Cow genome map

Conread name: Lng1-LNG010086A07

Conread position: 293-753
Cow position: chr4:6215144-6214669 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 45

Conread position: 294-753
Cow position: chr4:29532304-29531825 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 411

Conread position: 295-451
Cow position: chr4:46712931-46712773 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 295-607
Cow position: chr4:1050210-1049881 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-688
Cow position: chr4:31668727-31669129 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 95

Conread position: 295-751
Cow position: chr4:44724493-44724971 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr4:355325-355799 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 110

Conread position: 295-753
Cow position: chr4:4905563-4906036 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 204

Conread position: 295-753
Cow position: chr4:6490936-6490475 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 208

Conread position: 295-753
Cow position: chr4:12241810-12241328 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 295-753
Cow position: chr4:13491986-13492465 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 457

Conread position: 295-753
Cow position: chr4:16359302-16359773 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 295-753
Cow position: chr4:17926844-17926365 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr4:24445789-24445311 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 295-753
Cow position: chr4:36895784-36896259 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 314

Conread position: 295-753
Cow position: chr4:43320226-43319756 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 381

Conread position: 295-753
Cow position: chr4:43880520-43880998 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 38

Conread position: 295-753
Cow position: chr4:45049885-45049408 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 295-753
Cow position: chr4:48025812-48026287 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 233

Conread position: 297-752
Cow position: chr4:41330853-41331326 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 292

Conread position: 298-642
Cow position: chr4:11383831-11384177 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 21

Conread position: 298-753
Cow position: chr4:496521-496068 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 300
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 226, 6

Conread position: 299-749
Cow position: chr4:16056018-16056487 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 300-572
Cow position: chr4:10408193-10408482 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 300-753
Cow position: chr4:8598715-8598267 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 89

Conread position: 300-753
Cow position: chr4:21338564-21338113 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 58

Conread position: 301-571
Cow position: chr4:23114760-23114476 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 301-709
Cow position: chr4:3125197-3125619 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 264

Conread position: 301-716
Cow position: chr4:33493227-33493657 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 314

Conread position: 301-753
Cow position: chr4:602413-602883 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 105

Conread position: 301-753
Cow position: chr4:1931204-1930734 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 337

Conread position: 301-753
Cow position: chr4:13547444-13547919 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 301-753
Cow position: chr4:47764754-47764281 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 454

Conread position: 301-753
Cow position: chr4:65224118-65223644 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 305-753
Cow position: chr4:528414-528883 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 305-753
Cow position: chr4:18425096-18424635 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 98

Conread position: 305-753
Cow position: chr4:30308032-30307569 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 97

Conread position: 305-753
Cow position: chr4:32211588-32212057 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 306-753
Cow position: chr4:3961016-3961481 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 102

Conread position: 306-753
Cow position: chr4:11393910-11393456 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 22

Conread position: 306-753
Cow position: chr4:18516317-18516786 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 306-753
Cow position: chr4:66925426-66925886 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 67

Conread position: 307-708
Cow position: chr4:40824823-40824412 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 118

Conread position: 307-716
Cow position: chr4:1464498-1464076 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 106

Conread position: 307-753
Cow position: chr4:101507-101043 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 277

Conread position: 307-753
Cow position: chr4:39272516-39272046 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 36

Conread position: 308-753
Cow position: chr4:34185434-34184990 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 310-748
Cow position: chr4:46663629-46664076 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 116

Conread position: 313-524
Cow position: chr4:27442518-27442731 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 313-750
Cow position: chr4:28830468-28830916 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 313-753
Cow position: chr4:5879607-5880055 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 313-753
Cow position: chr4:6269199-6268738 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 218

Conread position: 315-753
Cow position: chr4:66179554-66179098 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 17

Conread position: 324-525
Cow position: chr4:54190302-54190497 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 331-753
Cow position: chr4:157963-158405 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 101

Conread position: 335-525
Cow position: chr4:1371559-1371373 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 341-573
Cow position: chr4:12608044-12607803 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 91, 20

Conread position: 347-753
Cow position: chr4:25600148-25599729 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 356-753
Cow position: chr4:27332926-27333325 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 52

Conread position: 359-503
Cow position: chr4:33630524-33630670 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 371-753
Cow position: chr4:26887356-26886973 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 373-753
Cow position: chr4:47718120-47717717 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 381-707
Cow position: chr4:969542-969204 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 85

Conread position: 383-709
Cow position: chr4:40406085-40405754 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 104

Conread position: 385-716
Cow position: chr4:24198696-24198365 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 115

Conread position: 387-748
Cow position: chr4:1497249-1496874 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 164

Conread position: 396-753
Cow position: chr4:11618374-11618743 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 396-753
Cow position: chr4:57979143-57979518 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 227

Conread position: 397-753
Cow position: chr4:33073584-33073220 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 182

Conread position: 403-708
Cow position: chr4:21564667-21564961 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 7

Conread position: 441-709
Cow position: chr4:30283221-30283492 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 59

Conread position: 459-753
Cow position: chr4:60264984-60264678 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 84

Conread position: 491-753
Cow position: chr4:23493363-23493626 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 78

Conread position: 517-751
Cow position: chr4:41119659-41119901 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 537-753
Cow position: chr4:12586964-12587188 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 87

Conread position: 543-753
Cow position: chr4:61256568-61256781 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 30, 179

Conread position: 568-716
Cow position: chr4:4176128-4176278 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 568-753
Cow position: chr4:9355072-9354881 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.