Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-182 |
| Cow position: | chr21:41688014-41687846 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 1-287 |
| Cow position: | chr21:24735450-24735159 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-321 |
| Cow position: | chr21:43626777-43626446 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 2-182 |
| Cow position: | chr21:41569470-41569292 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 8-185 |
| Cow position: | chr21:24238034-24238213 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-216 |
| Cow position: | chr21:6326718-6326510 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 147 |
| Conread position: | 8-266 |
| Cow position: | chr21:41548162-41547914 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 8-276 |
| Cow position: | chr21:44721880-44722142 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 8-283 |
| Cow position: | chr21:47963529-47963258 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 8-285 |
| Cow position: | chr21:41532360-41532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 52 |
| Conread position: | 8-285 |
| Cow position: | chr21:42475304-42475028 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 146 |
| Conread position: | 8-294 |
| Cow position: | chr21:9207035-9206768 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 9-168 |
| Cow position: | chr21:7074234-7074076 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 9-254 |
| Cow position: | chr21:17933883-17933628 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 9-292 |
| Cow position: | chr21:20186245-20185956 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 10-199 |
| Cow position: | chr21:12898580-12898766 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 10-278 |
| Cow position: | chr21:7143675-7143421 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 10-285 |
| Cow position: | chr21:20786064-20785786 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 10-286 |
| Cow position: | chr21:23639736-23639453 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 11-285 |
| Cow position: | chr21:8851049-8851327 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 11-285 |
| Cow position: | chr21:15249817-15250082 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 26-285 |
| Cow position: | chr21:25592870-25592619 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 229, 54 |
| Conread position: | 49-180 |
| Cow position: | chr21:7747584-7747714 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 58-297 |
| Cow position: | chr21:1184771-1184537 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 197, 30 |
| Conread position: | 76-285 |
| Cow position: | chr21:29200622-29200830 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 81-286 |
| Cow position: | chr21:24207624-24207826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 88-285 |
| Cow position: | chr21:34428408-34428602 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 167, 18 |
| Conread position: | 88-286 |
| Cow position: | chr21:20172582-20172390 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 98-285 |
| Cow position: | chr21:42169456-42169637 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 157, 83 |
| Conread position: | 102-286 |
| Cow position: | chr21:46767162-46766974 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 126, 79 |
Show alignments to all cow chromosomes.