Cow genome map

Conread name: Lng1-LNG010086A07

Conread position: 292-716
Cow position: chr7:993969-994410 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 198

Conread position: 294-710
Cow position: chr7:32189733-32189338 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 270
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 9

Conread position: 294-751
Cow position: chr7:750660-751130 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 294-753
Cow position: chr7:19925076-19924607 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 110

Conread position: 295-525
Cow position: chr7:522108-521876 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 295-620
Cow position: chr7:51911615-51911274 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 145

Conread position: 295-702
Cow position: chr7:27144078-27144486 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 37

Conread position: 295-716
Cow position: chr7:64242200-64241773 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 295-746
Cow position: chr7:34485646-34486122 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 235

Conread position: 295-753
Cow position: chr7:1372913-1372436 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 295-753
Cow position: chr7:1400618-1400144 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 295-753
Cow position: chr7:1449231-1449700 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 295-753
Cow position: chr7:8145501-8145028 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 251

Conread position: 295-753
Cow position: chr7:14139860-14139385 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr7:21127914-21127446 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 295-753
Cow position: chr7:27786368-27786839 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 116

Conread position: 295-753
Cow position: chr7:34148846-34149314 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 295-753
Cow position: chr7:45949411-45948934 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 295-753
Cow position: chr7:46902340-46901864 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 297

Conread position: 295-753
Cow position: chr7:54602586-54603067 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 295-753
Cow position: chr7:55538180-55537701 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 96

Conread position: 295-753
Cow position: chr7:67798588-67799067 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 331

Conread position: 298-499
Cow position: chr7:29469612-29469806 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 187, 34

Conread position: 298-753
Cow position: chr7:23835862-23836336 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 7, 33

Conread position: 298-753
Cow position: chr7:36085072-36085552 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 298-753
Cow position: chr7:41870186-41869730 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 299-753
Cow position: chr7:11446297-11446772 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 299-753
Cow position: chr7:27102370-27101898 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 151

Conread position: 300-499
Cow position: chr7:67426162-67426361 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 124, 24

Conread position: 300-688
Cow position: chr7:68436304-68435898 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 319

Conread position: 300-716
Cow position: chr7:21975993-21975562 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 245

Conread position: 300-750
Cow position: chr7:3154524-3154979 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 153

Conread position: 300-752
Cow position: chr7:27125912-27126371 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 117

Conread position: 300-753
Cow position: chr7:21235271-21234796 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 300-753
Cow position: chr7:35287815-35287344 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 118

Conread position: 300-753
Cow position: chr7:48633148-48633593 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 103

Conread position: 300-753
Cow position: chr7:67416783-67417260 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 301-706
Cow position: chr7:47374739-47375162 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 301-753
Cow position: chr7:17130-16656 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 301-753
Cow position: chr7:3234941-3234467 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 301-753
Cow position: chr7:6643130-6642661 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 301-753
Cow position: chr7:6648911-6648439 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 262

Conread position: 301-753
Cow position: chr7:23816224-23815754 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 104

Conread position: 301-753
Cow position: chr7:54515371-54514907 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 300
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 26, 42

Conread position: 301-753
Cow position: chr7:61558955-61559429 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 302-753
Cow position: chr7:68858350-68857897 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 127

Conread position: 303-752
Cow position: chr7:63020599-63021063 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 10

Conread position: 303-753
Cow position: chr7:5662123-5662590 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 25

Conread position: 303-753
Cow position: chr7:6489563-6489103 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 121

Conread position: 303-753
Cow position: chr7:26025783-26026251 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 20

Conread position: 304-753
Cow position: chr7:11466988-11466523 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 137

Conread position: 305-753
Cow position: chr7:3301407-3300938 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 305-753
Cow position: chr7:51084371-51084818 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 231, 96

Conread position: 306-472
Cow position: chr7:35297847-35297683 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 114

Conread position: 306-484
Cow position: chr7:39108967-39108791 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 17

Conread position: 306-693
Cow position: chr7:20307040-20306655 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 17

Conread position: 306-753
Cow position: chr7:1357919-1357470 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 115

Conread position: 306-753
Cow position: chr7:21309958-21310421 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 306-753
Cow position: chr7:21985147-21985615 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 60

Conread position: 306-753
Cow position: chr7:24808721-24808251 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 306-753
Cow position: chr7:26890554-26891022 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 57

Conread position: 306-753
Cow position: chr7:38536274-38536724 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 17

Conread position: 307-691
Cow position: chr7:26883879-26884275 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 23

Conread position: 307-709
Cow position: chr7:102853-102436 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 146

Conread position: 307-709
Cow position: chr7:24056041-24056447 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 170, 25

Conread position: 307-753
Cow position: chr7:59136179-59136623 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 177

Conread position: 308-753
Cow position: chr7:446885-446415 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 52

Conread position: 311-753
Cow position: chr7:20799676-20799226 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 11

Conread position: 311-753
Cow position: chr7:51013716-51014168 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 101

Conread position: 312-746
Cow position: chr7:25439283-25439715 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 103

Conread position: 313-477
Cow position: chr7:38396983-38397141 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 126

Conread position: 313-686
Cow position: chr7:68778623-68778231 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 277

Conread position: 313-753
Cow position: chr7:1611445-1610995 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 86

Conread position: 314-525
Cow position: chr7:39791493-39791708 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 323-695
Cow position: chr7:61349798-61349429 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 24

Conread position: 324-709
Cow position: chr7:53990511-53990896 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 324-753
Cow position: chr7:33406477-33406026 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 422

Conread position: 331-753
Cow position: chr7:20555492-20555930 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 331-753
Cow position: chr7:39556314-39555880 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 290
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 64

Conread position: 333-753
Cow position: chr7:10431649-10431202 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 346-753
Cow position: chr7:26893538-26893966 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 350-749
Cow position: chr7:20528882-20528463 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 376-525
Cow position: chr7:21241974-21241828 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 376-749
Cow position: chr7:7257026-7257407 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 376-751
Cow position: chr7:52120262-52119871 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 172

Conread position: 377-753
Cow position: chr7:41489938-41490327 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 125

Conread position: 383-753
Cow position: chr7:21319981-21320372 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 395-753
Cow position: chr7:47050540-47050899 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 32, 109

Conread position: 396-753
Cow position: chr7:13537745-13537367 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 397-750
Cow position: chr7:68907686-68908040 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 42

Conread position: 398-716
Cow position: chr7:65496956-65496640 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 159, 210

Conread position: 400-749
Cow position: chr7:62442908-62442534 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 11

Conread position: 402-656
Cow position: chr7:545058-545323 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 404-753
Cow position: chr7:68479013-68479383 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 408-753
Cow position: chr7:26925185-26924823 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 8

Conread position: 427-753
Cow position: chr7:29370709-29370367 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 141

Conread position: 435-716
Cow position: chr7:68328559-68328847 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 71

Conread position: 454-753
Cow position: chr7:35297374-35297055 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 0

Conread position: 517-753
Cow position: chr7:33878393-33878155 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 84

Conread position: 518-753
Cow position: chr7:68778173-68777937 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 38

Conread position: 537-750
Cow position: chr7:39108236-39108027 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 40

Conread position: 542-753
Cow position: chr7:39791752-39791971 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 551-716
Cow position: chr7:30302055-30302221 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 28

Conread position: 599-753
Cow position: chr7:60463205-60463365 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.