Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-200 |
| Cow position: | chr10:27305960-27306158 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 1-256 |
| Cow position: | chr10:42349347-42349101 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 247, 7 |
| Conread position: | 1-285 |
| Cow position: | chr10:63684806-63685091 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 1-285 |
| Cow position: | chr10:65367007-65366731 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-286 |
| Cow position: | chr10:68375504-68375234 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 254, 7 |
| Conread position: | 1-291 |
| Cow position: | chr10:23859862-23860156 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 7 |
| Conread position: | 2-172 |
| Cow position: | chr10:51686577-51686754 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-291 |
| Cow position: | chr10:932258-931970 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 252, 114 |
| Conread position: | 8-270 |
| Cow position: | chr10:349908-349651 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 8-276 |
| Cow position: | chr10:16732756-16732495 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 8-285 |
| Cow position: | chr10:32912594-32912871 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 8-285 |
| Cow position: | chr10:32983464-32983182 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 8-285 |
| Cow position: | chr10:40718032-40717760 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 8-286 |
| Cow position: | chr10:27687460-27687737 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 8-286 |
| Cow position: | chr10:66000686-66000419 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 8-287 |
| Cow position: | chr10:69628485-69628207 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 8-294 |
| Cow position: | chr10:60611052-60610776 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 9-281 |
| Cow position: | chr10:36211385-36211110 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 10-280 |
| Cow position: | chr10:27686630-27686894 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 10-285 |
| Cow position: | chr10:33720615-33720898 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 10-298 |
| Cow position: | chr10:32421221-32420930 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 11-299 |
| Cow position: | chr10:21388237-21387942 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 15-292 |
| Cow position: | chr10:838161-838435 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 16-144 |
| Cow position: | chr10:62890710-62890582 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 17-290 |
| Cow position: | chr10:52419923-52420187 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 196, 83 |
| Conread position: | 22-285 |
| Cow position: | chr10:12404832-12405093 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 24-285 |
| Cow position: | chr10:1036617-1036362 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 36-270 |
| Cow position: | chr10:62892468-62892245 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 219, 9 |
| Conread position: | 59-285 |
| Cow position: | chr10:52449997-52450228 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 165, 27 |
| Conread position: | 82-295 |
| Cow position: | chr10:7730533-7730325 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 100-277 |
| Cow position: | chr10:9862176-9862007 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 100-285 |
| Cow position: | chr10:133357-133179 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 155, 27 |
| Conread position: | 102-286 |
| Cow position: | chr10:25926830-25927012 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 152, 5 |
Show alignments to all cow chromosomes.