Cow genome map


           Conread name:
           Lng1-LNG010086A07
        

               Conread position:
               292-716
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 198
               

               Conread position:
               294-710
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               294-751
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               294-753
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               295-525
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-620
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               295-702
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               296
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               295-716
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               295-746
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 235
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 251
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 297
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               295-753
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 331
               

               Conread position:
               298-499
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               187, 34
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 191
               

               Conread position:
               298-753
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               299-753
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               300-688
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 319
               

               Conread position:
               300-716
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 245
               

               Conread position:
               300-750
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 153
               

               Conread position:
               300-752
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 117
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 118
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 103
               

               Conread position:
               300-753
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               301-706
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 262
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 104
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               301-753
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               302-753
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               303-752
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 121
               

               Conread position:
               303-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               304-753
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 137
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               305-753
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               231, 96
               

               Conread position:
               306-472
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               12, 114
               

               Conread position:
               306-484
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 17
               

               Conread position:
               306-693
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 115
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               306-753
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 17
               

               Conread position:
               307-691
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               307-709
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 146
               

               Conread position:
               307-709
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               170, 25
               

               Conread position:
               307-753
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               12, 177
               

               Conread position:
               308-753
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               311-753
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 11
               

               Conread position:
               311-753
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 101
               

               Conread position:
               312-746
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               313-477
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 126
               

               Conread position:
               313-686
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 277
               

               Conread position:
               313-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 86
               

               Conread position:
               314-525
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               323-695
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               324-709
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               324-753
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 422
               

               Conread position:
               331-753
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               331-753
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               133, 64
               

               Conread position:
               333-753
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               346-753
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               350-749
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 64
               

               Conread position:
               376-525
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               376-749
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 181
               

               Conread position:
               376-751
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               377-753
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               383-753
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               395-753
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               396-753
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               397-750
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               398-716
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               159, 210
               

               Conread position:
               400-749
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               402-656
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               404-753
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               408-753
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               427-753
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 141
               

               Conread position:
               435-716
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               454-753
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               517-753
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               518-753
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               537-750
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               542-753
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               551-716
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               599-753
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.