Cow genome map


           Conread name:
           Lng1-LNG010099H09
        

               Conread position:
               8-273
               

               Cow position:
               chr24:113382-113135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               240, 49
               

               Conread position:
               8-283
               

               Cow position:
               chr24:5916510-5916788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               8-285
               

               Cow position:
               chr24:39510920-39511187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               9-287
               

               Cow position:
               chr24:18049200-18049465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               10-277
               

               Cow position:
               chr24:40560864-40560607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               245, 19
               

               Conread position:
               10-278
               

               Cow position:
               chr24:27743326-27743065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               10-291
               

               Cow position:
               chr24:30265440-30265163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               15-309
               

               Cow position:
               chr24:8399086-8398802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               240, 12
               

               Conread position:
               86-267
               

               Cow position:
               chr24:2930350-2930169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               172, 160
               

               Conread position:
               87-285
               

               Cow position:
               chr24:39798821-39798624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               88-285
               

               Cow position:
               chr24:28760428-28760621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               166, 92
               

               Conread position:
               100-292
               

               Cow position:
               chr24:21129420-21129611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               122, 34
               
Show alignments to all cow chromosomes.