Cow genome map
| Conread name: | Lng1-LNG010099H09 |
| Conread position: | 1-285 |
| Cow position: | chr5:17044251-17043974 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 254, 7 |
| Conread position: | 3-262 |
| Cow position: | chr5:68391518-68391771 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 215, 5 |
| Conread position: | 4-201 |
| Cow position: | chr5:19004457-19004261 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 8-180 |
| Cow position: | chr5:24886877-24887050 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 8-276 |
| Cow position: | chr5:30412639-30412897 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 8-283 |
| Cow position: | chr5:8763526-8763799 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 8-283 |
| Cow position: | chr5:47997226-47996955 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 241, 89 |
| Conread position: | 8-285 |
| Cow position: | chr5:46862483-46862210 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 24 |
| Conread position: | 9-183 |
| Cow position: | chr5:59088021-59088200 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 9-283 |
| Cow position: | chr5:18778017-18777749 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 56 |
| Conread position: | 9-298 |
| Cow position: | chr5:40699337-40699056 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 12-180 |
| Cow position: | chr5:24893319-24893487 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 70, 102 |
| Conread position: | 13-180 |
| Cow position: | chr5:47960645-47960489 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 30-199 |
| Cow position: | chr5:12785274-12785106 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 103 |
| Conread position: | 31-269 |
| Cow position: | chr5:44888169-44888408 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 69, 96 |
| Conread position: | 36-272 |
| Cow position: | chr5:22847155-22846924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 222, 5 |
| Conread position: | 48-285 |
| Cow position: | chr5:27990774-27990542 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 134 |
| Conread position: | 82-285 |
| Cow position: | chr5:67964579-67964777 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 166, 54 |
| Conread position: | 88-285 |
| Cow position: | chr5:31568308-31568111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 166, 137 |
| Conread position: | 89-285 |
| Cow position: | chr5:2187178-2186986 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 167, 57 |
| Conread position: | 127-285 |
| Cow position: | chr5:33715343-33715186 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 54 |
Show alignments to all cow chromosomes.