Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               293-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               320
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               294-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 411
               

               Conread position:
               295-451
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-607
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-688
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 95
               

               Conread position:
               295-751
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 110
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 204
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 208
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 457
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 314
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 381
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 233
               

               Conread position:
               297-752
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 292
               

               Conread position:
               298-642
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               300
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               226, 6
               

               Conread position:
               299-749
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               300-572
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 89
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 58
               

               Conread position:
               301-571
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               301-709
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 264
               

               Conread position:
               301-716
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 314
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 337
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 454
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 98
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 97
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 102
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 22
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               307-708
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 118
               

               Conread position:
               307-716
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 277
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               308-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               310-748
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 116
               

               Conread position:
               313-524
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               313-750
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 218
               

               Conread position:
               315-753
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 17
               

               Conread position:
               324-525
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               331-753
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 101
               

               Conread position:
               335-525
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               341-573
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               347-753
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               356-753
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               359-503
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               371-753
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 111
               

               Conread position:
               373-753
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               381-707
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               383-709
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               385-716
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               387-748
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 164
               

               Conread position:
               396-753
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               396-753
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               29, 227
               

               Conread position:
               397-753
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 182
               

               Conread position:
               403-708
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               441-709
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               459-753
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               491-753
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               517-751
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               537-753
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               543-753
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               30, 179
               

               Conread position:
               568-716
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               568-753
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.