Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-182 |
| Cow position: | chr16:3854275-3854450 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-204 |
| Cow position: | chr16:33709800-33709602 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-285 |
| Cow position: | chr16:20985040-20984754 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 7 |
| Conread position: | 1-286 |
| Cow position: | chr16:200492-200221 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 7 |
| Conread position: | 3-263 |
| Cow position: | chr16:7770433-7770178 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 3-286 |
| Cow position: | chr16:8786669-8786952 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 8-283 |
| Cow position: | chr16:1632707-1632436 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 8-285 |
| Cow position: | chr16:22240391-22240123 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 8-285 |
| Cow position: | chr16:34131381-34131653 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 8-287 |
| Cow position: | chr16:26065698-26065417 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 9-271 |
| Cow position: | chr16:37842337-37842089 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 9-286 |
| Cow position: | chr16:33147818-33147548 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 58 |
| Conread position: | 10-238 |
| Cow position: | chr16:32029492-32029270 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 12-285 |
| Cow position: | chr16:49778688-49778934 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 243, 15 |
| Conread position: | 14-285 |
| Cow position: | chr16:2710844-2710590 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 210, 149 |
| Conread position: | 17-276 |
| Cow position: | chr16:19262155-19262411 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 19-292 |
| Cow position: | chr16:50545607-50545877 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 20-233 |
| Cow position: | chr16:27974595-27974808 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 22-276 |
| Cow position: | chr16:43162629-43162871 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 202, 74 |
| Conread position: | 31-283 |
| Cow position: | chr16:35411969-35412214 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 51-206 |
| Cow position: | chr16:23384550-23384393 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 56-287 |
| Cow position: | chr16:56224030-56223804 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 80-273 |
| Cow position: | chr16:43196441-43196254 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 88-285 |
| Cow position: | chr16:46377257-46377443 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 167, 78 |
| Conread position: | 92-291 |
| Cow position: | chr16:10250724-10250528 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 163, 89 |
| Conread position: | 95-285 |
| Cow position: | chr16:54409359-54409174 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 161, 39 |
| Conread position: | 100-285 |
| Cow position: | chr16:44522987-44522807 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 85 |
| Conread position: | 112-307 |
| Cow position: | chr16:10444300-10444106 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 143, 73 |
| Conread position: | 113-285 |
| Cow position: | chr16:22245534-22245365 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 114-285 |
| Cow position: | chr16:30563362-30563195 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 67 |
| Conread position: | 114-285 |
| Cow position: | chr16:31703599-31703432 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 77 |
| Conread position: | 129-285 |
| Cow position: | chr16:36429990-36429839 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 128, 52 |
Show alignments to all cow chromosomes.