936-66620251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 77, 144 | 
| Conread position: | 452-750 | 
| Cow position: | chr3:19802423-19802733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 6, 192 | 
| Conread position: | 517-753 | 
| Cow position: | chr3:23214220-23213977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 60, 137 | 
| Conread position: | 517-753 | 
| Cow position: | chr3:26822652-26822424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 174, 53 | 
| Conread position: | 518-750 | 
| Cow position: | chr3:52864631-52864384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 537-725 | 
| Cow position: | chr3:13518420-13518228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 537-746 | 
| Cow position: | chr3:49137679-49137462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 539-750 | 
| Cow position: | chr3:2908489-2908275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 76, 31 | 
| Conread position: | 541-750 | 
| Cow position: | chr3:39326584-39326799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 117, 49 | 
| Conread position: | 541-753 | 
| Cow position: | chr3:49677652-49677871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 36, 89 | 
| Conread position: | 561-751 | 
| Cow position: | chr3:45895673-45895475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 561-751 | 
| Cow position: | chr3:45974382-45974580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 568-753 | 
| Cow position: | chr3:40157611-40157421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 90, 122 | 
| Conread position: | 573-716 | 
| Cow position: | chr3:68700070-68699925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 594-753 | 
| Cow position: | chr3:77423601-77423760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 64, 108 | 
Show alignments to all cow chromosomes.
