Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-156 |
| Cow position: | chr11:39241452-39241302 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-200 |
| Cow position: | chr11:36258799-36258987 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-239 |
| Cow position: | chr11:63678430-63678199 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-276 |
| Cow position: | chr11:51842278-51842539 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 2-285 |
| Cow position: | chr11:39243040-39242762 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 6 |
| Conread position: | 5-285 |
| Cow position: | chr11:37356168-37356442 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 7-132 |
| Cow position: | chr11:7550199-7550325 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-156 |
| Cow position: | chr11:37729250-37729106 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 8-272 |
| Cow position: | chr11:6604969-6604705 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 174 |
| Conread position: | 8-273 |
| Cow position: | chr11:11682932-11682664 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 8-279 |
| Cow position: | chr11:18167349-18167608 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 247, 19 |
| Conread position: | 8-280 |
| Cow position: | chr11:4127522-4127256 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 8-284 |
| Cow position: | chr11:20423497-20423225 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 173 |
| Conread position: | 8-285 |
| Cow position: | chr11:5144337-5144608 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 8-285 |
| Cow position: | chr11:31888481-31888204 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 8-286 |
| Cow position: | chr11:36901307-36901589 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 8-286 |
| Cow position: | chr11:75070550-75070813 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 9-270 |
| Cow position: | chr11:67774766-67774519 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 10-285 |
| Cow position: | chr11:9806391-9806657 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 11-283 |
| Cow position: | chr11:37125201-37125471 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 13-170 |
| Cow position: | chr11:32391132-32390979 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 13-286 |
| Cow position: | chr11:39234785-39234516 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 168 |
| Conread position: | 15-167 |
| Cow position: | chr11:39204247-39204098 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 15-181 |
| Cow position: | chr11:72346991-72347156 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 15-285 |
| Cow position: | chr11:41483239-41483498 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 34 |
| Conread position: | 16-231 |
| Cow position: | chr11:7050134-7050346 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 18-295 |
| Cow position: | chr11:37330144-37329873 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-286 |
| Cow position: | chr11:85953472-85953222 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 235, 87 |
| Conread position: | 34-291 |
| Cow position: | chr11:881498-881750 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 147 |
| Conread position: | 49-286 |
| Cow position: | chr11:19703346-19703109 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 53-288 |
| Cow position: | chr11:37398904-37399130 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 89-285 |
| Cow position: | chr11:5252402-5252598 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 166, 92 |
| Conread position: | 89-287 |
| Cow position: | chr11:5187624-5187427 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 166, 89 |
Show alignments to all cow chromosomes.