Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-283 |
| Cow position: | chr1:75184898-75185174 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 7 |
| Conread position: | 1-285 |
| Cow position: | chr1:98413066-98412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 16 |
| Conread position: | 1-286 |
| Cow position: | chr1:80315039-80315318 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 7 |
| Conread position: | 3-168 |
| Cow position: | chr1:84245773-84245605 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-267 |
| Cow position: | chr1:638154-638422 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 8-142 |
| Cow position: | chr1:69722357-69722490 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 8-143 |
| Cow position: | chr1:86302099-86301966 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 8-177 |
| Cow position: | chr1:29107538-29107365 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-181 |
| Cow position: | chr1:47365223-47365397 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-209 |
| Cow position: | chr1:17635057-17634854 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 176 |
| Conread position: | 8-276 |
| Cow position: | chr1:79839741-79839483 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 8-285 |
| Cow position: | chr1:48321625-48321363 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 8-285 |
| Cow position: | chr1:87757599-87757333 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 8-285 |
| Cow position: | chr1:88767835-88768100 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 8-285 |
| Cow position: | chr1:91026015-91026280 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 8-285 |
| Cow position: | chr1:98880043-98879765 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 9-273 |
| Cow position: | chr1:32284649-32284904 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 9-291 |
| Cow position: | chr1:57084195-57083928 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 9-292 |
| Cow position: | chr1:32496179-32496450 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 10-153 |
| Cow position: | chr1:10194441-10194298 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 10-273 |
| Cow position: | chr1:57267172-57266915 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 10-285 |
| Cow position: | chr1:89776875-89776604 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 167 |
| Conread position: | 11-277 |
| Cow position: | chr1:76596042-76596323 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 12-199 |
| Cow position: | chr1:30086434-30086250 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 12-297 |
| Cow position: | chr1:93431106-93431372 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 134 |
| Conread position: | 14-126 |
| Cow position: | chr1:55120712-55120601 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 16-161 |
| Cow position: | chr1:21014727-21014580 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 21-270 |
| Cow position: | chr1:32964850-32965097 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 240, 23 |
| Conread position: | 21-285 |
| Cow position: | chr1:78027872-78027610 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 159 |
| Conread position: | 27-202 |
| Cow position: | chr1:77942882-77942708 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 173, 114 |
| Conread position: | 40-282 |
| Cow position: | chr1:5655435-5655198 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 214, 48 |
| Conread position: | 41-286 |
| Cow position: | chr1:29099882-29099637 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 205, 140 |
| Conread position: | 49-215 |
| Cow position: | chr1:100140334-100140501 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 51-272 |
| Cow position: | chr1:55117760-55117982 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 211, 130 |
| Conread position: | 74-286 |
| Cow position: | chr1:101441116-101440910 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 181, 107 |
| Conread position: | 77-287 |
| Cow position: | chr1:64752824-64753023 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 102-285 |
| Cow position: | chr1:35434784-35434967 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 113-287 |
| Cow position: | chr1:22590081-22590254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 117-287 |
| Cow position: | chr1:55120381-55120219 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 15 |
| Conread position: | 122-285 |
| Cow position: | chr1:15983067-15982909 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 133, 63 |
Show alignments to all cow chromosomes.