Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-182 |
| Cow position: | chr3:36543733-36543907 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-267 |
| Cow position: | chr3:22703119-22702865 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 256, 7 |
| Conread position: | 1-283 |
| Cow position: | chr3:69220143-69220414 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 254, 7 |
| Conread position: | 1-285 |
| Cow position: | chr3:4126819-4127095 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 1-285 |
| Cow position: | chr3:28926144-28926409 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 1-285 |
| Cow position: | chr3:37255969-37256246 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 16 |
| Conread position: | 1-288 |
| Cow position: | chr3:75076985-75077254 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 254, 26 |
| Conread position: | 3-285 |
| Cow position: | chr3:63270925-63270649 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 8-181 |
| Cow position: | chr3:58594719-58594544 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-264 |
| Cow position: | chr3:9255470-9255229 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 8-286 |
| Cow position: | chr3:14185514-14185237 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 8-287 |
| Cow position: | chr3:3643421-3643699 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 8-287 |
| Cow position: | chr3:19230173-19229906 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 8-287 |
| Cow position: | chr3:36415904-36416185 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 10-156 |
| Cow position: | chr3:33567857-33567999 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 11-285 |
| Cow position: | chr3:19236524-19236255 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 13-285 |
| Cow position: | chr3:7837452-7837711 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 237, 14 |
| Conread position: | 13-292 |
| Cow position: | chr3:26586174-26586440 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 242, 14 |
| Conread position: | 24-171 |
| Cow position: | chr3:51413261-51413113 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 25-277 |
| Cow position: | chr3:52026567-52026812 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 7 |
| Conread position: | 31-283 |
| Cow position: | chr3:7865363-7865116 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 50-286 |
| Cow position: | chr3:23938413-23938651 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 51-294 |
| Cow position: | chr3:22699731-22699496 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 88-294 |
| Cow position: | chr3:2682746-2682943 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 165, 29 |
| Conread position: | 89-286 |
| Cow position: | chr3:74797379-74797574 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 166, 47 |
| Conread position: | 92-282 |
| Cow position: | chr3:5052333-5052145 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 163, 46 |
| Conread position: | 120-283 |
| Cow position: | chr3:45839610-45839448 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 124-291 |
| Cow position: | chr3:33568037-33568200 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 159-287 |
| Cow position: | chr3:58594330-58594203 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 98, 26 |
Show alignments to all cow chromosomes.