Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-287 |
| Cow position: | chr17:4879152-4879435 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 7 |
| Conread position: | 1-292 |
| Cow position: | chr17:1325196-1325473 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 7 |
| Conread position: | 2-288 |
| Cow position: | chr17:1730193-1730478 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 3-221 |
| Cow position: | chr17:24997411-24997193 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 5, 179 |
| Conread position: | 7-287 |
| Cow position: | chr17:1756979-1756699 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 8-223 |
| Cow position: | chr17:22823022-22822814 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 8-230 |
| Cow position: | chr17:20347341-20347124 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 8-284 |
| Cow position: | chr17:27302388-27302112 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 8-285 |
| Cow position: | chr17:1491224-1491501 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 8-285 |
| Cow position: | chr17:21591811-21591539 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 252, 15 |
| Conread position: | 8-285 |
| Cow position: | chr17:27761150-27761417 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 8-286 |
| Cow position: | chr17:11244444-11244717 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 8-288 |
| Cow position: | chr17:24584117-24583850 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 9-122 |
| Cow position: | chr17:34053776-34053889 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-238 |
| Cow position: | chr17:41950325-41950544 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 9-273 |
| Cow position: | chr17:10636448-10636179 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 9-283 |
| Cow position: | chr17:24861611-24861881 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 247, 108 |
| Conread position: | 9-285 |
| Cow position: | chr17:11072233-11072506 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 9-285 |
| Cow position: | chr17:31562388-31562113 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 9-297 |
| Cow position: | chr17:16359903-16360188 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 9-309 |
| Cow position: | chr17:21585674-21585375 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 174 |
| Conread position: | 10-284 |
| Cow position: | chr17:17641912-17641634 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 11-177 |
| Cow position: | chr17:25148140-25147974 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-287 |
| Cow position: | chr17:25546275-25546000 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 167 |
| Conread position: | 14-182 |
| Cow position: | chr17:16379444-16379277 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 20-284 |
| Cow position: | chr17:38189943-38189688 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 23-268 |
| Cow position: | chr17:891721-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 210, 32 |
| Conread position: | 29-285 |
| Cow position: | chr17:15483774-15483523 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 151 |
| Conread position: | 57-308 |
| Cow position: | chr17:21461130-21461377 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 58-298 |
| Cow position: | chr17:16380561-16380320 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 88-235 |
| Cow position: | chr17:5347951-5347805 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 93-284 |
| Cow position: | chr17:11124388-11124198 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 102-266 |
| Cow position: | chr17:43730472-43730630 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 107-286 |
| Cow position: | chr17:6763136-6763318 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 115-285 |
| Cow position: | chr17:22836161-22835990 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 66 |
Show alignments to all cow chromosomes.